RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 IKBKEQ14164 716 aa8.87□□□□□ -0.99
LINC00648-203ENST00000556923 USPL1Q5W0Q7 1092 aa8.87□□□□□ -0.99
LINC00648-203ENST00000556923 ARMC10Q8N2F6 343 aa8.87□□□□□ -0.99
LINC00648-203ENST00000556923 FAM129BQ96TA1 746 aa8.87□□□□□ -0.99
LINC00648-203ENST00000556923 CEP41Q9BYV8 373 aa8.87□□□□□ -0.99
LINC00648-203ENST00000556923 A0A1W2PP55 124 aa8.85□□□□□ -0.99
LINC00648-203ENST00000556923 FSTP19883 344 aa8.85□□□□□ -0.99
LINC00648-203ENST00000556923 ARL4DP49703 201 aa8.85□□□□□ -0.99
LINC00648-203ENST00000556923 ORC1Q13415 861 aa8.85□□□□□ -0.99
LINC00648-203ENST00000556923 CCER1Q8TC90 406 aaPredicted RBP8.85□□□□□ -0.99
LINC00648-203ENST00000556923 FAM46AQ96IP4 442 aaKnown RBP8.85□□□□□ -0.99
LINC00648-203ENST00000556923 RAXQ9Y2V3 346 aa8.85□□□□□ -0.99
LINC00648-203ENST00000556923 GPR182O15218 404 aa8.84□□□□□ -0.99
LINC00648-203ENST00000556923 IGHA2P01877 340 aa8.84□□□□□ -0.99
LINC00648-203ENST00000556923 ESRRAP11474 423 aaPredicted RBP8.84□□□□□ -0.99
LINC00648-203ENST00000556923 PDE3BQ13370 1112 aa8.84□□□□□ -0.99
LINC00648-203ENST00000556923 UVSSAQ2YD98 709 aa8.84□□□□□ -0.99
LINC00648-203ENST00000556923 TCF12Q99081 682 aa8.84□□□□□ -0.99
LINC00648-203ENST00000556923 ARTNQ5T4W7 220 aa8.83□□□□□ -1
LINC00648-203ENST00000556923 CCNJLQ8IV13 435 aa8.83□□□□□ -1
LINC00648-203ENST00000556923 UTP4Q969X6 686 aaKnown RBP8.83□□□□□ -1
LINC00648-203ENST00000556923 CITED4Q96RK1 184 aa8.83□□□□□ -1
LINC00648-203ENST00000556923 RUSC1Q9BVN2 902 aa8.83□□□□□ -1
LINC00648-203ENST00000556923 RNF208Q9H0X6 261 aa8.83□□□□□ -1
LINC00648-203ENST00000556923 SOX17Q9H6I2 414 aaPredicted RBP8.83□□□□□ -1
LINC00648-203ENST00000556923 SOWAHDA6NJG2 315 aa8.82□□□□□ -1
LINC00648-203ENST00000556923 DHX15O43143 795 aaKnown RBP8.82□□□□□ -1
LINC00648-203ENST00000556923 NEFLP07196 543 aa8.82□□□□□ -1
LINC00648-203ENST00000556923 GRIA4P48058 902 aa8.82□□□□□ -1
LINC00648-203ENST00000556923 PREPP48147 710 aa8.82□□□□□ -1
LINC00648-203ENST00000556923 LIN7BQ9HAP6 207 aa8.82□□□□□ -1
LINC00648-203ENST00000556923 ZFP64Q9NPA5 681 aa8.82□□□□□ -1
LINC00648-203ENST00000556923 A0A096LPE4 126 aa8.81□□□□□ -1
LINC00648-203ENST00000556923 A0A1W2PPZ6 126 aa8.81□□□□□ -1
LINC00648-203ENST00000556923 CPNE3O75131 537 aaKnown RBP8.81□□□□□ -1
LINC00648-203ENST00000556923 LRP8Q14114 963 aa8.81□□□□□ -1
LINC00648-203ENST00000556923 SPRED3Q2MJR0 410 aa8.81□□□□□ -1
LINC00648-203ENST00000556923 ANKRD34AQ69YU3 496 aa8.81□□□□□ -1
LINC00648-203ENST00000556923 MYRFLQ96LU7 910 aa8.81□□□□□ -1
LINC00648-203ENST00000556923 USP26Q9BXU7 913 aa8.81□□□□□ -1
LINC00648-203ENST00000556923 NPHS2Q9NP85 383 aa8.81□□□□□ -1
LINC00648-203ENST00000556923 STOML1Q9UBI4 398 aa8.81□□□□□ -1
LINC00648-203ENST00000556923 RNF112Q9ULX5 631 aa8.81□□□□□ -1
LINC00648-203ENST00000556923 LOC100289279A0A1B0GTE1 492 aa8.8□□□□□ -1
LINC00648-203ENST00000556923 KIAA0319Q5VV43 1072 aa8.8□□□□□ -1
LINC00648-203ENST00000556923 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.8□□□□□ -1
LINC00648-203ENST00000556923 TMC1Q8TDI8 760 aa8.8□□□□□ -1
LINC00648-203ENST00000556923 NIF3L1Q9GZT8 377 aa8.8□□□□□ -1
LINC00648-203ENST00000556923 GNEQ9Y223 722 aaKnown RBP8.8□□□□□ -1
LINC00648-203ENST00000556923 MEGF11A6BM72 1044 aa8.79□□□□□ -1
LINC00648-203ENST00000556923 DLGAP3O95886 979 aa8.79□□□□□ -1
LINC00648-203ENST00000556923 GSTM4Q03013 218 aa8.79□□□□□ -1
LINC00648-203ENST00000556923 SLC51AQ86UW1 340 aa8.79□□□□□ -1
LINC00648-203ENST00000556923 RBCK1Q9BYM8 510 aa8.79□□□□□ -1
LINC00648-203ENST00000556923 CLEC4MQ9H2X3 399 aaPredicted RBP8.79□□□□□ -1
LINC00648-203ENST00000556923 EIF1AYO14602 144 aaKnown RBP8.78□□□□□ -1
LINC00648-203ENST00000556923 SART1O43290 800 aaKnown RBP8.78□□□□□ -1
LINC00648-203ENST00000556923 HYAL3O43820 417 aaPredicted RBP8.78□□□□□ -1
LINC00648-203ENST00000556923 BRD1O95696 1058 aa8.78□□□□□ -1
LINC00648-203ENST00000556923 PCDH1Q08174 1060 aa8.78□□□□□ -1
LINC00648-203ENST00000556923 ZNF423Q2M1K9 1284 aa8.78□□□□□ -1
LINC00648-203ENST00000556923 FDX2Q6P4F2 183 aa8.78□□□□□ -1
LINC00648-203ENST00000556923 FAM20CQ8IXL6 584 aa8.78□□□□□ -1
LINC00648-203ENST00000556923 TMPRSS13Q9BYE2 586 aa8.78□□□□□ -1
LINC00648-203ENST00000556923 NRSN2Q9GZP1 204 aa8.78□□□□□ -1
LINC00648-203ENST00000556923 C7orf69Q9H7B7 122 aa8.78□□□□□ -1
LINC00648-203ENST00000556923 HMX2A2RU54 273 aa8.77□□□□□ -1.01
LINC00648-203ENST00000556923 IGLV1-40P01703 118 aa8.77□□□□□ -1.01
LINC00648-203ENST00000556923 TRIM42Q8IWZ5 723 aa8.77□□□□□ -1.01
LINC00648-203ENST00000556923 CCDC74AQ96AQ1 378 aa8.77□□□□□ -1.01
LINC00648-203ENST00000556923 DMRTB1Q96MA1 342 aa8.77□□□□□ -1.01
LINC00648-203ENST00000556923 DNAJC25Q9H1X3 360 aa8.77□□□□□ -1.01
LINC00648-203ENST00000556923 EHD4Q9H223 541 aa8.77□□□□□ -1.01
LINC00648-203ENST00000556923 GSC2O15499 205 aa8.76□□□□□ -1.01
LINC00648-203ENST00000556923 BMP3P12645 472 aa8.76□□□□□ -1.01
LINC00648-203ENST00000556923 NUTM2GQ5VZR2 741 aa8.76□□□□□ -1.01
LINC00648-203ENST00000556923 ALKBH8Q96BT7 664 aaKnown RBP8.76□□□□□ -1.01
LINC00648-203ENST00000556923 TIAF1O95411 115 aa8.75□□□□□ -1.01
LINC00648-203ENST00000556923 NFIAQ12857 509 aa8.75□□□□□ -1.01
LINC00648-203ENST00000556923 TMC7Q7Z402 723 aa8.75□□□□□ -1.01
LINC00648-203ENST00000556923 SMG8Q8ND04 991 aaKnown RBP8.75□□□□□ -1.01
LINC00648-203ENST00000556923 CSRNP1Q96S65 589 aa8.75□□□□□ -1.01
LINC00648-203ENST00000556923 ZNF576Q9H609 170 aa8.75□□□□□ -1.01
LINC00648-203ENST00000556923 SUGCTQ9HAC7 445 aa8.75□□□□□ -1.01
LINC00648-203ENST00000556923 ABCB6Q9NP58 842 aa8.75□□□□□ -1.01
LINC00648-203ENST00000556923 BIN2Q9UBW5 565 aaPredicted RBP8.75□□□□□ -1.01
LINC00648-203ENST00000556923 ITPKAP23677 461 aa8.74□□□□□ -1.01
LINC00648-203ENST00000556923 EXOSC6Q5RKV6 272 aaKnown RBP8.74□□□□□ -1.01
LINC00648-203ENST00000556923 BEND4Q6ZU67 534 aa8.74□□□□□ -1.01
LINC00648-203ENST00000556923 CLEC10AQ8IUN9 316 aa8.74□□□□□ -1.01
LINC00648-203ENST00000556923 FAM83CQ9BQN1 747 aa8.74□□□□□ -1.01
LINC00648-203ENST00000556923 KCNF1Q9H3M0 494 aa8.74□□□□□ -1.01
LINC00648-203ENST00000556923 CYP4F12Q9HCS2 524 aa8.74□□□□□ -1.01
LINC00648-203ENST00000556923 HIF3AQ9Y2N7 669 aa8.74□□□□□ -1.01
LINC00648-203ENST00000556923 GAS2O43903 313 aaKnown RBP8.73□□□□□ -1.01
LINC00648-203ENST00000556923 CTSBP07858 339 aa8.73□□□□□ -1.01
LINC00648-203ENST00000556923 SGO2Q562F6 1265 aa8.73□□□□□ -1.01
LINC00648-203ENST00000556923 RNF43Q68DV7 783 aa8.73□□□□□ -1.01
LINC00648-203ENST00000556923 PRPF40BQ6NWY9 871 aaKnown RBP8.73□□□□□ -1.01
LINC00648-203ENST00000556923 C12orf50Q8NA57 414 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms