RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 BTG4Q9NY30 223 aa11.78□□□□□ -0.52
LRRC28-216ENST00000559819 NRBP1Q9UHY1 535 aa11.78□□□□□ -0.52
LRRC28-216ENST00000559819 RIPOR2Q9Y4F9 1068 aa11.78□□□□□ -0.52
LRRC28-216ENST00000559819 KLF18A0A0U1RQI7 1052 aa11.78□□□□□ -0.52
LRRC28-216ENST00000559819 ZNF165P49910 485 aa11.78□□□□□ -0.52
LRRC28-216ENST00000559819 MB21D2Q8IYB1 491 aaPredicted RBP11.78□□□□□ -0.52
LRRC28-216ENST00000559819 TAOK2Q9UL54 1235 aa11.78□□□□□ -0.52
LRRC28-216ENST00000559819 ZBTB1Q9Y2K1 713 aa11.78□□□□□ -0.52
LRRC28-216ENST00000559819 GOLGA8BA8MQT2 603 aa11.77□□□□□ -0.52
LRRC28-216ENST00000559819 STARD3NLO95772 234 aa11.77□□□□□ -0.52
LRRC28-216ENST00000559819 TDRD7Q8NHU6 1098 aaKnown RBP11.77□□□□□ -0.52
LRRC28-216ENST00000559819 TSC1Q92574 1164 aa11.77□□□□□ -0.52
LRRC28-216ENST00000559819 CNNM1Q9NRU3 951 aa11.77□□□□□ -0.52
LRRC28-216ENST00000559819 HPS5Q9UPZ3 1129 aa11.77□□□□□ -0.52
LRRC28-216ENST00000559819 SPEF2Q9C093 1822 aa11.77□□□□□ -0.53
LRRC28-216ENST00000559819 ZFYP08048 801 aaPredicted RBP11.77□□□□□ -0.53
LRRC28-216ENST00000559819 ZNF75DP51815 510 aa11.77□□□□□ -0.53
LRRC28-216ENST00000559819 SNW1Q13573 536 aaKnown RBP11.77□□□□□ -0.53
LRRC28-216ENST00000559819 DRC7Q8IY82 874 aa11.77□□□□□ -0.53
LRRC28-216ENST00000559819 KIAA1524Q8TCG1 905 aa11.77□□□□□ -0.53
LRRC28-216ENST00000559819 FBXW7Q969H0 707 aa11.77□□□□□ -0.53
LRRC28-216ENST00000559819 SYTL4Q96C24 671 aaPredicted RBP11.77□□□□□ -0.53
LRRC28-216ENST00000559819 ZNF396Q96N95 335 aaPredicted RBP11.77□□□□□ -0.53
LRRC28-216ENST00000559819 TRIM5Q9C035 493 aa11.77□□□□□ -0.53
LRRC28-216ENST00000559819 NBPF3Q9H094 633 aa11.77□□□□□ -0.53
LRRC28-216ENST00000559819 PIH1D3Q9NQM4 214 aaKnown RBP11.77□□□□□ -0.53
LRRC28-216ENST00000559819 SPTLC3Q9NUV7 552 aa11.77□□□□□ -0.53
LRRC28-216ENST00000559819 CTNNA3Q9UI47 895 aa11.77□□□□□ -0.53
LRRC28-216ENST00000559819 IRS4O14654 1257 aaPredicted RBP11.76□□□□□ -0.53
LRRC28-216ENST00000559819 ME1P48163 572 aa11.76□□□□□ -0.53
LRRC28-216ENST00000559819 CTSWP56202 376 aa11.76□□□□□ -0.53
LRRC28-216ENST00000559819 LRRFIP1Q32MZ4 808 aaKnown RBP11.76□□□□□ -0.53
LRRC28-216ENST00000559819 CCDC186Q7Z3E2 898 aa11.76□□□□□ -0.53
LRRC28-216ENST00000559819 TICAM2Q86XR7 235 aa11.76□□□□□ -0.53
LRRC28-216ENST00000559819 FSIP1Q8NA03 581 aa11.76□□□□□ -0.53
LRRC28-216ENST00000559819 HELBQ8NG08 1087 aaPredicted RBP11.76□□□□□ -0.53
LRRC28-216ENST00000559819 TEX13AQ9BXU3 409 aaPredicted RBP11.76□□□□□ -0.53
LRRC28-216ENST00000559819 FBXO3Q9UK99 471 aa11.76□□□□□ -0.53
LRRC28-216ENST00000559819 TBC1D2BQ9UPU7 963 aa11.76□□□□□ -0.53
LRRC28-216ENST00000559819 KIF3AQ9Y496 699 aa11.76□□□□□ -0.53
LRRC28-216ENST00000559819 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.76□□□□□ -0.53
LRRC28-216ENST00000559819 ANKRD18BA2A2Z9 1011 aa11.76□□□□□ -0.53
LRRC28-216ENST00000559819 ZNF213O14771 459 aa11.76□□□□□ -0.53
LRRC28-216ENST00000559819 POLR3DP05423 398 aaPredicted RBP11.76□□□□□ -0.53
LRRC28-216ENST00000559819 LRMPQ12912 555 aa11.76□□□□□ -0.53
LRRC28-216ENST00000559819 PLA2G4DQ86XP0 818 aa11.76□□□□□ -0.53
LRRC28-216ENST00000559819 VSIG10Q8N0Z9 540 aa11.76□□□□□ -0.53
LRRC28-216ENST00000559819 TRMT112Q9UI30 125 aaKnown RBP11.76□□□□□ -0.53
LRRC28-216ENST00000559819 CDHR2Q9BYE9 1310 aa11.76□□□□□ -0.53
LRRC28-216ENST00000559819 GOLGA6L6A8MZA4 724 aa11.75□□□□□ -0.53
LRRC28-216ENST00000559819 CYP19A1P11511 503 aaPredicted RBP11.75□□□□□ -0.53
LRRC28-216ENST00000559819 PHKA1P46020 1223 aa11.75□□□□□ -0.53
LRRC28-216ENST00000559819 CCDC73Q6ZRK6 1079 aa11.75□□□□□ -0.53
LRRC28-216ENST00000559819 RALYLQ86SE5 291 aaKnown RBP11.75□□□□□ -0.53
LRRC28-216ENST00000559819 TBC1D10CQ8IV04 446 aa11.75□□□□□ -0.53
LRRC28-216ENST00000559819 CLIC4Q9Y696 253 aa11.75□□□□□ -0.53
LRRC28-216ENST00000559819 FAM177BA6PVY3 158 aa11.75□□□□□ -0.53
LRRC28-216ENST00000559819 SNAP23O00161 211 aa11.75□□□□□ -0.53
LRRC28-216ENST00000559819 IDH1O75874 414 aaKnown RBP11.75□□□□□ -0.53
LRRC28-216ENST00000559819 RXRAP19793 462 aa11.75□□□□□ -0.53
LRRC28-216ENST00000559819 ADD2P35612 726 aa11.75□□□□□ -0.53
LRRC28-216ENST00000559819 EVCP57679 992 aa11.75□□□□□ -0.53
LRRC28-216ENST00000559819 SLC9C2Q5TAH2 1124 aa11.75□□□□□ -0.53
LRRC28-216ENST00000559819 VGLL2Q8N8G2 317 aa11.75□□□□□ -0.53
LRRC28-216ENST00000559819 ENGASEQ8NFI3 743 aa11.75□□□□□ -0.53
LRRC28-216ENST00000559819 NCOA7Q8NI08 942 aa11.75□□□□□ -0.53
LRRC28-216ENST00000559819 C8orf76Q96K31 380 aa11.75□□□□□ -0.53
LRRC28-216ENST00000559819 PCDHA7Q9UN72 937 aa11.75□□□□□ -0.53
LRRC28-216ENST00000559819 MYH15Q9Y2K3 1946 aa11.75□□□□□ -0.53
LRRC28-216ENST00000559819 KIF28PB7ZC32 967 aa11.74□□□□□ -0.53
LRRC28-216ENST00000559819 IQCB1Q15051 598 aa11.74□□□□□ -0.53
LRRC28-216ENST00000559819 ORC3Q9UBD5 711 aaPredicted RBP11.74□□□□□ -0.53
LRRC28-216ENST00000559819 WWC3Q9ULE0 1092 aa11.74□□□□□ -0.53
LRRC28-216ENST00000559819 A0A1B0GVL5 298 aa11.74□□□□□ -0.53
LRRC28-216ENST00000559819 KINO60870 393 aaKnown RBP11.74□□□□□ -0.53
LRRC28-216ENST00000559819 CYB5R4Q7L1T6 521 aa11.74□□□□□ -0.53
LRRC28-216ENST00000559819 FBXL16Q8N461 479 aa11.74□□□□□ -0.53
LRRC28-216ENST00000559819 MYRIPQ8NFW9 859 aa11.74□□□□□ -0.53
LRRC28-216ENST00000559819 AIFM3Q96NN9 605 aa11.74□□□□□ -0.53
LRRC28-216ENST00000559819 SENP2Q9HC62 589 aa11.74□□□□□ -0.53
LRRC28-216ENST00000559819 INCENPQ9NQS7 918 aa11.74□□□□□ -0.53
LRRC28-216ENST00000559819 UBN2Q6ZU65 1347 aa11.74□□□□□ -0.53
LRRC28-216ENST00000559819 DYNC1I1O14576 645 aa11.73□□□□□ -0.53
LRRC28-216ENST00000559819 APPP05067 770 aa11.73□□□□□ -0.53
LRRC28-216ENST00000559819 FAM160A1Q05DH4 1040 aa11.73□□□□□ -0.53
LRRC28-216ENST00000559819 CCDC144BQ3MJ40 725 aa11.73□□□□□ -0.53
LRRC28-216ENST00000559819 CCDC102BQ68D86 513 aa11.73□□□□□ -0.53
LRRC28-216ENST00000559819 CCDC144CPQ8IYA2 1237 aa11.73□□□□□ -0.53
LRRC28-216ENST00000559819 ARID3AQ99856 593 aa11.73□□□□□ -0.53
LRRC28-216ENST00000559819 ZNF532Q9HCE3 1301 aa11.73□□□□□ -0.53
LRRC28-216ENST00000559819 CPLX1O14810 134 aa11.73□□□□□ -0.53
LRRC28-216ENST00000559819 TPM3P06753 285 aa11.73□□□□□ -0.53
LRRC28-216ENST00000559819 STX1AQ16623 288 aa11.73□□□□□ -0.53
LRRC28-216ENST00000559819 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.73□□□□□ -0.53
LRRC28-216ENST00000559819 A0A0G2JS52 829 aa11.73□□□□□ -0.53
LRRC28-216ENST00000559819 PDE8BO95263 885 aa11.73□□□□□ -0.53
LRRC28-216ENST00000559819 STK38Q15208 465 aa11.73□□□□□ -0.53
LRRC28-216ENST00000559819 DZIP3Q86Y13 1208 aaKnown RBP11.73□□□□□ -0.53
LRRC28-216ENST00000559819 PDCL3Q9H2J4 239 aa11.73□□□□□ -0.53
LRRC28-216ENST00000559819 RTEL1Q9NZ71 1219 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms