RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 CCDC146Q8IYE0 955 aa11.59□□□□□ -0.55
RABGGTA-217ENST00000560521 CERS5Q8N5B7 392 aa11.59□□□□□ -0.55
RABGGTA-217ENST00000560521 MTMR14Q8NCE2 650 aa11.59□□□□□ -0.55
RABGGTA-217ENST00000560521 MS4A4AQ96JQ5 239 aa11.59□□□□□ -0.55
RABGGTA-217ENST00000560521 COL6A3P12111 3177 aa11.59□□□□□ -0.55
RABGGTA-217ENST00000560521 AOX1Q06278 1338 aa11.59□□□□□ -0.55
RABGGTA-217ENST00000560521 MYCP01106 439 aaPredicted RBP11.58□□□□□ -0.56
RABGGTA-217ENST00000560521 IREB2P48200 963 aaKnown RBP11.58□□□□□ -0.56
RABGGTA-217ENST00000560521 SUPT20HL1Q3ZLR7 823 aa11.58□□□□□ -0.56
RABGGTA-217ENST00000560521 ANKRD13AQ8IZ07 590 aa11.58□□□□□ -0.56
RABGGTA-217ENST00000560521 PRMT6Q96LA8 375 aaPredicted RBP11.58□□□□□ -0.56
RABGGTA-217ENST00000560521 MBIPQ9NS73 344 aa11.58□□□□□ -0.56
RABGGTA-217ENST00000560521 RBM27Q9P2N5 1060 aaKnown RBP11.58□□□□□ -0.56
RABGGTA-217ENST00000560521 PPP2R3BQ9Y5P8 575 aa11.58□□□□□ -0.56
RABGGTA-217ENST00000560521 DOCK3Q8IZD9 2030 aa11.58□□□□□ -0.56
RABGGTA-217ENST00000560521 ZNF804BA4D1E1 1349 aa11.58□□□□□ -0.56
RABGGTA-217ENST00000560521 AK9Q5TCS8 1911 aa11.57□□□□□ -0.56
RABGGTA-217ENST00000560521 CLRN2A0PK11 232 aa11.57□□□□□ -0.56
RABGGTA-217ENST00000560521 CD209Q9NNX6 404 aa11.57□□□□□ -0.56
RABGGTA-217ENST00000560521 RANBP2P49792 3224 aaKnown RBP11.57□□□□□ -0.56
RABGGTA-217ENST00000560521 ELL2O00472 640 aaPredicted RBP11.56□□□□□ -0.56
RABGGTA-217ENST00000560521 IGKV5-2P06315 115 aa11.56□□□□□ -0.56
RABGGTA-217ENST00000560521 CFAP100Q494V2 611 aa11.56□□□□□ -0.56
RABGGTA-217ENST00000560521 SLC17A8Q8NDX2 589 aa11.56□□□□□ -0.56
RABGGTA-217ENST00000560521 SH3TC2Q8TF17 1288 aa11.56□□□□□ -0.56
RABGGTA-217ENST00000560521 BRI3BPQ8WY22 251 aa11.56□□□□□ -0.56
RABGGTA-217ENST00000560521 OPTNQ96CV9 577 aa11.56□□□□□ -0.56
RABGGTA-217ENST00000560521 ELP3Q9H9T3 547 aa11.56□□□□□ -0.56
RABGGTA-217ENST00000560521 MAP3K2Q9Y2U5 619 aa11.56□□□□□ -0.56
RABGGTA-217ENST00000560521 IRS2Q9Y4H2 1338 aa11.56□□□□□ -0.56
RABGGTA-217ENST00000560521 SPDYE2BA6NHP3 402 aa11.55□□□□□ -0.56
RABGGTA-217ENST00000560521 F8W031 263 aaPredicted RBP11.55□□□□□ -0.56
RABGGTA-217ENST00000560521 SNAP23O00161 211 aa11.55□□□□□ -0.56
RABGGTA-217ENST00000560521 ZNF853P0CG23 659 aa11.55□□□□□ -0.56
RABGGTA-217ENST00000560521 SPDYE6P0CI01 402 aa11.55□□□□□ -0.56
RABGGTA-217ENST00000560521 RASA3Q14644 834 aa11.55□□□□□ -0.56
RABGGTA-217ENST00000560521 ARHGEF6Q15052 776 aa11.55□□□□□ -0.56
RABGGTA-217ENST00000560521 TAF1CQ15572 869 aaPredicted RBP11.55□□□□□ -0.56
RABGGTA-217ENST00000560521 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.55□□□□□ -0.56
RABGGTA-217ENST00000560521 CNKSR2Q8WXI2 1034 aa11.55□□□□□ -0.56
RABGGTA-217ENST00000560521 RUNDC1Q96C34 613 aa11.55□□□□□ -0.56
RABGGTA-217ENST00000560521 ARHGAP39Q9C0H5 1083 aa11.55□□□□□ -0.56
RABGGTA-217ENST00000560521 ANKRD2Q9GZV1 360 aa11.55□□□□□ -0.56
RABGGTA-217ENST00000560521 PRO3102Q9H379 93 aa11.55□□□□□ -0.56
RABGGTA-217ENST00000560521 VEZTQ9HBM0 779 aa11.55□□□□□ -0.56
RABGGTA-217ENST00000560521 ZFYVE28Q9HCC9 887 aa11.55□□□□□ -0.56
RABGGTA-217ENST00000560521 CCL15-CCL14A0A0B4J2E2 113 aa11.54□□□□□ -0.56
RABGGTA-217ENST00000560521 MYO1BO43795 1136 aa11.54□□□□□ -0.56
RABGGTA-217ENST00000560521 IGHMBP2P38935 993 aaKnown RBP11.54□□□□□ -0.56
RABGGTA-217ENST00000560521 CCL15Q16663 113 aa11.54□□□□□ -0.56
RABGGTA-217ENST00000560521 FAM43AQ8N2R8 423 aa11.54□□□□□ -0.56
RABGGTA-217ENST00000560521 DPF3Q92784 378 aa11.54□□□□□ -0.56
RABGGTA-217ENST00000560521 SHISA4Q96DD7 197 aa11.54□□□□□ -0.56
RABGGTA-217ENST00000560521 H7C1W4 665 aa11.53□□□□□ -0.56
RABGGTA-217ENST00000560521 DDX58O95786 925 aaKnown RBP11.53□□□□□ -0.56
RABGGTA-217ENST00000560521 ITGA6P23229 1130 aa11.53□□□□□ -0.56
RABGGTA-217ENST00000560521 CHRNDQ07001 517 aa11.53□□□□□ -0.56
RABGGTA-217ENST00000560521 MTFR1Q15390 333 aa11.53□□□□□ -0.56
RABGGTA-217ENST00000560521 CWF19L2Q2TBE0 894 aaKnown RBP11.53□□□□□ -0.56
RABGGTA-217ENST00000560521 KSR2Q6VAB6 950 aa11.53□□□□□ -0.56
RABGGTA-217ENST00000560521 C8orf58Q8NAV2 365 aa11.53□□□□□ -0.56
RABGGTA-217ENST00000560521 PI4KAP2A4QPH2 592 aa11.52□□□□□ -0.57
RABGGTA-217ENST00000560521 TAF5LO75529 589 aa11.52□□□□□ -0.57
RABGGTA-217ENST00000560521 IL1R1P14778 569 aa11.52□□□□□ -0.57
RABGGTA-217ENST00000560521 GTF2A2P52657 109 aa11.52□□□□□ -0.57
RABGGTA-217ENST00000560521 FKBP1AP62942 108 aaKnown RBP11.52□□□□□ -0.57
RABGGTA-217ENST00000560521 CDAN1Q8IWY9 1227 aa11.52□□□□□ -0.57
RABGGTA-217ENST00000560521 PI4KAP1Q8N8J0 262 aa11.52□□□□□ -0.57
RABGGTA-217ENST00000560521 TEPSINQ96N21 525 aa11.52□□□□□ -0.57
RABGGTA-217ENST00000560521 MPHOSPH8Q99549 860 aa11.52□□□□□ -0.57
RABGGTA-217ENST00000560521 PLA2G12BQ9BX93 195 aa11.52□□□□□ -0.57
RABGGTA-217ENST00000560521 NEURL1BA8MQ27 555 aa11.51□□□□□ -0.57
RABGGTA-217ENST00000560521 TLR2O60603 784 aa11.51□□□□□ -0.57
RABGGTA-217ENST00000560521 CSF1RP07333 972 aa11.51□□□□□ -0.57
RABGGTA-217ENST00000560521 CTGFP29279 349 aa11.51□□□□□ -0.57
RABGGTA-217ENST00000560521 KCNJ4P48050 445 aa11.51□□□□□ -0.57
RABGGTA-217ENST00000560521 RBM5P52756 815 aaKnown RBP eCLIP11.51□□□□□ -0.57
RABGGTA-217ENST00000560521 MAP3K9P80192 1104 aa11.51□□□□□ -0.57
RABGGTA-217ENST00000560521 LACTBP83111 547 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-217ENST00000560521 SPDYE2Q495Y8 402 aa11.51□□□□□ -0.57
RABGGTA-217ENST00000560521 C15orf52Q6ZUT6 534 aaKnown RBP11.51□□□□□ -0.57
RABGGTA-217ENST00000560521 UBE3BQ7Z3V4 1068 aa11.51□□□□□ -0.57
RABGGTA-217ENST00000560521 UBE2Q1Q7Z7E8 422 aa11.51□□□□□ -0.57
RABGGTA-217ENST00000560521 HELBQ8NG08 1087 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-217ENST00000560521 ZNF70Q9UC06 446 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-217ENST00000560521 JAG2Q9Y219 1238 aa11.51□□□□□ -0.57
RABGGTA-217ENST00000560521 MYH13Q9UKX3 1938 aa11.5□□□□□ -0.57
RABGGTA-217ENST00000560521 CASP7P55210 303 aa11.5□□□□□ -0.57
RABGGTA-217ENST00000560521 VGLL4Q14135 290 aa11.5□□□□□ -0.57
RABGGTA-217ENST00000560521 KIF22Q14807 665 aa11.5□□□□□ -0.57
RABGGTA-217ENST00000560521 RALBP1Q15311 655 aa11.5□□□□□ -0.57
RABGGTA-217ENST00000560521 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.5□□□□□ -0.571e-6■□□□□ 11.1
RABGGTA-217ENST00000560521 TDRD3Q9H7E2 651 aaKnown RBP11.5□□□□□ -0.57
RABGGTA-217ENST00000560521 ADAMTS8Q9UP79 889 aa11.5□□□□□ -0.57
RABGGTA-217ENST00000560521 LAMA3Q16787 3333 aa11.49□□□□□ -0.57
RABGGTA-217ENST00000560521 PTPRFP10586 1907 aa11.49□□□□□ -0.57
RABGGTA-217ENST00000560521 SOX1O00570 391 aaPredicted RBP11.49□□□□□ -0.57
RABGGTA-217ENST00000560521 ECM2O94769 699 aaPredicted RBP11.49□□□□□ -0.57
RABGGTA-217ENST00000560521 GNRH1P01148 92 aa11.49□□□□□ -0.57
RABGGTA-217ENST00000560521 PRMT2P55345 433 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms