RNA–Protein interactions for RNA: ENST00000559201.5

LRRC49-215, Transcript of leucine rich repeat containing 49, humanhuman

TSL 3

Gene LRRC49, Length 938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-215ENST00000559201 Q6ZUG5 572 aa12.69□□□□□ -0.38
LRRC49-215ENST00000559201 RGS22Q8NE09 1264 aa12.69□□□□□ -0.38
LRRC49-215ENST00000559201 SYAP1Q96A49 352 aaPredicted RBP12.69□□□□□ -0.38
LRRC49-215ENST00000559201 DENND2AQ9ULE3 1009 aa12.69□□□□□ -0.38
LRRC49-215ENST00000559201 PDS5AQ29RF7 1337 aaKnown RBP12.68□□□□□ -0.38
LRRC49-215ENST00000559201 NHSQ6T4R5 1651 aa12.68□□□□□ -0.38
LRRC49-215ENST00000559201 PATL2C9JE40 543 aaKnown RBP12.68□□□□□ -0.38
LRRC49-215ENST00000559201 DHX16O60231 1041 aaKnown RBP12.68□□□□□ -0.38
LRRC49-215ENST00000559201 PFKFB2O60825 505 aa12.68□□□□□ -0.38
LRRC49-215ENST00000559201 PRPF40AO75400 957 aaKnown RBP12.68□□□□□ -0.38
LRRC49-215ENST00000559201 IDH1O75874 414 aaKnown RBP12.68□□□□□ -0.38
LRRC49-215ENST00000559201 FGAP02671 866 aa12.68□□□□□ -0.38
LRRC49-215ENST00000559201 PDE6AP16499 860 aa12.68□□□□□ -0.38
LRRC49-215ENST00000559201 MCM5P33992 734 aa12.68□□□□□ -0.38
LRRC49-215ENST00000559201 MRE11P49959 708 aa12.68□□□□□ -0.38
LRRC49-215ENST00000559201 EVCP57679 992 aa12.68□□□□□ -0.38
LRRC49-215ENST00000559201 PKP1Q13835 747 aa12.68□□□□□ -0.38
LRRC49-215ENST00000559201 LARP1BQ659C4 914 aaKnown RBP12.68□□□□□ -0.38
LRRC49-215ENST00000559201 TMEM87AQ8NBN3 555 aa12.68□□□□□ -0.38
LRRC49-215ENST00000559201 HELBQ8NG08 1087 aaPredicted RBP12.68□□□□□ -0.38
LRRC49-215ENST00000559201 NCOA7Q8NI08 942 aa12.68□□□□□ -0.38
LRRC49-215ENST00000559201 GTF3C6Q969F1 213 aa12.68□□□□□ -0.38
LRRC49-215ENST00000559201 AIDAQ96BJ3 306 aa12.68□□□□□ -0.38
LRRC49-215ENST00000559201 NACAP1Q9BZK3 213 aa12.68□□□□□ -0.38
LRRC49-215ENST00000559201 PIH1D3Q9NQM4 214 aaKnown RBP12.68□□□□□ -0.38
LRRC49-215ENST00000559201 MINPP1Q9UNW1 487 aa12.68□□□□□ -0.38
LRRC49-215ENST00000559201 COL5A3P25940 1745 aaPredicted RBP12.68□□□□□ -0.38
LRRC49-215ENST00000559201 ZNF532Q9HCE3 1301 aa12.67□□□□□ -0.38
LRRC49-215ENST00000559201 KAT6BQ8WYB5 2073 aa12.67□□□□□ -0.38
LRRC49-215ENST00000559201 FSD2A1L4K1 749 aa12.67□□□□□ -0.38
LRRC49-215ENST00000559201 F13A1P00488 732 aa12.67□□□□□ -0.38
LRRC49-215ENST00000559201 KRT27Q7Z3Y8 459 aa12.67□□□□□ -0.38
LRRC49-215ENST00000559201 RALYLQ86SE5 291 aaKnown RBP12.67□□□□□ -0.38
LRRC49-215ENST00000559201 PUS7LQ9H0K6 701 aaKnown RBP12.67□□□□□ -0.38
LRRC49-215ENST00000559201 CARMIL3Q8ND23 1372 aa12.67□□□□□ -0.38
LRRC49-215ENST00000559201 ZNF804BA4D1E1 1349 aa12.66□□□□□ -0.38
LRRC49-215ENST00000559201 PNPLA7Q6ZV29 1317 aa12.66□□□□□ -0.38
LRRC49-215ENST00000559201 TCRBV5S4A2TA0A5A2 114 aa12.66□□□□□ -0.38
LRRC49-215ENST00000559201 RASGRF1Q13972 1273 aa12.66□□□□□ -0.38
LRRC49-215ENST00000559201 ZNF772Q68DY9 489 aaPredicted RBP12.66□□□□□ -0.38
LRRC49-215ENST00000559201 BICDL1Q6ZP65 573 aa12.66□□□□□ -0.38
LRRC49-215ENST00000559201 VPS37DQ86XT2 251 aa12.66□□□□□ -0.38
LRRC49-215ENST00000559201 STRBPQ96SI9 672 aaKnown RBP12.66□□□□□ -0.38
LRRC49-215ENST00000559201 MTA3Q9BTC8 594 aa12.66□□□□□ -0.38
LRRC49-215ENST00000559201 NPHP1O15259 732 aa12.65□□□□□ -0.38
LRRC49-215ENST00000559201 LARGE1O95461 756 aa12.65□□□□□ -0.38
LRRC49-215ENST00000559201 NT5C2P49902 561 aa12.65□□□□□ -0.38
LRRC49-215ENST00000559201 BCAMP50895 628 aa12.65□□□□□ -0.38
LRRC49-215ENST00000559201 ZNF445P59923 1031 aa12.65□□□□□ -0.38
LRRC49-215ENST00000559201 STOX1Q6ZVD7 989 aa12.65□□□□□ -0.38
LRRC49-215ENST00000559201 PTF1AQ7RTS3 328 aa12.65□□□□□ -0.38
LRRC49-215ENST00000559201 FBXO33Q7Z6M2 555 aa12.65□□□□□ -0.38
LRRC49-215ENST00000559201 BRF1Q92994 677 aa12.65□□□□□ -0.38
LRRC49-215ENST00000559201 ZSCAN16Q9H4T2 348 aaPredicted RBP12.65□□□□□ -0.38
LRRC49-215ENST00000559201 CNNM2Q9H8M5 875 aa12.65□□□□□ -0.38
LRRC49-215ENST00000559201 LRP2BPQ9P2M1 347 aa12.65□□□□□ -0.38
LRRC49-215ENST00000559201 SRP68Q9UHB9 627 aaKnown RBP12.65□□□□□ -0.38
LRRC49-215ENST00000559201 MTMR6Q9Y217 621 aa12.65□□□□□ -0.38
LRRC49-215ENST00000559201 LEMD3Q9Y2U8 911 aa12.65□□□□□ -0.38
LRRC49-215ENST00000559201 PHF14O94880 888 aa12.64□□□□□ -0.39
LRRC49-215ENST00000559201 LETM1O95202 739 aaPredicted RBP12.64□□□□□ -0.39
LRRC49-215ENST00000559201 CHGBP05060 677 aa12.64□□□□□ -0.39
LRRC49-215ENST00000559201 APPP05067 770 aa12.64□□□□□ -0.39
LRRC49-215ENST00000559201 RBM6P78332 1123 aaKnown RBP12.64□□□□□ -0.39
LRRC49-215ENST00000559201 MAGEB6Q8N7X4 407 aa12.64□□□□□ -0.39
LRRC49-215ENST00000559201 NECAB1Q8N987 351 aa12.64□□□□□ -0.39
LRRC49-215ENST00000559201 FAM184AQ8NB25 1140 aa12.64□□□□□ -0.39
LRRC49-215ENST00000559201 FLAD1Q8NFF5 587 aa12.64□□□□□ -0.39
LRRC49-215ENST00000559201 SMARCC2Q8TAQ2 1214 aa12.64□□□□□ -0.39
LRRC49-215ENST00000559201 TMEM87BQ96K49 555 aa12.64□□□□□ -0.39
LRRC49-215ENST00000559201 KRT23Q9C075 422 aa12.64□□□□□ -0.39
LRRC49-215ENST00000559201 GZF1Q9H116 711 aaPredicted RBP12.64□□□□□ -0.39
LRRC49-215ENST00000559201 TAF6LQ9Y6J9 622 aa12.64□□□□□ -0.39
LRRC49-215ENST00000559201 MYH3P11055 1940 aa12.64□□□□□ -0.39
LRRC49-215ENST00000559201 BCORQ6W2J9 1755 aa12.64□□□□□ -0.39
LRRC49-215ENST00000559201 MYH14Q7Z406 1995 aaKnown RBP12.63□□□□□ -0.39
LRRC49-215ENST00000559201 HIBADHP31937 336 aaKnown RBP12.63□□□□□ -0.39
LRRC49-215ENST00000559201 KCNQ4P56696 695 aa12.63□□□□□ -0.39
LRRC49-215ENST00000559201 ST5P78524 1137 aa12.63□□□□□ -0.39
LRRC49-215ENST00000559201 GRAPQ13588 217 aa12.63□□□□□ -0.39
LRRC49-215ENST00000559201 SPTY2D1Q68D10 685 aaPredicted RBP12.63□□□□□ -0.39
LRRC49-215ENST00000559201 ATL3Q6DD88 541 aa12.63□□□□□ -0.39
LRRC49-215ENST00000559201 NAA16Q6N069 864 aaPredicted RBP12.63□□□□□ -0.39
LRRC49-215ENST00000559201 GIMAP6Q6P9H5 292 aa12.63□□□□□ -0.39
LRRC49-215ENST00000559201 PI16Q6UXB8 463 aa12.63□□□□□ -0.39
LRRC49-215ENST00000559201 TMC4Q7Z404 712 aa12.63□□□□□ -0.39
LRRC49-215ENST00000559201 MB21D2Q8IYB1 491 aaPredicted RBP12.63□□□□□ -0.39
LRRC49-215ENST00000559201 CNBD1Q8NA66 436 aa12.63□□□□□ -0.39
LRRC49-215ENST00000559201 GRAPLQ8TC17 118 aaPredicted RBP12.63□□□□□ -0.39
LRRC49-215ENST00000559201 LARP6Q9BRS8 491 aaKnown RBP12.63□□□□□ -0.39
LRRC49-215ENST00000559201 NAPBQ9H115 298 aa12.63□□□□□ -0.39
LRRC49-215ENST00000559201 RNF41Q9H4P4 317 aaPredicted RBP12.63□□□□□ -0.39
LRRC49-215ENST00000559201 WWC3Q9ULE0 1092 aa12.63□□□□□ -0.39
LRRC49-215ENST00000559201 LAMB2P55268 1798 aa12.62□□□□□ -0.39
LRRC49-215ENST00000559201 FOXP2O15409 715 aa12.62□□□□□ -0.39
LRRC49-215ENST00000559201 PRC1O43663 620 aa12.62□□□□□ -0.39
LRRC49-215ENST00000559201 BBOX1O75936 387 aa12.62□□□□□ -0.39
LRRC49-215ENST00000559201 PCP11498 1178 aaKnown RBP12.62□□□□□ -0.39
LRRC49-215ENST00000559201 TM4SF1P30408 202 aa12.62□□□□□ -0.39
LRRC49-215ENST00000559201 UBE2HP62256 183 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms