RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 USP17L8P0C7I0 530 aa10.58□□□□□ -0.72
USP3-217ENST00000560070 IRX6P78412 446 aaPredicted RBP10.58□□□□□ -0.72
USP3-217ENST00000560070 FSTL1Q12841 308 aa10.58□□□□□ -0.72
USP3-217ENST00000560070 DLK2Q6UY11 383 aa10.58□□□□□ -0.72
USP3-217ENST00000560070 LDHDQ86WU2 507 aa10.58□□□□□ -0.72
USP3-217ENST00000560070 SIRT2Q8IXJ6 389 aa10.58□□□□□ -0.72
USP3-217ENST00000560070 RPAP2Q8IXW5 612 aaPredicted RBP10.58□□□□□ -0.72
USP3-217ENST00000560070 CNTROBQ8N137 903 aa10.58□□□□□ -0.72
USP3-217ENST00000560070 AGBL3Q8NEM8 1001 aa10.58□□□□□ -0.72
USP3-217ENST00000560070 GMLQ99445 158 aa10.58□□□□□ -0.72
USP3-217ENST00000560070 CHMP4BQ9H444 224 aaKnown RBP10.58□□□□□ -0.72
USP3-217ENST00000560070 FBXO3Q9UK99 471 aa10.58□□□□□ -0.72
USP3-217ENST00000560070 SCAF8Q9UPN6 1271 aaKnown RBP10.58□□□□□ -0.72
USP3-217ENST00000560070 TAF1P21675 1872 aa10.57□□□□□ -0.72
USP3-217ENST00000560070 A0A1B0GUL7 405 aa10.57□□□□□ -0.72
USP3-217ENST00000560070 PHKA1P46020 1223 aa10.57□□□□□ -0.72
USP3-217ENST00000560070 RBM5P52756 815 aaKnown RBP eCLIP10.57□□□□□ -0.72
USP3-217ENST00000560070 SCARF1Q14162 830 aa10.57□□□□□ -0.72
USP3-217ENST00000560070 USP48Q86UV5 1035 aa10.57□□□□□ -0.72
USP3-217ENST00000560070 OGFOD1Q8N543 542 aa10.57□□□□□ -0.72
USP3-217ENST00000560070 CERS5Q8N5B7 392 aa10.57□□□□□ -0.72
USP3-217ENST00000560070 XAGE2Q96GT9 111 aa10.57□□□□□ -0.72
USP3-217ENST00000560070 CCDC8Q9H0W5 538 aaPredicted RBP10.57□□□□□ -0.72
USP3-217ENST00000560070 AKAP2Q9Y2D5 859 aa10.57□□□□□ -0.72
USP3-217ENST00000560070 ASTN2O75129 1339 aaPredicted RBP10.57□□□□□ -0.72
USP3-217ENST00000560070 TRAF5O00463 557 aa10.56□□□□□ -0.72
USP3-217ENST00000560070 GRIK5Q16478 980 aa10.56□□□□□ -0.72
USP3-217ENST00000560070 KIF4BQ2VIQ3 1234 aa10.56□□□□□ -0.72
USP3-217ENST00000560070 CCDC102BQ68D86 513 aa10.56□□□□□ -0.72
USP3-217ENST00000560070 GLIS2Q9BZE0 524 aaPredicted RBP10.56□□□□□ -0.72
USP3-217ENST00000560070 IL1RAPL2Q9NP60 686 aa10.56□□□□□ -0.72
USP3-217ENST00000560070 MYOZ2Q9NPC6 264 aa10.56□□□□□ -0.72
USP3-217ENST00000560070 GNL3LQ9NVN8 582 aaKnown RBP10.56□□□□□ -0.72
USP3-217ENST00000560070 NOP58Q9Y2X3 529 aaKnown RBP10.56□□□□□ -0.72
USP3-217ENST00000560070 PCDHAC2Q9Y5I4 1007 aa10.56□□□□□ -0.72
USP3-217ENST00000560070 LAMB2P55268 1798 aa10.56□□□□□ -0.72
USP3-217ENST00000560070 HMMRO75330 724 aa10.55□□□□□ -0.72
USP3-217ENST00000560070 HSPA6P17066 643 aa10.55□□□□□ -0.72
USP3-217ENST00000560070 NBPF9Q3BBW0 867 aa10.55□□□□□ -0.72
USP3-217ENST00000560070 MFSD14BQ5SR56 506 aa10.55□□□□□ -0.72
USP3-217ENST00000560070 ZNF408Q9H9D4 720 aa10.55□□□□□ -0.72
USP3-217ENST00000560070 HDAC9Q9UKV0 1011 aa10.55□□□□□ -0.72
USP3-217ENST00000560070 PCDHB15Q9Y5E8 787 aa10.55□□□□□ -0.72
USP3-217ENST00000560070 FER1L6Q2WGJ9 1857 aa10.55□□□□□ -0.72
USP3-217ENST00000560070 ITGBL1O95965 494 aaPredicted RBP10.54□□□□□ -0.72
USP3-217ENST00000560070 ZNF280AP59817 542 aaPredicted RBP10.54□□□□□ -0.72
USP3-217ENST00000560070 DLGAP5Q15398 846 aa10.54□□□□□ -0.72
USP3-217ENST00000560070 CFAP100Q494V2 611 aa10.54□□□□□ -0.72
USP3-217ENST00000560070 TNNI3KQ59H18 835 aa10.54□□□□□ -0.72
USP3-217ENST00000560070 ANGEL2Q5VTE6 544 aaKnown RBP10.54□□□□□ -0.72
USP3-217ENST00000560070 EXOC6Q8TAG9 804 aa10.54□□□□□ -0.72
USP3-217ENST00000560070 DCPSQ96C86 337 aaKnown RBP10.54□□□□□ -0.72
USP3-217ENST00000560070 DBNDD2Q9BQY9 259 aa10.54□□□□□ -0.72
USP3-217ENST00000560070 SNRKQ9NRH2 765 aa10.54□□□□□ -0.72
USP3-217ENST00000560070 TTF2Q9UNY4 1162 aaKnown RBP10.54□□□□□ -0.72
USP3-217ENST00000560070 FPGT-TNNI3KV9GXZ4 949 aa10.54□□□□□ -0.72
USP3-217ENST00000560070 FAM205AQ6ZU69 1335 aa10.54□□□□□ -0.72
USP3-217ENST00000560070 CACNA1SQ13698 1873 aa10.53□□□□□ -0.72
USP3-217ENST00000560070 ADM5C9JUS6 153 aa10.53□□□□□ -0.72
USP3-217ENST00000560070 SMARCA5O60264 1052 aaPredicted RBP10.53□□□□□ -0.72
USP3-217ENST00000560070 HSP90AB4PQ58FF6 505 aa10.53□□□□□ -0.72
USP3-217ENST00000560070 TTC39AQ5SRH9 613 aa10.53□□□□□ -0.72
USP3-217ENST00000560070 PRAMEF18Q5VWM3 479 aa10.53□□□□□ -0.72
USP3-217ENST00000560070 AACSQ86V21 672 aa10.53□□□□□ -0.72
USP3-217ENST00000560070 RHPN1Q8TCX5 695 aa10.53□□□□□ -0.72
USP3-217ENST00000560070 EAF2Q96CJ1 260 aaPredicted RBP10.53□□□□□ -0.72
USP3-217ENST00000560070 TLR7Q9NYK1 1049 aaKnown RBP10.53□□□□□ -0.72
USP3-217ENST00000560070 GGA3Q9NZ52 723 aa10.53□□□□□ -0.72
USP3-217ENST00000560070 ABCF2Q9UG63 623 aa10.53□□□□□ -0.72
USP3-217ENST00000560070 MYO3BQ8WXR4 1341 aa10.53□□□□□ -0.72
USP3-217ENST00000560070 CLRN2A0PK11 232 aa10.52□□□□□ -0.73
USP3-217ENST00000560070 WNT10BO00744 389 aa10.52□□□□□ -0.73
USP3-217ENST00000560070 APLP1P51693 650 aa10.52□□□□□ -0.73
USP3-217ENST00000560070 CCDC158Q5M9N0 1113 aa10.52□□□□□ -0.73
USP3-217ENST00000560070 PI16Q6UXB8 463 aa10.52□□□□□ -0.73
USP3-217ENST00000560070 TBC1D9Q6ZT07 1266 aa10.52□□□□□ -0.73
USP3-217ENST00000560070 CDC37L1Q7L3B6 337 aa10.52□□□□□ -0.73
USP3-217ENST00000560070 KRT26Q7Z3Y9 468 aa10.52□□□□□ -0.73
USP3-217ENST00000560070 ERC1Q8IUD2 1116 aa10.52□□□□□ -0.73
USP3-217ENST00000560070 WDR66Q8TBY9 1149 aa10.52□□□□□ -0.73
USP3-217ENST00000560070 ZC3H15Q8WU90 426 aaKnown RBP10.52□□□□□ -0.73
USP3-217ENST00000560070 PRMT6Q96LA8 375 aaPredicted RBP10.52□□□□□ -0.73
USP3-217ENST00000560070 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.52□□□□□ -0.73
USP3-217ENST00000560070 PGAP2Q9UHJ9 254 aa10.52□□□□□ -0.73
USP3-217ENST00000560070 DENND2AQ9ULE3 1009 aa10.52□□□□□ -0.73
USP3-217ENST00000560070 RAB11FIP3O75154 756 aa10.51□□□□□ -0.73
USP3-217ENST00000560070 FKBP1AP62942 108 aaKnown RBP10.51□□□□□ -0.73
USP3-217ENST00000560070 RASGRF1Q13972 1273 aa10.51□□□□□ -0.73
USP3-217ENST00000560070 SULF1Q8IWU6 871 aa10.51□□□□□ -0.73
USP3-217ENST00000560070 TBC1D22AQ8WUA7 517 aa10.51□□□□□ -0.73
USP3-217ENST00000560070 KIF1BPQ96EK5 621 aa10.51□□□□□ -0.73
USP3-217ENST00000560070 TDRD3Q9H7E2 651 aaKnown RBP10.51□□□□□ -0.73
USP3-217ENST00000560070 VEZTQ9HBM0 779 aa10.51□□□□□ -0.73
USP3-217ENST00000560070 GPR108Q9NPR9 543 aa10.51□□□□□ -0.73
USP3-217ENST00000560070 HMG20BQ9P0W2 317 aa10.51□□□□□ -0.73
USP3-217ENST00000560070 CELF2O95319 508 aaKnown RBP10.5□□□□□ -0.73
USP3-217ENST00000560070 LDHBP07195 334 aaKnown RBP10.5□□□□□ -0.73
USP3-217ENST00000560070 IFIT2P09913 472 aaKnown RBP10.5□□□□□ -0.73
USP3-217ENST00000560070 PRDX5P30044 214 aa10.5□□□□□ -0.73
USP3-217ENST00000560070 CRKP46108 304 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms