RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 SLC26A6Q9BXS9 759 aa17.91■□□□□ 0.46
TMEM55B-207ENST00000557041 SLC5A1P13866 664 aa17.9■□□□□ 0.46
TMEM55B-207ENST00000557041 NSUN7Q8NE18 718 aaKnown RBP17.9■□□□□ 0.46
TMEM55B-207ENST00000557041 TTLL11Q8NHH1 800 aa17.9■□□□□ 0.46
TMEM55B-207ENST00000557041 RGPD2P0DJD1 1756 aa17.9■□□□□ 0.46
TMEM55B-207ENST00000557041 PCCAP05165 728 aaPredicted RBP17.9■□□□□ 0.46
TMEM55B-207ENST00000557041 MCAMP43121 646 aa17.9■□□□□ 0.46
TMEM55B-207ENST00000557041 BCAMP50895 628 aa17.9■□□□□ 0.46
TMEM55B-207ENST00000557041 CCDC102BQ68D86 513 aa17.9■□□□□ 0.46
TMEM55B-207ENST00000557041 MAP3K15Q6ZN16 1313 aa17.9■□□□□ 0.46
TMEM55B-207ENST00000557041 RGPD1P0DJD0 1748 aa17.9■□□□□ 0.46
TMEM55B-207ENST00000557041 ZSCAN16Q9H4T2 348 aaPredicted RBP17.89■□□□□ 0.46
TMEM55B-207ENST00000557041 WWC3Q9ULE0 1092 aa17.89■□□□□ 0.46
TMEM55B-207ENST00000557041 NALCNQ8IZF0 1738 aa17.89■□□□□ 0.45
TMEM55B-207ENST00000557041 hCG_1642624A0A1W2PR95 340 aa17.89■□□□□ 0.45
TMEM55B-207ENST00000557041 GOLGA8AA7E2F4 631 aa17.89■□□□□ 0.45
TMEM55B-207ENST00000557041 GLIPR1L2Q4G1C9 344 aa17.89■□□□□ 0.45
TMEM55B-207ENST00000557041 C16orf45Q96MC5 204 aaPredicted RBP17.89■□□□□ 0.45
TMEM55B-207ENST00000557041 DSCC1Q9BVC3 393 aa17.89■□□□□ 0.45
TMEM55B-207ENST00000557041 ZFYP08048 801 aaPredicted RBP17.89■□□□□ 0.45
TMEM55B-207ENST00000557041 PDILTQ8N807 584 aa17.89■□□□□ 0.45
TMEM55B-207ENST00000557041 ALG1Q9BT22 464 aa17.89■□□□□ 0.45
TMEM55B-207ENST00000557041 CBX8Q9HC52 389 aa17.89■□□□□ 0.45
TMEM55B-207ENST00000557041 RANBP6O60518 1105 aaKnown RBP17.88■□□□□ 0.45
TMEM55B-207ENST00000557041 PRDM1O75626 825 aa17.88■□□□□ 0.45
TMEM55B-207ENST00000557041 SPECC1Q5M775 1068 aa17.88■□□□□ 0.45
TMEM55B-207ENST00000557041 LRP10Q7Z4F1 713 aa17.88■□□□□ 0.45
TMEM55B-207ENST00000557041 OFD1O75665 1012 aa17.88■□□□□ 0.45
TMEM55B-207ENST00000557041 CASP7P55210 303 aa17.88■□□□□ 0.45
TMEM55B-207ENST00000557041 NOLC1Q14978 699 aaKnown RBP eCLIP17.88■□□□□ 0.45
TMEM55B-207ENST00000557041 PGBD1Q96JS3 809 aa17.88■□□□□ 0.45
TMEM55B-207ENST00000557041 CLIP2Q9UDT6 1046 aa17.88■□□□□ 0.45
TMEM55B-207ENST00000557041 SLC12A7Q9Y666 1083 aa17.88■□□□□ 0.45
TMEM55B-207ENST00000557041 SLC4A4Q9Y6R1 1079 aa17.88■□□□□ 0.45
TMEM55B-207ENST00000557041 TRMT1Q9NXH9 659 aaKnown RBP17.88■□□□□ 0.45
TMEM55B-207ENST00000557041 MED23Q9ULK4 1368 aa17.88■□□□□ 0.45
TMEM55B-207ENST00000557041 NGLY1Q96IV0 654 aa17.87■□□□□ 0.45
TMEM55B-207ENST00000557041 COL15A1P39059 1388 aa17.87■□□□□ 0.45
TMEM55B-207ENST00000557041 PDE8AO60658 829 aa17.87■□□□□ 0.45
TMEM55B-207ENST00000557041 NACAP1Q9BZK3 213 aa17.87■□□□□ 0.45
TMEM55B-207ENST00000557041 PFKFB2O60825 505 aa17.86■□□□□ 0.45
TMEM55B-207ENST00000557041 CYP7A1P22680 504 aa17.86■□□□□ 0.45
TMEM55B-207ENST00000557041 LRMPQ12912 555 aa17.86■□□□□ 0.45
TMEM55B-207ENST00000557041 SAFBQ15424 915 aaKnown RBP eCLIP17.86■□□□□ 0.45
TMEM55B-207ENST00000557041 UBAC1Q9BSL1 405 aa17.86■□□□□ 0.45
TMEM55B-207ENST00000557041 UTP14AQ9BVJ6 771 aaKnown RBP17.86■□□□□ 0.45
TMEM55B-207ENST00000557041 PIH1D3Q9NQM4 214 aaKnown RBP17.86■□□□□ 0.45
TMEM55B-207ENST00000557041 XRN1Q8IZH2 1706 aaKnown RBP17.86■□□□□ 0.45
TMEM55B-207ENST00000557041 SH3TC1Q8TE82 1336 aa17.86■□□□□ 0.45
TMEM55B-207ENST00000557041 PRKAB2O43741 272 aa17.86■□□□□ 0.45
TMEM55B-207ENST00000557041 IARSP41252 1262 aaKnown RBP17.86■□□□□ 0.45
TMEM55B-207ENST00000557041 TPD52L1Q16890 204 aaPredicted RBP17.86■□□□□ 0.45
TMEM55B-207ENST00000557041 C8orf37Q96NL8 207 aa17.86■□□□□ 0.45
TMEM55B-207ENST00000557041 NRBP1Q9UHY1 535 aa17.86■□□□□ 0.45
TMEM55B-207ENST00000557041 ZBTB43O43298 467 aa17.86■□□□□ 0.45
TMEM55B-207ENST00000557041 PDE8BO95263 885 aa17.86■□□□□ 0.45
TMEM55B-207ENST00000557041 SART3Q15020 963 aaKnown RBP17.86■□□□□ 0.45
TMEM55B-207ENST00000557041 FAM98CQ17RN3 349 aaKnown RBP17.86■□□□□ 0.45
TMEM55B-207ENST00000557041 UVSSAQ2YD98 709 aa17.86■□□□□ 0.45
TMEM55B-207ENST00000557041 ISCA1Q9BUE6 129 aa17.86■□□□□ 0.45
TMEM55B-207ENST00000557041 PDE6AP16499 860 aa17.85■□□□□ 0.45
TMEM55B-207ENST00000557041 VSIG10Q8N0Z9 540 aa17.85■□□□□ 0.45
TMEM55B-207ENST00000557041 MFSD6Q6ZSS7 791 aa17.85■□□□□ 0.45
TMEM55B-207ENST00000557041 AOPEPQ8N6M6 819 aa17.85■□□□□ 0.45
TMEM55B-207ENST00000557041 GYG1P46976 350 aa17.84■□□□□ 0.45
TMEM55B-207ENST00000557041 SDR42E1Q8WUS8 393 aa17.84■□□□□ 0.45
TMEM55B-207ENST00000557041 KCNQ2O43526 872 aa17.84■□□□□ 0.45
TMEM55B-207ENST00000557041 TTF1Q15361 905 aaPredicted RBP17.84■□□□□ 0.45
TMEM55B-207ENST00000557041 SUSD4Q5VX71 490 aa17.84■□□□□ 0.45
TMEM55B-207ENST00000557041 CLIC4Q9Y696 253 aa17.84■□□□□ 0.45
TMEM55B-207ENST00000557041 CEP57L1Q8IYX8 460 aa17.84■□□□□ 0.45
TMEM55B-207ENST00000557041 PDLIM2Q96JY6 352 aa17.84■□□□□ 0.45
TMEM55B-207ENST00000557041 MRVI1Q9Y6F6 885 aa17.84■□□□□ 0.45
TMEM55B-207ENST00000557041 TCHHQ07283 1943 aa17.83■□□□□ 0.45
TMEM55B-207ENST00000557041 TPM2P07951 284 aa17.83■□□□□ 0.45
TMEM55B-207ENST00000557041 RESTQ13127 1097 aa17.83■□□□□ 0.45
TMEM55B-207ENST00000557041 CCDC152Q4G0S7 254 aa17.83■□□□□ 0.45
TMEM55B-207ENST00000557041 RASSF8Q8NHQ8 419 aa17.83■□□□□ 0.45
TMEM55B-207ENST00000557041 CRKLP46109 303 aaKnown RBP17.83■□□□□ 0.44
TMEM55B-207ENST00000557041 PUM3Q15397 648 aaKnown RBP17.83■□□□□ 0.44
TMEM55B-207ENST00000557041 SPATA5Q8NB90 893 aa17.83■□□□□ 0.44
TMEM55B-207ENST00000557041 CLSTN2Q9H4D0 955 aa17.83■□□□□ 0.44
TMEM55B-207ENST00000557041 SPTLC2O15270 562 aa17.82■□□□□ 0.44
TMEM55B-207ENST00000557041 TRIM22Q8IYM9 498 aa17.82■□□□□ 0.44
TMEM55B-207ENST00000557041 CYP19A1P11511 503 aaPredicted RBP17.82■□□□□ 0.44
TMEM55B-207ENST00000557041 MRPS27Q92552 414 aaKnown RBP17.82■□□□□ 0.44
TMEM55B-207ENST00000557041 CIAO1O76071 339 aa17.82■□□□□ 0.44
TMEM55B-207ENST00000557041 TPM4P67936 248 aa17.82■□□□□ 0.44
TMEM55B-207ENST00000557041 PTPN21Q16825 1174 aa17.82■□□□□ 0.44
TMEM55B-207ENST00000557041 TMEM87AQ8NBN3 555 aa17.82■□□□□ 0.44
TMEM55B-207ENST00000557041 TFCP2L1Q9NZI6 479 aa17.82■□□□□ 0.44
TMEM55B-207ENST00000557041 ANGEL1Q9UNK9 670 aaKnown RBP17.82■□□□□ 0.44
TMEM55B-207ENST00000557041 KCNJ14Q9UNX9 436 aa17.82■□□□□ 0.44
TMEM55B-207ENST00000557041 LOC102724428A0A0B4J2F2 783 aa17.81■□□□□ 0.44
TMEM55B-207ENST00000557041 SLC3A2P08195 630 aaKnown RBP17.81■□□□□ 0.44
TMEM55B-207ENST00000557041 PDIA4P13667 645 aaKnown RBP17.81■□□□□ 0.44
TMEM55B-207ENST00000557041 CDK11BP21127 795 aaKnown RBP17.81■□□□□ 0.44
TMEM55B-207ENST00000557041 SIK1P57059 783 aa17.81■□□□□ 0.44
TMEM55B-207ENST00000557041 USPL1Q5W0Q7 1092 aa17.81■□□□□ 0.44
TMEM55B-207ENST00000557041 CCDC87Q9NVE4 849 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms