RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 KSR2Q6VAB6 950 aa14.61□□□□□ -0.07
APEX1-216ENST00000557159 FCHSD1Q86WN1 690 aa14.61□□□□□ -0.07
APEX1-216ENST00000557159 TICAM2Q86XR7 235 aa14.61□□□□□ -0.07
APEX1-216ENST00000557159 CCAR1Q8IX12 1150 aaKnown RBP14.61□□□□□ -0.07
APEX1-216ENST00000557159 ZNF396Q96N95 335 aaPredicted RBP14.61□□□□□ -0.07
APEX1-216ENST00000557159 SCN11AQ9UI33 1791 aa14.61□□□□□ -0.07
APEX1-216ENST00000557159 NAP1L2Q9ULW6 460 aaPredicted RBP14.61□□□□□ -0.07
APEX1-216ENST00000557159 A0A1W2PQ27 194 aa14.6□□□□□ -0.07
APEX1-216ENST00000557159 A0A1W2PQ64 194 aa14.6□□□□□ -0.07
APEX1-216ENST00000557159 A0A1W2PQD8 194 aa14.6□□□□□ -0.07
APEX1-216ENST00000557159 ETF1P62495 437 aaKnown RBP14.6□□□□□ -0.07
APEX1-216ENST00000557159 OS9Q13438 667 aaPredicted RBP14.6□□□□□ -0.07
APEX1-216ENST00000557159 TMCO3Q6UWJ1 677 aa14.6□□□□□ -0.07
APEX1-216ENST00000557159 DCAF5Q96JK2 942 aa14.6□□□□□ -0.07
APEX1-216ENST00000557159 SLC52A2Q9HAB3 445 aa14.6□□□□□ -0.07
APEX1-216ENST00000557159 ORC3Q9UBD5 711 aaPredicted RBP14.6□□□□□ -0.07
APEX1-216ENST00000557159 EFCAB8A8MWE9 144 aa14.59□□□□□ -0.07
APEX1-216ENST00000557159 H3BQV1 296 aa14.59□□□□□ -0.07
APEX1-216ENST00000557159 KCNQ3O43525 872 aa14.59□□□□□ -0.07
APEX1-216ENST00000557159 HNRNPH2P55795 449 aaKnown RBP14.59□□□□□ -0.07
APEX1-216ENST00000557159 IFFO2Q5TF58 517 aa14.59□□□□□ -0.07
APEX1-216ENST00000557159 DDX21Q9NR30 783 aaKnown RBP eCLIP14.59□□□□□ -0.07
APEX1-216ENST00000557159 TRMT1Q9NXH9 659 aaKnown RBP14.59□□□□□ -0.07
APEX1-216ENST00000557159 PSD3Q9NYI0 1048 aa14.59□□□□□ -0.07
APEX1-216ENST00000557159 BRWD3Q6RI45 1802 aa14.59□□□□□ -0.07
APEX1-216ENST00000557159 UTYO14607 1347 aa14.59□□□□□ -0.07
APEX1-216ENST00000557159 SFPQP23246 707 aaKnown RBP eCLIP14.59□□□□□ -0.07
APEX1-216ENST00000557159 ARHGAP29Q52LW3 1261 aa14.59□□□□□ -0.07
APEX1-216ENST00000557159 CCDC158Q5M9N0 1113 aa14.59□□□□□ -0.07
APEX1-216ENST00000557159 FAM182BQ5T319 152 aa14.59□□□□□ -0.07
APEX1-216ENST00000557159 ZNF790Q6PG37 636 aa14.59□□□□□ -0.07
APEX1-216ENST00000557159 RGS22Q8NE09 1264 aa14.59□□□□□ -0.07
APEX1-216ENST00000557159 FAM227BQ96M60 508 aa14.59□□□□□ -0.07
APEX1-216ENST00000557159 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.59□□□□□ -0.07
APEX1-216ENST00000557159 DNAI1Q9UI46 699 aa14.59□□□□□ -0.07
APEX1-216ENST00000557159 BCL9O00512 1426 aa14.58□□□□□ -0.07
APEX1-216ENST00000557159 MYO1BO43795 1136 aa14.58□□□□□ -0.08
APEX1-216ENST00000557159 PFKFB2O60825 505 aa14.58□□□□□ -0.08
APEX1-216ENST00000557159 HMGB1P09429 215 aaKnown RBP14.58□□□□□ -0.08
APEX1-216ENST00000557159 GPS2Q13227 327 aa14.58□□□□□ -0.08
APEX1-216ENST00000557159 UBXN4Q92575 508 aa14.58□□□□□ -0.08
APEX1-216ENST00000557159 A0A0D9SFI3 127 aa14.57□□□□□ -0.08
APEX1-216ENST00000557159 ZBTB22O15209 634 aa14.57□□□□□ -0.08
APEX1-216ENST00000557159 TADA3O75528 432 aa14.57□□□□□ -0.08
APEX1-216ENST00000557159 TAF5LO75529 589 aa14.57□□□□□ -0.08
APEX1-216ENST00000557159 ARMCX5Q6P1M9 558 aa14.57□□□□□ -0.08
APEX1-216ENST00000557159 SYT10Q6XYQ8 523 aa14.57□□□□□ -0.08
APEX1-216ENST00000557159 AACSQ86V21 672 aa14.57□□□□□ -0.08
APEX1-216ENST00000557159 NEK1Q96PY6 1258 aa14.57□□□□□ -0.08
APEX1-216ENST00000557159 GOLPH3LQ9H4A5 285 aa14.57□□□□□ -0.08
APEX1-216ENST00000557159 KDM6AO15550 1401 aaPredicted RBP14.57□□□□□ -0.08
APEX1-216ENST00000557159 ERICH4A6NGS2 130 aa14.57□□□□□ -0.08
APEX1-216ENST00000557159 IKBKBO14920 756 aa14.57□□□□□ -0.08
APEX1-216ENST00000557159 LRRFIP1Q32MZ4 808 aaKnown RBP14.57□□□□□ -0.08
APEX1-216ENST00000557159 ADALQ6DHV7 355 aa14.57□□□□□ -0.08
APEX1-216ENST00000557159 FMR1NBQ8N0W7 255 aaPredicted RBP14.57□□□□□ -0.08
APEX1-216ENST00000557159 MSL3Q8N5Y2 521 aaKnown RBP14.57□□□□□ -0.08
APEX1-216ENST00000557159 AOPEPQ8N6M6 819 aa14.57□□□□□ -0.08
APEX1-216ENST00000557159 LINS1Q8NG48 757 aa14.57□□□□□ -0.08
APEX1-216ENST00000557159 AGXT2Q9BYV1 514 aa14.57□□□□□ -0.08
APEX1-216ENST00000557159 ST7Q9NRC1 585 aa14.57□□□□□ -0.08
APEX1-216ENST00000557159 FEZ2Q9UHY8 353 aaPredicted RBP14.57□□□□□ -0.08
APEX1-216ENST00000557159 U3KPZ7 1027 aaPredicted RBP14.57□□□□□ -0.08
APEX1-216ENST00000557159 JAK2O60674 1132 aa14.56□□□□□ -0.08
APEX1-216ENST00000557159 FAM196AQ6ZSG2 479 aa14.56□□□□□ -0.08
APEX1-216ENST00000557159 TMX1Q9H3N1 280 aa14.56□□□□□ -0.08
APEX1-216ENST00000557159 C9orf78Q9NZ63 289 aaPredicted RBP14.56□□□□□ -0.08
APEX1-216ENST00000557159 MAP3K2Q9Y2U5 619 aa14.56□□□□□ -0.08
APEX1-216ENST00000557159 SALL1Q9NSC2 1324 aa14.55□□□□□ -0.08
APEX1-216ENST00000557159 GOLGA6L9A6NEM1 432 aa14.55□□□□□ -0.08
APEX1-216ENST00000557159 RAD51AP2Q09MP3 1159 aa14.55□□□□□ -0.08
APEX1-216ENST00000557159 TRIM65Q6PJ69 517 aa14.55□□□□□ -0.08
APEX1-216ENST00000557159 GPR161Q8N6U8 529 aaKnown RBP14.55□□□□□ -0.08
APEX1-216ENST00000557159 IQUBQ8NA54 791 aa14.55□□□□□ -0.08
APEX1-216ENST00000557159 MRPS27Q92552 414 aaKnown RBP14.55□□□□□ -0.08
APEX1-216ENST00000557159 MPHOSPH8Q99549 860 aa14.55□□□□□ -0.08
APEX1-216ENST00000557159 EFCC1Q9HA90 598 aa14.55□□□□□ -0.08
APEX1-216ENST00000557159 KIAA1468Q9P260 1216 aa14.55□□□□□ -0.08
APEX1-216ENST00000557159 ERVV-2B6SEH9 535 aa14.55□□□□□ -0.08
APEX1-216ENST00000557159 COL9A3Q14050 684 aaPredicted RBP14.55□□□□□ -0.08
APEX1-216ENST00000557159 JAKMIP3Q5VZ66 844 aa14.55□□□□□ -0.08
APEX1-216ENST00000557159 TTC5Q8N0Z6 440 aa14.55□□□□□ -0.08
APEX1-216ENST00000557159 NSUN7Q8NE18 718 aaKnown RBP14.55□□□□□ -0.08
APEX1-216ENST00000557159 FSD1Q9BTV5 496 aa14.55□□□□□ -0.08
APEX1-216ENST00000557159 RTEL1Q9NZ71 1219 aa14.55□□□□□ -0.08
APEX1-216ENST00000557159 LAMA4Q16363 1823 aa14.54□□□□□ -0.08
APEX1-216ENST00000557159 SASH1O94885 1247 aa14.54□□□□□ -0.08
APEX1-216ENST00000557159 SNRPA1P09661 255 aaKnown RBP14.54□□□□□ -0.08
APEX1-216ENST00000557159 NEXNQ0ZGT2 675 aa14.54□□□□□ -0.08
APEX1-216ENST00000557159 FBXL16Q8N461 479 aa14.54□□□□□ -0.08
APEX1-216ENST00000557159 FSIP1Q8NA03 581 aa14.54□□□□□ -0.08
APEX1-216ENST00000557159 NFATC2IPQ8NCF5 419 aa14.54□□□□□ -0.08
APEX1-216ENST00000557159 EAF2Q96CJ1 260 aaPredicted RBP14.54□□□□□ -0.08
APEX1-216ENST00000557159 USP28Q96RU2 1077 aa14.54□□□□□ -0.08
APEX1-216ENST00000557159 XPO4Q9C0E2 1151 aaKnown RBP14.54□□□□□ -0.08
APEX1-216ENST00000557159 CWC15Q9P013 229 aaKnown RBP14.54□□□□□ -0.08
APEX1-216ENST00000557159 SCRN1Q12765 414 aa14.53□□□□□ -0.08
APEX1-216ENST00000557159 EXOC4Q96A65 974 aa14.53□□□□□ -0.08
APEX1-216ENST00000557159 KAT6BQ8WYB5 2073 aa14.53□□□□□ -0.08
APEX1-216ENST00000557159 ZSCAN12O43309 604 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms