RNA–Protein interactions for RNA: ENST00000557493.1

TGFB3-207, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-207ENST00000557493 DGKZQ13574 1117 aa12.9□□□□□ -0.34
TGFB3-207ENST00000557493 GRAPQ13588 217 aa12.9□□□□□ -0.34
TGFB3-207ENST00000557493 CRY2Q49AN0 593 aa12.9□□□□□ -0.34
TGFB3-207ENST00000557493 CCDC158Q5M9N0 1113 aa12.9□□□□□ -0.34
TGFB3-207ENST00000557493 GORABQ5T7V8 394 aa12.9□□□□□ -0.34
TGFB3-207ENST00000557493 RTKN2Q8IZC4 609 aa12.9□□□□□ -0.34
TGFB3-207ENST00000557493 GRAPLQ8TC17 118 aaPredicted RBP12.9□□□□□ -0.34
TGFB3-207ENST00000557493 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.9□□□□□ -0.34
TGFB3-207ENST00000557493 LPIN2Q92539 896 aa12.9□□□□□ -0.34
TGFB3-207ENST00000557493 RILPL2Q969X0 211 aa12.9□□□□□ -0.34
TGFB3-207ENST00000557493 RBM19Q9Y4C8 960 aaKnown RBP12.9□□□□□ -0.34
TGFB3-207ENST00000557493 RFX7Q2KHR2 1363 aa12.9□□□□□ -0.34
TGFB3-207ENST00000557493 TNRC18O15417 2968 aaPredicted RBP12.9□□□□□ -0.35
TGFB3-207ENST00000557493 AOC2O75106 756 aa12.89□□□□□ -0.35
TGFB3-207ENST00000557493 NPR1P16066 1061 aa12.89□□□□□ -0.35
TGFB3-207ENST00000557493 IARSP41252 1262 aaKnown RBP12.89□□□□□ -0.35
TGFB3-207ENST00000557493 RPS8P62241 208 aaKnown RBP12.89□□□□□ -0.35
TGFB3-207ENST00000557493 CELF1Q92879 486 aaKnown RBP12.89□□□□□ -0.35
TGFB3-207ENST00000557493 EVI5LQ96CN4 794 aa12.89□□□□□ -0.35
TGFB3-207ENST00000557493 RBM17Q96I25 401 aaKnown RBP12.89□□□□□ -0.35
TGFB3-207ENST00000557493 TLL2Q9Y6L7 1015 aa12.89□□□□□ -0.35
TGFB3-207ENST00000557493 SLX4Q8IY92 1834 aa12.89□□□□□ -0.35
TGFB3-207ENST00000557493 TAF1P21675 1872 aa12.89□□□□□ -0.35
TGFB3-207ENST00000557493 LRRC37AA6NMS7 1700 aa12.88□□□□□ -0.35
TGFB3-207ENST00000557493 KLRG2A4D1S0 409 aaPredicted RBP12.88□□□□□ -0.35
TGFB3-207ENST00000557493 HIP1O00291 1037 aa12.88□□□□□ -0.35
TGFB3-207ENST00000557493 IFIT1P09914 478 aaKnown RBP12.88□□□□□ -0.35
TGFB3-207ENST00000557493 FGFR2P21802 821 aa12.88□□□□□ -0.35
TGFB3-207ENST00000557493 TIMM10P62072 90 aa12.88□□□□□ -0.35
TGFB3-207ENST00000557493 CHRNDQ07001 517 aa12.88□□□□□ -0.35
TGFB3-207ENST00000557493 TTC39AQ5SRH9 613 aa12.88□□□□□ -0.35
TGFB3-207ENST00000557493 PRPF38BQ5VTL8 546 aaKnown RBP12.88□□□□□ -0.35
TGFB3-207ENST00000557493 JDP2Q8WYK2 163 aa12.88□□□□□ -0.35
TGFB3-207ENST00000557493 XAGE2Q96GT9 111 aa12.88□□□□□ -0.35
TGFB3-207ENST00000557493 ANKRD2Q9GZV1 360 aa12.88□□□□□ -0.35
TGFB3-207ENST00000557493 HOXD11P31277 338 aaPredicted RBP12.87□□□□□ -0.35
TGFB3-207ENST00000557493 MFAP1P55081 439 aaKnown RBP12.87□□□□□ -0.35
TGFB3-207ENST00000557493 FMR1Q06787 632 aaKnown RBP eCLIP12.87□□□□□ -0.35
TGFB3-207ENST00000557493 TMC4Q7Z404 712 aa12.87□□□□□ -0.35
TGFB3-207ENST00000557493 TICAM2Q86XR7 235 aa12.87□□□□□ -0.35
TGFB3-207ENST00000557493 ZNF512BQ96KM6 892 aaPredicted RBP12.87□□□□□ -0.35
TGFB3-207ENST00000557493 HAUS7Q99871 368 aa12.87□□□□□ -0.35
TGFB3-207ENST00000557493 BOLA2Q9H3K6 86 aa12.87□□□□□ -0.35
TGFB3-207ENST00000557493 GJA3Q9Y6H8 435 aa12.87□□□□□ -0.35
TGFB3-207ENST00000557493 LTBP1Q14766 1721 aa12.87□□□□□ -0.35
TGFB3-207ENST00000557493 TRAF5O00463 557 aa12.86□□□□□ -0.35
TGFB3-207ENST00000557493 MAP4K4O95819 1239 aaPredicted RBP12.86□□□□□ -0.35
TGFB3-207ENST00000557493 UQCRFS1P1P0C7P4 283 aa12.86□□□□□ -0.35
TGFB3-207ENST00000557493 ADORA1P30542 326 aa12.86□□□□□ -0.35
TGFB3-207ENST00000557493 HOXA10P31260 410 aaPredicted RBP12.86□□□□□ -0.35
TGFB3-207ENST00000557493 EIF6P56537 245 aaKnown RBP12.86□□□□□ -0.35
TGFB3-207ENST00000557493 UBE4AQ14139 1066 aa12.86□□□□□ -0.35
TGFB3-207ENST00000557493 CST9Q5W186 159 aa12.86□□□□□ -0.35
TGFB3-207ENST00000557493 CRAMP1Q96RY5 1269 aa12.86□□□□□ -0.35
TGFB3-207ENST00000557493 MINPP1Q9UNW1 487 aa12.86□□□□□ -0.35
TGFB3-207ENST00000557493 REC8O95072 547 aa12.85□□□□□ -0.35
TGFB3-207ENST00000557493 CHMLP26374 656 aa12.85□□□□□ -0.35
TGFB3-207ENST00000557493 ANP32AP39687 249 aaKnown RBP12.85□□□□□ -0.35
TGFB3-207ENST00000557493 KCNJ4P48050 445 aa12.85□□□□□ -0.35
TGFB3-207ENST00000557493 OLFM4Q6UX06 510 aa12.85□□□□□ -0.35
TGFB3-207ENST00000557493 USP50Q70EL3 339 aaPredicted RBP12.85□□□□□ -0.35
TGFB3-207ENST00000557493 HELBQ8NG08 1087 aaPredicted RBP12.85□□□□□ -0.35
TGFB3-207ENST00000557493 RUFY2Q8WXA3 655 aa12.85□□□□□ -0.35
TGFB3-207ENST00000557493 DNAJC2Q99543 621 aaKnown RBP12.85□□□□□ -0.35
TGFB3-207ENST00000557493 FSD1Q9BTV5 496 aa12.85□□□□□ -0.35
TGFB3-207ENST00000557493 DIAPH3Q9NSV4 1193 aa12.85□□□□□ -0.35
TGFB3-207ENST00000557493 RAD50Q92878 1312 aa12.85□□□□□ -0.35
TGFB3-207ENST00000557493 TAF5LO75529 589 aa12.84□□□□□ -0.35
TGFB3-207ENST00000557493 BBOX1O75936 387 aa12.84□□□□□ -0.35
TGFB3-207ENST00000557493 SEC24BO95487 1268 aa12.84□□□□□ -0.35
TGFB3-207ENST00000557493 ARID4AP29374 1257 aaPredicted RBP12.84□□□□□ -0.35
TGFB3-207ENST00000557493 SCNN1DP51172 638 aa12.84□□□□□ -0.35
TGFB3-207ENST00000557493 SOX10P56693 466 aa12.84□□□□□ -0.35
TGFB3-207ENST00000557493 LRRFIP1Q32MZ4 808 aaKnown RBP12.84□□□□□ -0.35
TGFB3-207ENST00000557493 SAPCD2Q86UD0 394 aa12.84□□□□□ -0.35
TGFB3-207ENST00000557493 HHIPL1Q96JK4 782 aa12.84□□□□□ -0.35
TGFB3-207ENST00000557493 ESYT1Q9BSJ8 1104 aa12.84□□□□□ -0.35
TGFB3-207ENST00000557493 PAG1Q9NWQ8 432 aa12.84□□□□□ -0.35
TGFB3-207ENST00000557493 CELF2O95319 508 aaKnown RBP12.83□□□□□ -0.36
TGFB3-207ENST00000557493 ALDH1B1P30837 517 aa12.83□□□□□ -0.36
TGFB3-207ENST00000557493 EPS15P42566 896 aa12.83□□□□□ -0.36
TGFB3-207ENST00000557493 CCDC102BQ68D86 513 aa12.83□□□□□ -0.36
TGFB3-207ENST00000557493 TBC1D32Q96NH3 1257 aa12.83□□□□□ -0.36
TGFB3-207ENST00000557493 PSMD1Q99460 953 aa12.83□□□□□ -0.36
TGFB3-207ENST00000557493 XDHP47989 1333 aa12.83□□□□□ -0.36
TGFB3-207ENST00000557493 AKAP11Q9UKA4 1901 aa12.82□□□□□ -0.36
TGFB3-207ENST00000557493 PPEF1O14829 653 aaPredicted RBP12.82□□□□□ -0.36
TGFB3-207ENST00000557493 EPB41L2O43491 1005 aaKnown RBP12.82□□□□□ -0.36
TGFB3-207ENST00000557493 CAVIN4Q5BKX8 364 aa12.82□□□□□ -0.36
TGFB3-207ENST00000557493 CIAPIN1Q6FI81 312 aa12.82□□□□□ -0.36
TGFB3-207ENST00000557493 KBTBD3Q8NAB2 608 aa12.82□□□□□ -0.36
TGFB3-207ENST00000557493 C22orf23Q9BZE7 217 aa12.82□□□□□ -0.36
TGFB3-207ENST00000557493 GNL3LQ9NVN8 582 aaKnown RBP12.82□□□□□ -0.36
TGFB3-207ENST00000557493 LEMD3Q9Y2U8 911 aa12.82□□□□□ -0.36
TGFB3-207ENST00000557493 MYH7P12883 1935 aa12.82□□□□□ -0.36
TGFB3-207ENST00000557493 DUOX1Q9NRD9 1551 aa12.81□□□□□ -0.36
TGFB3-207ENST00000557493 GOLIM4O00461 696 aa12.81□□□□□ -0.36
TGFB3-207ENST00000557493 PHKA1P46020 1223 aa12.81□□□□□ -0.36
TGFB3-207ENST00000557493 TTF1Q15361 905 aaPredicted RBP12.81□□□□□ -0.36
TGFB3-207ENST00000557493 CC2D2BQ6DHV5 1058 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms