RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 CFAP74Q9C0B2 1584 aa6.33□□□□□ -1.4
ATXN3-241ENST00000556374 UBAP1LF5GYI3 381 aa6.33□□□□□ -1.4
ATXN3-241ENST00000556374 NOS3P29474 1203 aa6.33□□□□□ -1.4
ATXN3-241ENST00000556374 TMEM164Q5U3C3 297 aa6.33□□□□□ -1.4
ATXN3-241ENST00000556374 STK32AQ8WU08 396 aa6.33□□□□□ -1.4
ATXN3-241ENST00000556374 KRTAP4-12Q9BQ66 201 aa6.33□□□□□ -1.4
ATXN3-241ENST00000556374 SAP130Q9H0E3 1048 aa6.33□□□□□ -1.4
ATXN3-241ENST00000556374 AKTIPQ9H8T0 292 aa6.33□□□□□ -1.4
ATXN3-241ENST00000556374 PPME1Q9Y570 386 aa6.33□□□□□ -1.4
ATXN3-241ENST00000556374 ZFYVE16Q7Z3T8 1539 aa6.33□□□□□ -1.4
ATXN3-241ENST00000556374 ARHGEF12Q9NZN5 1544 aa6.33□□□□□ -1.4
ATXN3-241ENST00000556374 GSC2O15499 205 aa6.32□□□□□ -1.4
ATXN3-241ENST00000556374 SMNDC1O75940 238 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATXN3-241ENST00000556374 ZAP70P43403 619 aa6.32□□□□□ -1.4
ATXN3-241ENST00000556374 RANGAP1P46060 587 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-241ENST00000556374 IREB2P48200 963 aaKnown RBP6.32□□□□□ -1.4
ATXN3-241ENST00000556374 MLLT1Q03111 559 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-241ENST00000556374 TRIP4Q15650 581 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-241ENST00000556374 TTC39BQ5VTQ0 682 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-241ENST00000556374 PRR23CQ6ZRP0 262 aa6.32□□□□□ -1.4
ATXN3-241ENST00000556374 IL22RA1Q8N6P7 574 aa6.32□□□□□ -1.4
ATXN3-241ENST00000556374 WNT8BQ93098 351 aa6.32□□□□□ -1.4
ATXN3-241ENST00000556374 ABI2Q9NYB9 513 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-241ENST00000556374 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-241ENST00000556374 F8W735 103 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-241ENST00000556374 J3QW42 95 aa6.31□□□□□ -1.4
ATXN3-241ENST00000556374 SETDB1Q15047 1291 aa6.31□□□□□ -1.4
ATXN3-241ENST00000556374 UVSSAQ2YD98 709 aa6.31□□□□□ -1.4
ATXN3-241ENST00000556374 HFE2Q6ZVN8 426 aa6.31□□□□□ -1.4
ATXN3-241ENST00000556374 KLHL23Q8NBE8 558 aa6.31□□□□□ -1.4
ATXN3-241ENST00000556374 PMEPA1Q969W9 287 aa6.31□□□□□ -1.4
ATXN3-241ENST00000556374 CCDC97Q96F63 343 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-241ENST00000556374 USP20Q9Y2K6 914 aa6.31□□□□□ -1.4
ATXN3-241ENST00000556374 GTF3C3Q9Y5Q9 886 aa6.31□□□□□ -1.4
ATXN3-241ENST00000556374 UHRF1BP1Q6BDS2 1440 aa6.31□□□□□ -1.4
ATXN3-241ENST00000556374 AKNAQ7Z591 1439 aa6.31□□□□□ -1.4
ATXN3-241ENST00000556374 SETD1BQ9UPS6 1966 aaKnown RBP6.31□□□□□ -1.4
ATXN3-241ENST00000556374 RAPGEF3O95398 923 aa6.3□□□□□ -1.4
ATXN3-241ENST00000556374 NSUN5Q96P11 429 aaKnown RBP6.3□□□□□ -1.4
ATXN3-241ENST00000556374 TIAM1Q13009 1591 aa6.3□□□□□ -1.4
ATXN3-241ENST00000556374 MAP3K1Q13233 1512 aa6.3□□□□□ -1.4
ATXN3-241ENST00000556374 C3P01024 1663 aa6.3□□□□□ -1.4
ATXN3-241ENST00000556374 EIF4EBP3O60516 100 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-241ENST00000556374 PPP1R15AO75807 674 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-241ENST00000556374 PCSK2P16519 638 aa6.29□□□□□ -1.4
ATXN3-241ENST00000556374 GDF6Q6KF10 455 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-241ENST00000556374 FAM117BQ6P1L5 589 aa6.29□□□□□ -1.4
ATXN3-241ENST00000556374 MEGF10Q96KG7 1140 aa6.29□□□□□ -1.4
ATXN3-241ENST00000556374 YTHDC1Q96MU7 727 aaKnown RBP6.29□□□□□ -1.4
ATXN3-241ENST00000556374 CEP41Q9BYV8 373 aa6.29□□□□□ -1.4
ATXN3-241ENST00000556374 ADAM19Q9H013 955 aa6.29□□□□□ -1.4
ATXN3-241ENST00000556374 RRBP1Q9P2E9 1410 aaKnown RBP6.29□□□□□ -1.4
ATXN3-241ENST00000556374 FHOD3Q2V2M9 1422 aa6.28□□□□□ -1.4
ATXN3-241ENST00000556374 FAM177BA6PVY3 158 aa6.28□□□□□ -1.4
ATXN3-241ENST00000556374 BTBD11A6QL63 1104 aa6.28□□□□□ -1.4
ATXN3-241ENST00000556374 ATP2B4P23634 1241 aa6.28□□□□□ -1.4
ATXN3-241ENST00000556374 CDC27P30260 824 aa6.28□□□□□ -1.4
ATXN3-241ENST00000556374 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.28□□□□□ -1.4
ATXN3-241ENST00000556374 CEP120Q8N960 986 aa6.28□□□□□ -1.4
ATXN3-241ENST00000556374 HELQQ8TDG4 1101 aa6.28□□□□□ -1.4
ATXN3-241ENST00000556374 PBX4Q9BYU1 374 aa6.28□□□□□ -1.4
ATXN3-241ENST00000556374 CARMIL1Q5VZK9 1371 aa6.28□□□□□ -1.4
ATXN3-241ENST00000556374 CCNB3Q8WWL7 1395 aa6.28□□□□□ -1.4
ATXN3-241ENST00000556374 DENND4BO75064 1496 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-241ENST00000556374 NCOA1Q15788 1441 aa6.27□□□□□ -1.41
ATXN3-241ENST00000556374 SCNN1AP37088 669 aa6.27□□□□□ -1.41
ATXN3-241ENST00000556374 ALKBH2Q6NS38 261 aa6.27□□□□□ -1.41
ATXN3-241ENST00000556374 ELP3Q9H9T3 547 aa6.27□□□□□ -1.41
ATXN3-241ENST00000556374 OSGEPQ9NPF4 335 aa6.27□□□□□ -1.41
ATXN3-241ENST00000556374 HECW1Q76N89 1606 aa6.27□□□□□ -1.41
ATXN3-241ENST00000556374 ARHGAP35Q9NRY4 1499 aa6.27□□□□□ -1.41
ATXN3-241ENST00000556374 SETD1AO15047 1707 aaKnown RBP6.26□□□□□ -1.41
ATXN3-241ENST00000556374 SUPT6HQ7KZ85 1726 aaKnown RBP6.26□□□□□ -1.41
ATXN3-241ENST00000556374 HYAL3O43820 417 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-241ENST00000556374 NPR3P17342 541 aa6.26□□□□□ -1.41
ATXN3-241ENST00000556374 PTPRAP18433 802 aa6.26□□□□□ -1.41
ATXN3-241ENST00000556374 CD68P34810 354 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-241ENST00000556374 EHHADHQ08426 723 aa6.26□□□□□ -1.41
ATXN3-241ENST00000556374 NAA30Q147X3 362 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-241ENST00000556374 FAM26DQ5JW98 314 aa6.26□□□□□ -1.41
ATXN3-241ENST00000556374 CEP135Q66GS9 1140 aa6.26□□□□□ -1.41
ATXN3-241ENST00000556374 GPR152Q8TDT2 470 aa6.26□□□□□ -1.41
ATXN3-241ENST00000556374 SALL4Q9UJQ4 1053 aa6.26□□□□□ -1.41
ATXN3-241ENST00000556374 TRIM33Q9UPN9 1127 aa6.26□□□□□ -1.41
ATXN3-241ENST00000556374 DHX57Q6P158 1386 aaKnown RBP6.26□□□□□ -1.41
ATXN3-241ENST00000556374 MAGI2Q86UL8 1455 aa6.26□□□□□ -1.41
ATXN3-241ENST00000556374 TM4SF5O14894 197 aa6.25□□□□□ -1.41
ATXN3-241ENST00000556374 MZF1P28698 734 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-241ENST00000556374 NCAPG2Q86XI2 1143 aa6.25□□□□□ -1.41
ATXN3-241ENST00000556374 NUDT16Q96DE0 195 aaKnown RBP6.25□□□□□ -1.41
ATXN3-241ENST00000556374 MKNK1Q9BUB5 465 aa6.25□□□□□ -1.41
ATXN3-241ENST00000556374 MTMR7Q9Y216 660 aa6.25□□□□□ -1.41
ATXN3-241ENST00000556374 RAXQ9Y2V3 346 aa6.25□□□□□ -1.41
ATXN3-241ENST00000556374 ZNF142P52746 1687 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-241ENST00000556374 CAMSAP1Q5T5Y3 1602 aa6.25□□□□□ -1.41
ATXN3-241ENST00000556374 FYCO1Q9BQS8 1478 aa6.24□□□□□ -1.41
ATXN3-241ENST00000556374 FSCN2O14926 492 aa6.24□□□□□ -1.41
ATXN3-241ENST00000556374 ZBTB39O15060 712 aa6.24□□□□□ -1.41
ATXN3-241ENST00000556374 DHX15O43143 795 aaKnown RBP6.24□□□□□ -1.41
ATXN3-241ENST00000556374 FSTP19883 344 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms