RNA–Protein interactions for RNA: ENST00000560350.5

USP3-AS1-206, USP3 antisense RNA 1, humanhuman

TSL 2

Gene USP3-AS1, Length 407 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-206ENST00000560350 AMIGO3Q86WK7 504 aa9.87□□□□□ -0.83
USP3-AS1-206ENST00000560350 ZSCAN1Q8NBB4 408 aa9.87□□□□□ -0.83
USP3-AS1-206ENST00000560350 CHMP4AQ9BY43 222 aa9.87□□□□□ -0.83
USP3-AS1-206ENST00000560350 DOT1LQ8TEK3 1739 aa9.87□□□□□ -0.83
USP3-AS1-206ENST00000560350 GRIN3BO60391 1043 aa9.86□□□□□ -0.83
USP3-AS1-206ENST00000560350 PPFIA3O75145 1194 aa9.86□□□□□ -0.83
USP3-AS1-206ENST00000560350 MMP10P09238 476 aa9.86□□□□□ -0.83
USP3-AS1-206ENST00000560350 CANXP27824 592 aaKnown RBP9.86□□□□□ -0.83
USP3-AS1-206ENST00000560350 RFC5P40937 340 aa9.86□□□□□ -0.83
USP3-AS1-206ENST00000560350 TGFB2P61812 414 aa9.86□□□□□ -0.83
USP3-AS1-206ENST00000560350 INTS6LQ5JSJ4 861 aaKnown RBP9.86□□□□□ -0.83
USP3-AS1-206ENST00000560350 ADAM32Q8TC27 787 aa9.86□□□□□ -0.83
USP3-AS1-206ENST00000560350 ZBTB1Q9Y2K1 713 aa9.86□□□□□ -0.83
USP3-AS1-206ENST00000560350 USP42Q9H9J4 1324 aaKnown RBP9.85□□□□□ -0.83
USP3-AS1-206ENST00000560350 LY75O60449 1722 aa9.85□□□□□ -0.83
USP3-AS1-206ENST00000560350 KCNQ3O43525 872 aa9.85□□□□□ -0.83
USP3-AS1-206ENST00000560350 GIGYF1O75420 1035 aaPredicted RBP9.85□□□□□ -0.83
USP3-AS1-206ENST00000560350 TM4SF1P30408 202 aa9.85□□□□□ -0.83
USP3-AS1-206ENST00000560350 EIF4A1P60842 406 aaKnown RBP9.85□□□□□ -0.83
USP3-AS1-206ENST00000560350 DHX9Q08211 1270 aaKnown RBP9.85□□□□□ -0.83
USP3-AS1-206ENST00000560350 GPR162Q16538 588 aa9.85□□□□□ -0.83
USP3-AS1-206ENST00000560350 CLEC4GQ6UXB4 293 aa9.85□□□□□ -0.83
USP3-AS1-206ENST00000560350 GOPCQ9HD26 462 aa9.85□□□□□ -0.83
USP3-AS1-206ENST00000560350 TSPYL4Q9UJ04 414 aa9.85□□□□□ -0.83
USP3-AS1-206ENST00000560350 USP16Q9Y5T5 823 aa9.85□□□□□ -0.83
USP3-AS1-206ENST00000560350 TTLL8A6PVC2 850 aa9.84□□□□□ -0.83
USP3-AS1-206ENST00000560350 CHL1O00533 1208 aa9.84□□□□□ -0.83
USP3-AS1-206ENST00000560350 SPINT1O43278 529 aa9.84□□□□□ -0.83
USP3-AS1-206ENST00000560350 SMIM5Q71RC9 77 aa9.84□□□□□ -0.83
USP3-AS1-206ENST00000560350 NGEFQ8N5V2 710 aa9.84□□□□□ -0.83
USP3-AS1-206ENST00000560350 A1BGP04217 495 aa9.83□□□□□ -0.84
USP3-AS1-206ENST00000560350 NEUROD2Q15784 382 aa9.83□□□□□ -0.84
USP3-AS1-206ENST00000560350 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.83□□□□□ -0.84
USP3-AS1-206ENST00000560350 USPL1Q5W0Q7 1092 aa9.83□□□□□ -0.84
USP3-AS1-206ENST00000560350 CCDC146Q8IYE0 955 aa9.83□□□□□ -0.84
USP3-AS1-206ENST00000560350 MRS2Q9HD23 443 aa9.83□□□□□ -0.84
USP3-AS1-206ENST00000560350 MIS18AQ9NYP9 233 aa9.83□□□□□ -0.84
USP3-AS1-206ENST00000560350 ZNF652Q9Y2D9 606 aa9.83□□□□□ -0.84
USP3-AS1-206ENST00000560350 C4BP0C0L5 1744 aa9.82□□□□□ -0.84
USP3-AS1-206ENST00000560350 TOGARAM1Q9Y4F4 1720 aa9.82□□□□□ -0.84
USP3-AS1-206ENST00000560350 FAM181BA6NEQ2 426 aa9.82□□□□□ -0.84
USP3-AS1-206ENST00000560350 APAF1O14727 1248 aa9.82□□□□□ -0.84
USP3-AS1-206ENST00000560350 HOXB7P09629 217 aa9.82□□□□□ -0.84
USP3-AS1-206ENST00000560350 CCDC27Q2M243 656 aa9.82□□□□□ -0.84
USP3-AS1-206ENST00000560350 PNMA1Q8ND90 353 aa9.82□□□□□ -0.84
USP3-AS1-206ENST00000560350 SRP68Q9UHB9 627 aaKnown RBP9.82□□□□□ -0.84
USP3-AS1-206ENST00000560350 COL15A1P39059 1388 aa9.82□□□□□ -0.84
USP3-AS1-206ENST00000560350 CASZ1Q86V15 1759 aa9.82□□□□□ -0.84
USP3-AS1-206ENST00000560350 ZNF831Q5JPB2 1677 aa9.81□□□□□ -0.84
USP3-AS1-206ENST00000560350 ERVV-1B6SEH8 477 aa9.81□□□□□ -0.84
USP3-AS1-206ENST00000560350 GNAI1P63096 354 aa9.81□□□□□ -0.84
USP3-AS1-206ENST00000560350 NBPF20Q3BBV1 942 aa9.81□□□□□ -0.84
USP3-AS1-206ENST00000560350 DZIP3Q86Y13 1208 aaKnown RBP9.81□□□□□ -0.84
USP3-AS1-206ENST00000560350 SETDB2Q96T68 719 aa9.81□□□□□ -0.84
USP3-AS1-206ENST00000560350 THUMPD2Q9BTF0 503 aaKnown RBP9.81□□□□□ -0.84
USP3-AS1-206ENST00000560350 TRIM34Q9BYJ4 488 aa9.81□□□□□ -0.84
USP3-AS1-206ENST00000560350 RRP7AQ9Y3A4 280 aaKnown RBP9.81□□□□□ -0.84
USP3-AS1-206ENST00000560350 POLRMTO00411 1230 aaKnown RBP9.8□□□□□ -0.84
USP3-AS1-206ENST00000560350 SERPINB2P05120 415 aa9.8□□□□□ -0.84
USP3-AS1-206ENST00000560350 NFIXQ14938 502 aa9.8□□□□□ -0.84
USP3-AS1-206ENST00000560350 NLGN2Q8NFZ4 835 aa9.8□□□□□ -0.84
USP3-AS1-206ENST00000560350 AGBL1Q96MI9 1066 aa9.8□□□□□ -0.84
USP3-AS1-206ENST00000560350 IFT57Q9NWB7 429 aa9.8□□□□□ -0.84
USP3-AS1-206ENST00000560350 TBC1D2BQ9UPU7 963 aa9.8□□□□□ -0.84
USP3-AS1-206ENST00000560350 ZNF330Q9Y3S2 320 aaPredicted RBP9.8□□□□□ -0.84
USP3-AS1-206ENST00000560350 KCPQ6ZWJ8 1503 aa9.8□□□□□ -0.84
USP3-AS1-206ENST00000560350 C5P01031 1676 aa9.8□□□□□ -0.84
USP3-AS1-206ENST00000560350 ADAMTS7Q9UKP4 1686 aa9.8□□□□□ -0.84
USP3-AS1-206ENST00000560350 ITGB4P16144 1822 aa9.79□□□□□ -0.84
USP3-AS1-206ENST00000560350 CAMTA2O94983 1202 aa9.79□□□□□ -0.84
USP3-AS1-206ENST00000560350 PTSQ03393 145 aa9.79□□□□□ -0.84
USP3-AS1-206ENST00000560350 PCMTD1Q96MG8 357 aaPredicted RBP9.79□□□□□ -0.84
USP3-AS1-206ENST00000560350 PIM2Q9P1W9 311 aa9.79□□□□□ -0.84
USP3-AS1-206ENST00000560350 PRAMEF22A3QJZ6 481 aa9.78□□□□□ -0.84
USP3-AS1-206ENST00000560350 FIGNL2A6NMB9 653 aa9.78□□□□□ -0.84
USP3-AS1-206ENST00000560350 ESPNB1AK53 854 aa9.78□□□□□ -0.84
USP3-AS1-206ENST00000560350 ZNF853P0CG23 659 aa9.78□□□□□ -0.84
USP3-AS1-206ENST00000560350 YY1P25490 414 aa9.78□□□□□ -0.84
USP3-AS1-206ENST00000560350 DDR1Q08345 913 aa9.78□□□□□ -0.84
USP3-AS1-206ENST00000560350 NBPF10Q6P3W6 841 aaKnown RBP9.78□□□□□ -0.84
USP3-AS1-206ENST00000560350 TPTE2Q6XPS3 522 aa9.78□□□□□ -0.84
USP3-AS1-206ENST00000560350 NBPF15Q8N660 670 aa9.78□□□□□ -0.84
USP3-AS1-206ENST00000560350 BRIP1Q9BX63 1249 aa9.78□□□□□ -0.84
USP3-AS1-206ENST00000560350 TMPRSS4Q9NRS4 437 aa9.78□□□□□ -0.84
USP3-AS1-206ENST00000560350 LAS1LQ9Y4W2 734 aaKnown RBP9.78□□□□□ -0.84
USP3-AS1-206ENST00000560350 QSER1Q2KHR3 1735 aa9.78□□□□□ -0.84
USP3-AS1-206ENST00000560350 SCN11AQ9UI33 1791 aa9.78□□□□□ -0.84
USP3-AS1-206ENST00000560350 H0YIN7 160 aa9.77□□□□□ -0.85
USP3-AS1-206ENST00000560350 NPHP1O15259 732 aa9.77□□□□□ -0.85
USP3-AS1-206ENST00000560350 EIF2S2P20042 333 aaKnown RBP9.77□□□□□ -0.85
USP3-AS1-206ENST00000560350 PDE6BP35913 854 aa9.77□□□□□ -0.85
USP3-AS1-206ENST00000560350 CTSOP43234 321 aaPredicted RBP9.77□□□□□ -0.85
USP3-AS1-206ENST00000560350 TMEM259Q4ZIN3 620 aa9.77□□□□□ -0.85
USP3-AS1-206ENST00000560350 CCDC184Q52MB2 194 aa9.77□□□□□ -0.85
USP3-AS1-206ENST00000560350 TBC1D9BQ66K14 1250 aa9.77□□□□□ -0.85
USP3-AS1-206ENST00000560350 KIF6Q6ZMV9 814 aa9.77□□□□□ -0.85
USP3-AS1-206ENST00000560350 WDR63Q8IWG1 891 aa9.77□□□□□ -0.85
USP3-AS1-206ENST00000560350 ZNF784Q8NCA9 323 aaPredicted RBP9.77□□□□□ -0.85
USP3-AS1-206ENST00000560350 IL16Q14005 1332 aa9.77□□□□□ -0.85
USP3-AS1-206ENST00000560350 A0A0G2JLW4 131 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms