RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 RLBP1P12271 317 aa8.57□□□□□ -1.04
SLIRP-204ENST00000555890 C1orf141Q5JVX7 400 aa8.57□□□□□ -1.04
SLIRP-204ENST00000555890 ZNF530Q6P9A1 599 aaPredicted RBP8.57□□□□□ -1.04
SLIRP-204ENST00000555890 ITPRIPQ8IWB1 547 aa8.57□□□□□ -1.04
SLIRP-204ENST00000555890 TSPYL6Q8N831 410 aa8.57□□□□□ -1.04
SLIRP-204ENST00000555890 SMARCC1Q92922 1105 aaPredicted RBP8.57□□□□□ -1.04
SLIRP-204ENST00000555890 CALR3Q96L12 384 aaKnown RBP8.57□□□□□ -1.04
SLIRP-204ENST00000555890 SLC4A9Q96Q91 983 aa8.57□□□□□ -1.04
SLIRP-204ENST00000555890 RWDD1Q9H446 243 aaPredicted RBP8.57□□□□□ -1.04
SLIRP-204ENST00000555890 ZSWIM6Q9HCJ5 1215 aa8.57□□□□□ -1.04
SLIRP-204ENST00000555890 PRUNE2Q8WUY3 3088 aa8.57□□□□□ -1.04
SLIRP-204ENST00000555890 ZDBF2Q9HCK1 2354 aa8.56□□□□□ -1.04
SLIRP-204ENST00000555890 KIAA0100Q14667 2235 aaKnown RBP8.56□□□□□ -1.04
SLIRP-204ENST00000555890 MYH14Q7Z406 1995 aaKnown RBP8.56□□□□□ -1.04
SLIRP-204ENST00000555890 TATP17735 454 aaPredicted RBP8.56□□□□□ -1.04
SLIRP-204ENST00000555890 FOSBP53539 338 aa8.56□□□□□ -1.04
SLIRP-204ENST00000555890 IL17REQ8NFR9 667 aa8.56□□□□□ -1.04
SLIRP-204ENST00000555890 SPIRE2Q8WWL2 714 aa8.56□□□□□ -1.04
SLIRP-204ENST00000555890 RAPGEF4Q8WZA2 1011 aa8.56□□□□□ -1.04
SLIRP-204ENST00000555890 PLA2G2EQ9NZK7 142 aa8.56□□□□□ -1.04
SLIRP-204ENST00000555890 ASAP1Q9ULH1 1129 aa8.56□□□□□ -1.04
SLIRP-204ENST00000555890 TNNQ9UQP3 1299 aa8.56□□□□□ -1.04
SLIRP-204ENST00000555890 IRS2Q9Y4H2 1338 aa8.55□□□□□ -1.04
SLIRP-204ENST00000555890 MAST4O15021 2626 aa8.55□□□□□ -1.04
SLIRP-204ENST00000555890 KMT2BQ9UMN6 2715 aaPredicted RBP8.55□□□□□ -1.04
SLIRP-204ENST00000555890 SPTLC1O15269 473 aa8.55□□□□□ -1.04
SLIRP-204ENST00000555890 DDR1Q08345 913 aa8.55□□□□□ -1.04
SLIRP-204ENST00000555890 TEFQ10587 303 aa8.55□□□□□ -1.04
SLIRP-204ENST00000555890 TMEM57Q8N5G2 664 aa8.55□□□□□ -1.04
SLIRP-204ENST00000555890 STK31Q9BXU1 1019 aa8.55□□□□□ -1.04
SLIRP-204ENST00000555890 MIS18AQ9NYP9 233 aa8.55□□□□□ -1.04
SLIRP-204ENST00000555890 SPG7Q9UQ90 795 aa8.55□□□□□ -1.04
SLIRP-204ENST00000555890 RBM19Q9Y4C8 960 aaKnown RBP8.55□□□□□ -1.04
SLIRP-204ENST00000555890 ADAMTSL1Q8N6G6 1762 aa8.55□□□□□ -1.04
SLIRP-204ENST00000555890 CEMIPQ8WUJ3 1361 aa8.54□□□□□ -1.04
SLIRP-204ENST00000555890 ZBTB7BO15156 539 aaPredicted RBP8.54□□□□□ -1.04
SLIRP-204ENST00000555890 GJA5P36382 358 aa8.54□□□□□ -1.04
SLIRP-204ENST00000555890 ABL2P42684 1182 aa8.54□□□□□ -1.04
SLIRP-204ENST00000555890 TRAPPC3LQ5T215 181 aa8.54□□□□□ -1.04
SLIRP-204ENST00000555890 TMCO4Q5TGY1 634 aa8.54□□□□□ -1.04
SLIRP-204ENST00000555890 CCDC30Q5VVM6 783 aa8.54□□□□□ -1.04
SLIRP-204ENST00000555890 FAM109BQ6ICB4 259 aaPredicted RBP8.54□□□□□ -1.04
SLIRP-204ENST00000555890 BICDL1Q6ZP65 573 aa8.54□□□□□ -1.04
SLIRP-204ENST00000555890 ZDHHC16Q969W1 377 aa8.54□□□□□ -1.04
SLIRP-204ENST00000555890 STAP2Q9UGK3 403 aa8.54□□□□□ -1.04
SLIRP-204ENST00000555890 SCN4AP35499 1836 aa8.54□□□□□ -1.04
SLIRP-204ENST00000555890 PTPRCP08575 1304 aa8.54□□□□□ -1.04
SLIRP-204ENST00000555890 CHD6Q8TD26 2715 aa8.53□□□□□ -1.04
SLIRP-204ENST00000555890 KDM3BQ7LBC6 1761 aa8.53□□□□□ -1.04
SLIRP-204ENST00000555890 PAPPA2Q9BXP8 1791 aa8.53□□□□□ -1.04
SLIRP-204ENST00000555890 IGHDP01880 384 aa8.53□□□□□ -1.04
SLIRP-204ENST00000555890 PRSS12P56730 875 aa8.53□□□□□ -1.04
SLIRP-204ENST00000555890 IRF5Q13568 498 aa8.53□□□□□ -1.04
SLIRP-204ENST00000555890 TMEM31Q5JXX7 168 aa8.53□□□□□ -1.04
SLIRP-204ENST00000555890 NUTM1Q86Y26 1132 aa8.53□□□□□ -1.04
SLIRP-204ENST00000555890 ARMC5Q96C12 935 aa8.53□□□□□ -1.04
SLIRP-204ENST00000555890 CSRNP1Q96S65 589 aa8.53□□□□□ -1.04
SLIRP-204ENST00000555890 ATG3Q9NT62 314 aa8.53□□□□□ -1.04
SLIRP-204ENST00000555890 PCDHB15Q9Y5E8 787 aa8.53□□□□□ -1.04
SLIRP-204ENST00000555890 ABCC4O15439 1325 aa8.53□□□□□ -1.04
SLIRP-204ENST00000555890 FAM155AB1AL88 458 aaPredicted RBP8.52□□□□□ -1.05
SLIRP-204ENST00000555890 PATL2C9JE40 543 aaKnown RBP8.52□□□□□ -1.05
SLIRP-204ENST00000555890 RNMTO43148 476 aaKnown RBP8.52□□□□□ -1.05
SLIRP-204ENST00000555890 CD46P15529 392 aa8.52□□□□□ -1.05
SLIRP-204ENST00000555890 ITGB8P26012 769 aa8.52□□□□□ -1.05
SLIRP-204ENST00000555890 TM4SF1P30408 202 aa8.52□□□□□ -1.05
SLIRP-204ENST00000555890 ATP6V1AP38606 617 aa8.52□□□□□ -1.05
SLIRP-204ENST00000555890 HDAC1Q13547 482 aaPredicted RBP8.52□□□□□ -1.05
SLIRP-204ENST00000555890 KRT24Q2M2I5 525 aa8.52□□□□□ -1.05
SLIRP-204ENST00000555890 NOM1Q5C9Z4 860 aaKnown RBP8.52□□□□□ -1.05
SLIRP-204ENST00000555890 RC3H1Q5TC82 1133 aaKnown RBP8.52□□□□□ -1.05
SLIRP-204ENST00000555890 RSBN1LQ6PCB5 846 aaPredicted RBP8.52□□□□□ -1.05
SLIRP-204ENST00000555890 ERMP1Q7Z2K6 904 aa8.52□□□□□ -1.05
SLIRP-204ENST00000555890 SULF1Q8IWU6 871 aa8.52□□□□□ -1.05
SLIRP-204ENST00000555890 GLMNQ92990 594 aa8.52□□□□□ -1.05
SLIRP-204ENST00000555890 LGR6Q9HBX8 967 aa8.52□□□□□ -1.05
SLIRP-204ENST00000555890 SCN11AQ9UI33 1791 aa8.52□□□□□ -1.05
SLIRP-204ENST00000555890 PCDH11XQ9BZA7 1347 aa8.52□□□□□ -1.05
SLIRP-204ENST00000555890 PCDH11YQ9BZA8 1340 aa8.52□□□□□ -1.05
SLIRP-204ENST00000555890 SIPA1L3O60292 1781 aaPredicted RBP8.51□□□□□ -1.05
SLIRP-204ENST00000555890 DICER1Q9UPY3 1922 aaKnown RBP8.51□□□□□ -1.05
SLIRP-204ENST00000555890 BTBD11A6QL63 1104 aa8.51□□□□□ -1.05
SLIRP-204ENST00000555890 HSP90AB1P08238 724 aaKnown RBP8.51□□□□□ -1.05
SLIRP-204ENST00000555890 HOXB7P09629 217 aa8.51□□□□□ -1.05
SLIRP-204ENST00000555890 HUNKP57058 714 aa8.51□□□□□ -1.05
SLIRP-204ENST00000555890 NHLH1Q02575 133 aa8.51□□□□□ -1.05
SLIRP-204ENST00000555890 IFNL2Q8IZJ0 200 aa8.51□□□□□ -1.05
SLIRP-204ENST00000555890 TTLL6Q8N841 843 aa8.51□□□□□ -1.05
SLIRP-204ENST00000555890 UHRF1Q96T88 793 aaPredicted RBP8.51□□□□□ -1.05
SLIRP-204ENST00000555890 HTATIP2Q9BUP3 242 aa8.51□□□□□ -1.05
SLIRP-204ENST00000555890 GZF1Q9H116 711 aaPredicted RBP8.51□□□□□ -1.05
SLIRP-204ENST00000555890 ZBTB40Q9NUA8 1239 aa8.51□□□□□ -1.05
SLIRP-204ENST00000555890 RTCBQ9Y3I0 505 aaKnown RBP8.51□□□□□ -1.05
SLIRP-204ENST00000555890 GPR25O00155 361 aa8.5□□□□□ -1.05
SLIRP-204ENST00000555890 POLRMTO00411 1230 aaKnown RBP8.5□□□□□ -1.05
SLIRP-204ENST00000555890 LILRB3O75022 631 aa8.5□□□□□ -1.05
SLIRP-204ENST00000555890 RPS6KA4O75676 772 aa8.5□□□□□ -1.05
SLIRP-204ENST00000555890 BMP8BP34820 402 aa8.5□□□□□ -1.05
SLIRP-204ENST00000555890 BCAMP50895 628 aa8.5□□□□□ -1.05
SLIRP-204ENST00000555890 RGMBQ6NW40 437 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms