RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 MCAMP43121 646 aa13.4□□□□□ -0.26
TMEM260-208ENST00000555905 DCAF8Q5TAQ9 597 aa13.4□□□□□ -0.26
TMEM260-208ENST00000555905 TXNRD3Q86VQ6 643 aa13.4□□□□□ -0.26
TMEM260-208ENST00000555905 SPATA5Q8NB90 893 aa13.4□□□□□ -0.26
TMEM260-208ENST00000555905 SPDYE1Q8NFV5 336 aaPredicted RBP13.4□□□□□ -0.26
TMEM260-208ENST00000555905 PSMD1Q99460 953 aa13.4□□□□□ -0.26
TMEM260-208ENST00000555905 SYT17Q9BSW7 474 aa13.4□□□□□ -0.26
TMEM260-208ENST00000555905 SNRKQ9NRH2 765 aa13.4□□□□□ -0.26
TMEM260-208ENST00000555905 PAG1Q9NWQ8 432 aa13.4□□□□□ -0.26
TMEM260-208ENST00000555905 DENND2AQ9ULE3 1009 aa13.4□□□□□ -0.26
TMEM260-208ENST00000555905 AKAP11Q9UKA4 1901 aa13.4□□□□□ -0.26
TMEM260-208ENST00000555905 SNED1Q8TER0 1413 aa13.39□□□□□ -0.27
TMEM260-208ENST00000555905 GOLIM4O00461 696 aa13.39□□□□□ -0.27
TMEM260-208ENST00000555905 RASGRF1Q13972 1273 aa13.39□□□□□ -0.27
TMEM260-208ENST00000555905 SCARF1Q14162 830 aa13.39□□□□□ -0.27
TMEM260-208ENST00000555905 TTF1Q15361 905 aaPredicted RBP13.39□□□□□ -0.27
TMEM260-208ENST00000555905 CASC1Q6TDU7 716 aa13.39□□□□□ -0.27
TMEM260-208ENST00000555905 COA1Q9GZY4 146 aa13.39□□□□□ -0.27
TMEM260-208ENST00000555905 HMG20BQ9P0W2 317 aa13.39□□□□□ -0.27
TMEM260-208ENST00000555905 FER1L6Q2WGJ9 1857 aa13.38□□□□□ -0.27
TMEM260-208ENST00000555905 CDC45O75419 566 aa13.38□□□□□ -0.27
TMEM260-208ENST00000555905 ZAP70P43403 619 aa13.38□□□□□ -0.27
TMEM260-208ENST00000555905 FSD1Q9BTV5 496 aa13.38□□□□□ -0.27
TMEM260-208ENST00000555905 VPS33BQ9H267 617 aa13.38□□□□□ -0.27
TMEM260-208ENST00000555905 CD209Q9NNX6 404 aa13.38□□□□□ -0.27
TMEM260-208ENST00000555905 IQSEC3Q9UPP2 1182 aaPredicted RBP13.38□□□□□ -0.27
TMEM260-208ENST00000555905 NDUFB9Q9Y6M9 179 aa13.38□□□□□ -0.27
TMEM260-208ENST00000555905 PDS5AQ29RF7 1337 aaKnown RBP13.38□□□□□ -0.27
TMEM260-208ENST00000555905 IL1R1P14778 569 aa13.37□□□□□ -0.27
TMEM260-208ENST00000555905 LRRFIP1Q32MZ4 808 aaKnown RBP13.37□□□□□ -0.27
TMEM260-208ENST00000555905 PI16Q6UXB8 463 aa13.37□□□□□ -0.27
TMEM260-208ENST00000555905 TICAM2Q86XR7 235 aa13.37□□□□□ -0.27
TMEM260-208ENST00000555905 TDRD7Q8NHU6 1098 aaKnown RBP13.37□□□□□ -0.27
TMEM260-208ENST00000555905 TAOK3Q9H2K8 898 aa13.37□□□□□ -0.27
TMEM260-208ENST00000555905 HIP1O00291 1037 aa13.36□□□□□ -0.27
TMEM260-208ENST00000555905 PPIP5K2O43314 1243 aa13.36□□□□□ -0.27
TMEM260-208ENST00000555905 CYP2E1P05181 493 aaPredicted RBP13.36□□□□□ -0.27
TMEM260-208ENST00000555905 KIAA2012Q0VF49 1180 aa13.36□□□□□ -0.27
TMEM260-208ENST00000555905 CHAF1AQ13111 956 aaPredicted RBP13.36□□□□□ -0.27
TMEM260-208ENST00000555905 AOC3Q16853 763 aa13.36□□□□□ -0.27
TMEM260-208ENST00000555905 DOK7Q18PE1 504 aa13.36□□□□□ -0.27
TMEM260-208ENST00000555905 KBTBD3Q8NAB2 608 aa13.36□□□□□ -0.27
TMEM260-208ENST00000555905 EDC3Q96F86 508 aaKnown RBP13.36□□□□□ -0.27
TMEM260-208ENST00000555905 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.36□□□□□ -0.27
TMEM260-208ENST00000555905 CLEC11AQ9Y240 323 aa13.36□□□□□ -0.27
TMEM260-208ENST00000555905 MYH7P12883 1935 aa13.35□□□□□ -0.27
TMEM260-208ENST00000555905 RFX7Q2KHR2 1363 aa13.35□□□□□ -0.27
TMEM260-208ENST00000555905 EIF5BO60841 1220 aaKnown RBP13.35□□□□□ -0.27
TMEM260-208ENST00000555905 TBC1D9Q6ZT07 1266 aa13.35□□□□□ -0.27
TMEM260-208ENST00000555905 PODNQ7Z5L7 613 aa13.35□□□□□ -0.27
TMEM260-208ENST00000555905 LARGE2Q8N3Y3 721 aa13.35□□□□□ -0.27
TMEM260-208ENST00000555905 ZGPATQ8N5A5 531 aaKnown RBP13.35□□□□□ -0.27
TMEM260-208ENST00000555905 WDR66Q8TBY9 1149 aa13.35□□□□□ -0.27
TMEM260-208ENST00000555905 ANTXR1Q9H6X2 564 aa13.35□□□□□ -0.27
TMEM260-208ENST00000555905 ZNF277Q9NRM2 450 aaPredicted RBP13.35□□□□□ -0.27
TMEM260-208ENST00000555905 DIAPH3Q9NSV4 1193 aa13.35□□□□□ -0.27
TMEM260-208ENST00000555905 COL1A1P02452 1464 aaPredicted RBP13.35□□□□□ -0.27
TMEM260-208ENST00000555905 ECE2O60344 883 aa13.34□□□□□ -0.27
TMEM260-208ENST00000555905 IDH1O75874 414 aaKnown RBP13.34□□□□□ -0.27
TMEM260-208ENST00000555905 IARSP41252 1262 aaKnown RBP13.34□□□□□ -0.27
TMEM260-208ENST00000555905 C8orf34Q49A92 452 aa13.34□□□□□ -0.27
TMEM260-208ENST00000555905 SPTY2D1Q68D10 685 aaPredicted RBP13.34□□□□□ -0.27
TMEM260-208ENST00000555905 ZSCAN25Q6NSZ9 544 aa13.34□□□□□ -0.27
TMEM260-208ENST00000555905 DBNDD1Q9H9R9 158 aa13.34□□□□□ -0.27
TMEM260-208ENST00000555905 PIH1D3Q9NQM4 214 aaKnown RBP13.34□□□□□ -0.27
TMEM260-208ENST00000555905 LRP2BPQ9P2M1 347 aa13.34□□□□□ -0.27
TMEM260-208ENST00000555905 CHD4Q14839 1912 aa13.34□□□□□ -0.27
TMEM260-208ENST00000555905 LTBP3Q9NS15 1303 aa13.34□□□□□ -0.27
TMEM260-208ENST00000555905 DOCK2Q92608 1830 aa13.34□□□□□ -0.27
TMEM260-208ENST00000555905 NFKBIEO00221 500 aa13.33□□□□□ -0.28
TMEM260-208ENST00000555905 ZFYP08048 801 aaPredicted RBP13.33□□□□□ -0.28
TMEM260-208ENST00000555905 CHMLP26374 656 aa13.33□□□□□ -0.28
TMEM260-208ENST00000555905 MAP3K12Q12852 859 aa13.33□□□□□ -0.28
TMEM260-208ENST00000555905 ARHGAP27Q6ZUM4 889 aa13.33□□□□□ -0.28
TMEM260-208ENST00000555905 NIM1KQ8IY84 436 aa13.33□□□□□ -0.28
TMEM260-208ENST00000555905 TBC1D22AQ8WUA7 517 aa13.33□□□□□ -0.28
TMEM260-208ENST00000555905 RUFY2Q8WXA3 655 aa13.33□□□□□ -0.28
TMEM260-208ENST00000555905 FBXW7Q969H0 707 aa13.33□□□□□ -0.28
TMEM260-208ENST00000555905 ABCF2Q9UG63 623 aa13.33□□□□□ -0.28
TMEM260-208ENST00000555905 MYO5AQ9Y4I1 1855 aaKnown RBP13.33□□□□□ -0.28
TMEM260-208ENST00000555905 FAM205AQ6ZU69 1335 aa13.33□□□□□ -0.28
TMEM260-208ENST00000555905 SALL1Q9NSC2 1324 aa13.33□□□□□ -0.28
TMEM260-208ENST00000555905 CCDC88AQ3V6T2 1871 aa13.32□□□□□ -0.28
TMEM260-208ENST00000555905 RNF113AO15541 343 aaKnown RBP13.32□□□□□ -0.28
TMEM260-208ENST00000555905 GTF2IP78347 998 aa13.32□□□□□ -0.28
TMEM260-208ENST00000555905 TTLL5Q6EMB2 1281 aa13.32□□□□□ -0.28
TMEM260-208ENST00000555905 ERICH6Q7L0X2 663 aa13.32□□□□□ -0.28
TMEM260-208ENST00000555905 JDP2Q8WYK2 163 aa13.32□□□□□ -0.28
TMEM260-208ENST00000555905 RAI14Q9P0K7 980 aa13.32□□□□□ -0.28
TMEM260-208ENST00000555905 JAG2Q9Y219 1238 aa13.32□□□□□ -0.28
TMEM260-208ENST00000555905 IGSF3O75054 1194 aa13.31□□□□□ -0.28
TMEM260-208ENST00000555905 SLC9C2Q5TAH2 1124 aa13.31□□□□□ -0.28
TMEM260-208ENST00000555905 POTEHQ6S545 545 aa13.31□□□□□ -0.28
TMEM260-208ENST00000555905 CWC27Q6UX04 472 aaKnown RBP13.31□□□□□ -0.28
TMEM260-208ENST00000555905 BACH2Q9BYV9 841 aa13.31□□□□□ -0.28
TMEM260-208ENST00000555905 MAST2Q6P0Q8 1798 aa13.3□□□□□ -0.28
TMEM260-208ENST00000555905 USP17L3A6NCW0 530 aa13.3□□□□□ -0.28
TMEM260-208ENST00000555905 USP17L4A6NCW7 530 aa13.3□□□□□ -0.28
TMEM260-208ENST00000555905 LDHBP07195 334 aaKnown RBP13.3□□□□□ -0.28
TMEM260-208ENST00000555905 PDE6AP16499 860 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms