RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 CSF1RP07333 972 aa16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 CYP19A1P11511 503 aaPredicted RBP16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 H2AFXP16104 143 aaPredicted RBP16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 KRT32Q14532 448 aa16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 NECAB1Q8N987 351 aa16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 FAM89AQ96GI7 184 aa16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 CEP126Q9P2H0 1117 aa16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 CLIP2Q9UDT6 1046 aa16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 EXOC5O00471 708 aa16.28■□□□□ 0.2
RABGGTA-220ENST00000560998 TUBB4AP04350 444 aa16.28■□□□□ 0.2
RABGGTA-220ENST00000560998 SARM1Q6SZW1 724 aa16.28■□□□□ 0.2
RABGGTA-220ENST00000560998 LUZP1Q86V48 1076 aa16.28■□□□□ 0.2
RABGGTA-220ENST00000560998 KAT6BQ8WYB5 2073 aa16.28■□□□□ 0.2
RABGGTA-220ENST00000560998 HNRNPH2P55795 449 aaKnown RBP16.27■□□□□ 0.2
RABGGTA-220ENST00000560998 TPM4P67936 248 aa16.27■□□□□ 0.2
RABGGTA-220ENST00000560998 TOB2Q14106 344 aaPredicted RBP16.27■□□□□ 0.2
RABGGTA-220ENST00000560998 ELF2Q15723 593 aa16.27■□□□□ 0.2
RABGGTA-220ENST00000560998 HLFQ16534 295 aa16.27■□□□□ 0.2
RABGGTA-220ENST00000560998 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.27■□□□□ 0.2
RABGGTA-220ENST00000560998 CACTINQ8WUQ7 758 aaKnown RBP16.27■□□□□ 0.2
RABGGTA-220ENST00000560998 TCEANC2Q96MN5 208 aa16.27■□□□□ 0.2
RABGGTA-220ENST00000560998 HELLSQ9NRZ9 838 aa16.27■□□□□ 0.2
RABGGTA-220ENST00000560998 MTMR6Q9Y217 621 aa16.27■□□□□ 0.2
RABGGTA-220ENST00000560998 CDHR2Q9BYE9 1310 aa16.27■□□□□ 0.2
RABGGTA-220ENST00000560998 IFIT1P09914 478 aaKnown RBP16.27■□□□□ 0.19
RABGGTA-220ENST00000560998 KRT85P78386 507 aa16.27■□□□□ 0.19
RABGGTA-220ENST00000560998 DNM1Q05193 864 aaKnown RBP16.27■□□□□ 0.19
RABGGTA-220ENST00000560998 RAD51AP2Q09MP3 1159 aa16.27■□□□□ 0.19
RABGGTA-220ENST00000560998 CTR9Q6PD62 1173 aa16.27■□□□□ 0.19
RABGGTA-220ENST00000560998 LRRC8AQ8IWT6 810 aa16.27■□□□□ 0.19
RABGGTA-220ENST00000560998 MRFAP1L1Q96HT8 127 aa16.27■□□□□ 0.19
RABGGTA-220ENST00000560998 ANO6Q4KMQ2 910 aa16.26■□□□□ 0.19
RABGGTA-220ENST00000560998 HSP90AB3PQ58FF7 597 aa16.26■□□□□ 0.19
RABGGTA-220ENST00000560998 ZMYM1Q5SVZ6 1142 aa16.26■□□□□ 0.19
RABGGTA-220ENST00000560998 NLRP10Q86W26 655 aa16.26■□□□□ 0.19
RABGGTA-220ENST00000560998 ZNF592Q92610 1267 aa16.26■□□□□ 0.19
RABGGTA-220ENST00000560998 TNMDQ9H2S6 317 aa16.26■□□□□ 0.19
RABGGTA-220ENST00000560998 DOT1LQ8TEK3 1739 aa16.26■□□□□ 0.19
RABGGTA-220ENST00000560998 IFIT5Q13325 482 aaKnown RBP16.26■□□□□ 0.19
RABGGTA-220ENST00000560998 NEK1Q96PY6 1258 aa16.26■□□□□ 0.19
RABGGTA-220ENST00000560998 ZNF446Q9NWS9 450 aa16.26■□□□□ 0.19
RABGGTA-220ENST00000560998 NRBP1Q9UHY1 535 aa16.26■□□□□ 0.19
RABGGTA-220ENST00000560998 AKAP2Q9Y2D5 859 aa16.26■□□□□ 0.19
RABGGTA-220ENST00000560998 NUP98P52948 1817 aa16.25■□□□□ 0.19
RABGGTA-220ENST00000560998 ATP8B1O43520 1251 aa16.25■□□□□ 0.19
RABGGTA-220ENST00000560998 DTNBO60941 627 aa16.25■□□□□ 0.19
RABGGTA-220ENST00000560998 CYP21A2P08686 494 aa16.25■□□□□ 0.19
RABGGTA-220ENST00000560998 GPTP24298 496 aa16.25■□□□□ 0.19
RABGGTA-220ENST00000560998 CCDC85AQ96PX6 553 aaPredicted RBP16.25■□□□□ 0.19
RABGGTA-220ENST00000560998 L2HGDHQ9H9P8 463 aa16.25■□□□□ 0.19
RABGGTA-220ENST00000560998 ZBTB1Q9Y2K1 713 aa16.25■□□□□ 0.19
RABGGTA-220ENST00000560998 MYH3P11055 1940 aa16.25■□□□□ 0.19
RABGGTA-220ENST00000560998 ADORA1P30542 326 aa16.24■□□□□ 0.19
RABGGTA-220ENST00000560998 SYNE4Q8N205 404 aa16.24■□□□□ 0.19
RABGGTA-220ENST00000560998 DSCC1Q9BVC3 393 aa16.24■□□□□ 0.19
RABGGTA-220ENST00000560998 CLSTN2Q9H4D0 955 aa16.24■□□□□ 0.19
RABGGTA-220ENST00000560998 LAMA4Q16363 1823 aa16.24■□□□□ 0.19
RABGGTA-220ENST00000560998 RIC1Q4ADV7 1423 aa16.24■□□□□ 0.19
RABGGTA-220ENST00000560998 RNF113AO15541 343 aaKnown RBP16.24■□□□□ 0.19
RABGGTA-220ENST00000560998 SYTL4Q96C24 671 aaPredicted RBP16.24■□□□□ 0.19
RABGGTA-220ENST00000560998 XAGE2Q96GT9 111 aa16.24■□□□□ 0.19
RABGGTA-220ENST00000560998 RASSF4Q9H2L5 321 aa16.24■□□□□ 0.19
RABGGTA-220ENST00000560998 ARGLU1Q9NWB6 273 aaPredicted RBP16.24■□□□□ 0.19
RABGGTA-220ENST00000560998 FHOD1Q9Y613 1164 aa16.24■□□□□ 0.19
RABGGTA-220ENST00000560998 NRAPQ86VF7 1730 aa16.23■□□□□ 0.19
RABGGTA-220ENST00000560998 CCDC158Q5M9N0 1113 aa16.23■□□□□ 0.19
RABGGTA-220ENST00000560998 MAST3O60307 1309 aa16.23■□□□□ 0.19
RABGGTA-220ENST00000560998 GPS2Q13227 327 aa16.22■□□□□ 0.19
RABGGTA-220ENST00000560998 DHX8Q14562 1220 aaKnown RBP16.22■□□□□ 0.19
RABGGTA-220ENST00000560998 TTC39AQ5SRH9 613 aa16.22■□□□□ 0.19
RABGGTA-220ENST00000560998 FILIP1Q7Z7B0 1213 aa16.22■□□□□ 0.19
RABGGTA-220ENST00000560998 TEX2Q8IWB9 1127 aa16.22■□□□□ 0.19
RABGGTA-220ENST00000560998 TTLL11Q8NHH1 800 aa16.22■□□□□ 0.19
RABGGTA-220ENST00000560998 SCAND2PQ9GZW5 306 aaPredicted RBP16.22■□□□□ 0.19
RABGGTA-220ENST00000560998 V9GYY5 206 aaPredicted RBP16.22■□□□□ 0.19
RABGGTA-220ENST00000560998 ERVV-1B6SEH8 477 aa16.22■□□□□ 0.19
RABGGTA-220ENST00000560998 IL6STP40189 918 aaPredicted RBP16.22■□□□□ 0.19
RABGGTA-220ENST00000560998 ZNF165P49910 485 aa16.22■□□□□ 0.19
RABGGTA-220ENST00000560998 CTSWP56202 376 aa16.22■□□□□ 0.19
RABGGTA-220ENST00000560998 CCDC144BQ3MJ40 725 aa16.22■□□□□ 0.19
RABGGTA-220ENST00000560998 GORABQ5T7V8 394 aa16.22■□□□□ 0.19
RABGGTA-220ENST00000560998 STOX1Q6ZVD7 989 aa16.22■□□□□ 0.19
RABGGTA-220ENST00000560998 CCDC144CPQ8IYA2 1237 aa16.22■□□□□ 0.19
RABGGTA-220ENST00000560998 CCAR2Q8N163 923 aaKnown RBP16.22■□□□□ 0.19
RABGGTA-220ENST00000560998 CDCA7Q9BWT1 371 aaPredicted RBP16.22■□□□□ 0.19
RABGGTA-220ENST00000560998 CWC15Q9P013 229 aaKnown RBP16.22■□□□□ 0.19
RABGGTA-220ENST00000560998 RIPOR2Q9Y4F9 1068 aa16.22■□□□□ 0.19
RABGGTA-220ENST00000560998 VPS37CA5D8V6 355 aaPredicted RBP16.21■□□□□ 0.19
RABGGTA-220ENST00000560998 PNMA6AP0CW24 399 aaPredicted RBP16.21■□□□□ 0.19
RABGGTA-220ENST00000560998 SKILP12757 684 aa16.21■□□□□ 0.19
RABGGTA-220ENST00000560998 TNNT3P45378 269 aaPredicted RBP16.21■□□□□ 0.19
RABGGTA-220ENST00000560998 GSDMDP57764 484 aa16.21■□□□□ 0.19
RABGGTA-220ENST00000560998 LARP1BQ659C4 914 aaKnown RBP16.21■□□□□ 0.19
RABGGTA-220ENST00000560998 Q6ZUG5 572 aa16.21■□□□□ 0.19
RABGGTA-220ENST00000560998 TTC6Q86TZ1 520 aa16.21■□□□□ 0.19
RABGGTA-220ENST00000560998 GREM2Q9H772 168 aa16.21■□□□□ 0.19
RABGGTA-220ENST00000560998 ST7Q9NRC1 585 aa16.21■□□□□ 0.19
RABGGTA-220ENST00000560998 SPATA31A1Q5TZJ5 1347 aa16.21■□□□□ 0.19
RABGGTA-220ENST00000560998 M0R2C6 588 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms