RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 GOLGA6L3A6NEY3 463 aa12.8□□□□□ -0.36
CSPG4P5-201ENST00000558731 PDE6AP16499 860 aa12.8□□□□□ -0.36
CSPG4P5-201ENST00000558731 NFIXQ14938 502 aa12.8□□□□□ -0.36
CSPG4P5-201ENST00000558731 TTF1Q15361 905 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P5-201ENST00000558731 FAM173BQ6P4H8 233 aa12.8□□□□□ -0.36
CSPG4P5-201ENST00000558731 NCOA5Q9HCD5 579 aaKnown RBP12.8□□□□□ -0.36
CSPG4P5-201ENST00000558731 FGAP02671 866 aa12.8□□□□□ -0.36
CSPG4P5-201ENST00000558731 RXRAP19793 462 aa12.8□□□□□ -0.36
CSPG4P5-201ENST00000558731 CYP7A1P22680 504 aa12.8□□□□□ -0.36
CSPG4P5-201ENST00000558731 CEBPZQ03701 1054 aaKnown RBP12.8□□□□□ -0.36
CSPG4P5-201ENST00000558731 NAPBQ9H115 298 aa12.8□□□□□ -0.36
CSPG4P5-201ENST00000558731 ABCC12Q96J65 1359 aa12.8□□□□□ -0.36
CSPG4P5-201ENST00000558731 MED23Q9ULK4 1368 aa12.8□□□□□ -0.36
CSPG4P5-201ENST00000558731 ZFYP08048 801 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P5-201ENST00000558731 KLRK1P26718 216 aa12.8□□□□□ -0.36
CSPG4P5-201ENST00000558731 NFXL1Q6ZNB6 911 aa12.8□□□□□ -0.36
CSPG4P5-201ENST00000558731 TTC14Q96N46 770 aa12.8□□□□□ -0.36
CSPG4P5-201ENST00000558731 RRAGDQ9NQL2 400 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P5-201ENST00000558731 RBM27Q9P2N5 1060 aaKnown RBP12.8□□□□□ -0.36
CSPG4P5-201ENST00000558731 JAK2O60674 1132 aa12.79□□□□□ -0.36
CSPG4P5-201ENST00000558731 SYT1P21579 422 aa12.79□□□□□ -0.36
CSPG4P5-201ENST00000558731 STOX1Q6ZVD7 989 aa12.79□□□□□ -0.36
CSPG4P5-201ENST00000558731 INCENPQ9NQS7 918 aa12.79□□□□□ -0.36
CSPG4P5-201ENST00000558731 COL22A1Q8NFW1 1626 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P5-201ENST00000558731 UBR2Q8IWV8 1755 aa12.79□□□□□ -0.36
CSPG4P5-201ENST00000558731 E7EWF7 191 aa12.79□□□□□ -0.36
CSPG4P5-201ENST00000558731 STX6O43752 255 aa12.79□□□□□ -0.36
CSPG4P5-201ENST00000558731 ANKRD1Q15327 319 aa12.79□□□□□ -0.36
CSPG4P5-201ENST00000558731 CTNNA3Q9UI47 895 aa12.79□□□□□ -0.36
CSPG4P5-201ENST00000558731 WDR33Q9C0J8 1336 aaKnown RBP12.79□□□□□ -0.36
CSPG4P5-201ENST00000558731 RIC1Q4ADV7 1423 aa12.79□□□□□ -0.36
CSPG4P5-201ENST00000558731 PRKAB2O43741 272 aa12.79□□□□□ -0.36
CSPG4P5-201ENST00000558731 ZSCAN31Q96LW9 406 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P5-201ENST00000558731 ZDHHC9Q9Y397 364 aa12.79□□□□□ -0.36
CSPG4P5-201ENST00000558731 CNTNAP4Q9C0A0 1308 aa12.79□□□□□ -0.36
CSPG4P5-201ENST00000558731 MINPP1Q9UNW1 487 aa12.78□□□□□ -0.36
CSPG4P5-201ENST00000558731 SLC4A4Q9Y6R1 1079 aa12.78□□□□□ -0.36
CSPG4P5-201ENST00000558731 CPLX1O14810 134 aa12.78□□□□□ -0.36
CSPG4P5-201ENST00000558731 TRIM44Q96DX7 344 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P5-201ENST00000558731 N4BP2Q86UW6 1770 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P5-201ENST00000558731 DDIT3P35638 169 aa12.78□□□□□ -0.36
CSPG4P5-201ENST00000558731 TXNRD1Q16881 649 aa12.78□□□□□ -0.36
CSPG4P5-201ENST00000558731 CCDC82Q8N4S0 544 aa12.78□□□□□ -0.36
CSPG4P5-201ENST00000558731 VGLL2Q8N8G2 317 aa12.78□□□□□ -0.36
CSPG4P5-201ENST00000558731 SH2B1Q9NRF2 756 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P5-201ENST00000558731 MTMR7Q9Y216 660 aa12.78□□□□□ -0.36
CSPG4P5-201ENST00000558731 MYH14Q7Z406 1995 aaKnown RBP12.78□□□□□ -0.36
CSPG4P5-201ENST00000558731 C6orf229H3BNL8 230 aa12.77□□□□□ -0.36
CSPG4P5-201ENST00000558731 CTDSPL2Q05D32 466 aa12.77□□□□□ -0.36
CSPG4P5-201ENST00000558731 SDR42E1Q8WUS8 393 aa12.77□□□□□ -0.36
CSPG4P5-201ENST00000558731 ZKSCAN3Q9BRR0 538 aa12.77□□□□□ -0.36
CSPG4P5-201ENST00000558731 ZMYND15Q9H091 742 aa12.77□□□□□ -0.36
CSPG4P5-201ENST00000558731 DENND2AQ9ULE3 1009 aa12.77□□□□□ -0.36
CSPG4P5-201ENST00000558731 ADD2P35612 726 aa12.77□□□□□ -0.37
CSPG4P5-201ENST00000558731 CUL4AQ13619 759 aa12.77□□□□□ -0.37
CSPG4P5-201ENST00000558731 TM6SF1Q9BZW5 370 aa12.77□□□□□ -0.37
CSPG4P5-201ENST00000558731 CNPY2Q9Y2B0 182 aa12.77□□□□□ -0.37
CSPG4P5-201ENST00000558731 B4E1Z4 1266 aa12.77□□□□□ -0.37
CSPG4P5-201ENST00000558731 DHX32Q7L7V1 743 aaKnown RBP12.77□□□□□ -0.37
CSPG4P5-201ENST00000558731 INTS4Q96HW7 963 aaKnown RBP12.77□□□□□ -0.37
CSPG4P5-201ENST00000558731 G3V3G9 751 aa12.76□□□□□ -0.37
CSPG4P5-201ENST00000558731 SERPINB2P05120 415 aa12.76□□□□□ -0.37
CSPG4P5-201ENST00000558731 ST5P78524 1137 aa12.76□□□□□ -0.37
CSPG4P5-201ENST00000558731 DCAF8Q5TAQ9 597 aa12.76□□□□□ -0.37
CSPG4P5-201ENST00000558731 DSCC1Q9BVC3 393 aa12.76□□□□□ -0.37
CSPG4P5-201ENST00000558731 TFIP11Q9UBB9 837 aaKnown RBP12.76□□□□□ -0.37
CSPG4P5-201ENST00000558731 GOLGA6L4A6NEF3 574 aa12.76□□□□□ -0.37
CSPG4P5-201ENST00000558731 EPB41L2O43491 1005 aaKnown RBP12.76□□□□□ -0.37
CSPG4P5-201ENST00000558731 PRC1O43663 620 aa12.76□□□□□ -0.37
CSPG4P5-201ENST00000558731 TOB2Q14106 344 aaPredicted RBP12.76□□□□□ -0.37
CSPG4P5-201ENST00000558731 GOLGA8BA8MQT2 603 aa12.76□□□□□ -0.37
CSPG4P5-201ENST00000558731 RIMBP2O15034 1052 aa12.76□□□□□ -0.37
CSPG4P5-201ENST00000558731 KLF18A0A0U1RQI7 1052 aa12.75□□□□□ -0.37
CSPG4P5-201ENST00000558731 RC3H1Q5TC82 1133 aaKnown RBP12.75□□□□□ -0.37
CSPG4P5-201ENST00000558731 MICU3Q86XE3 530 aa12.75□□□□□ -0.37
CSPG4P5-201ENST00000558731 HIBADHP31937 336 aaKnown RBP12.75□□□□□ -0.37
CSPG4P5-201ENST00000558731 LCORLQ8N3X6 602 aa12.75□□□□□ -0.37
CSPG4P5-201ENST00000558731 BSDC1Q9NW68 430 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P5-201ENST00000558731 PRDM1O75626 825 aa12.75□□□□□ -0.37
CSPG4P5-201ENST00000558731 ZSCAN22P10073 491 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P5-201ENST00000558731 DNM1Q05193 864 aaKnown RBP12.75□□□□□ -0.37
CSPG4P5-201ENST00000558731 NAA16Q6N069 864 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P5-201ENST00000558731 NCOA7Q8NI08 942 aa12.75□□□□□ -0.37
CSPG4P5-201ENST00000558731 MYL10Q9BUA6 226 aa12.75□□□□□ -0.37
CSPG4P5-201ENST00000558731 NACAP1Q9BZK3 213 aa12.75□□□□□ -0.37
CSPG4P5-201ENST00000558731 BRD1O95696 1058 aa12.74□□□□□ -0.37
CSPG4P5-201ENST00000558731 SKOR2Q2VWA4 1001 aaPredicted RBP12.74□□□□□ -0.37
CSPG4P5-201ENST00000558731 DZIP1Q86YF9 867 aaKnown RBP12.74□□□□□ -0.37
CSPG4P5-201ENST00000558731 PAPPAQ13219 1627 aa12.74□□□□□ -0.37
CSPG4P5-201ENST00000558731 DYNLL1P63167 89 aaKnown RBP12.74□□□□□ -0.37
CSPG4P5-201ENST00000558731 TXNRD3Q86VQ6 643 aa12.74□□□□□ -0.37
CSPG4P5-201ENST00000558731 ZNF622Q969S3 477 aaKnown RBP eCLIP12.74□□□□□ -0.37
CSPG4P5-201ENST00000558731 NUP98P52948 1817 aa12.74□□□□□ -0.37
CSPG4P5-201ENST00000558731 F8W031 263 aaPredicted RBP12.74□□□□□ -0.37
CSPG4P5-201ENST00000558731 UFL1O94874 794 aa12.74□□□□□ -0.37
CSPG4P5-201ENST00000558731 FGFR2P21802 821 aa12.74□□□□□ -0.37
CSPG4P5-201ENST00000558731 CDC37L1Q7L3B6 337 aa12.74□□□□□ -0.37
CSPG4P5-201ENST00000558731 NUP133Q8WUM0 1156 aa12.74□□□□□ -0.37
CSPG4P5-201ENST00000558731 AATFQ9NY61 560 aaKnown RBP eCLIP12.74□□□□□ -0.37
CSPG4P5-201ENST00000558731 NRAPQ86VF7 1730 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms