RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 USP17L4A6NCW7 530 aa15.17■□□□□ 0.02
SHMT2-221ENST00000555773 FZD9O00144 591 aa15.17■□□□□ 0.02
SHMT2-221ENST00000555773 RGS3P49796 1198 aa15.17■□□□□ 0.02
SHMT2-221ENST00000555773 FKBP1AP62942 108 aaKnown RBP15.17■□□□□ 0.02
SHMT2-221ENST00000555773 GTF2IP78347 998 aa15.17■□□□□ 0.02
SHMT2-221ENST00000555773 SCARF1Q14162 830 aa15.17■□□□□ 0.02
SHMT2-221ENST00000555773 TTF1Q15361 905 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-221ENST00000555773 TSHZ3Q63HK5 1081 aa15.17■□□□□ 0.02
SHMT2-221ENST00000555773 USP17L1Q7RTZ2 530 aa15.17■□□□□ 0.02
SHMT2-221ENST00000555773 ZGPATQ8N5A5 531 aaKnown RBP15.17■□□□□ 0.02
SHMT2-221ENST00000555773 IQSEC3Q9UPP2 1182 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-221ENST00000555773 YDJCA8MPS7 323 aa15.16■□□□□ 0.02
SHMT2-221ENST00000555773 ZAP70P43403 619 aa15.16■□□□□ 0.02
SHMT2-221ENST00000555773 EIF6P56537 245 aaKnown RBP15.16■□□□□ 0.02
SHMT2-221ENST00000555773 TNIP1Q15025 636 aa15.16■□□□□ 0.02
SHMT2-221ENST00000555773 TTC22Q5TAA0 569 aa15.16■□□□□ 0.02
SHMT2-221ENST00000555773 C9orf131Q5VYM1 1079 aa15.16■□□□□ 0.02
SHMT2-221ENST00000555773 TICAM2Q86XR7 235 aa15.16■□□□□ 0.02
SHMT2-221ENST00000555773 SNRKQ9NRH2 765 aa15.16■□□□□ 0.02
SHMT2-221ENST00000555773 RNF181Q9P0P0 153 aa15.16■□□□□ 0.02
SHMT2-221ENST00000555773 SUGT1Q9Y2Z0 365 aa15.16■□□□□ 0.02
SHMT2-221ENST00000555773 SALL1Q9NSC2 1324 aa15.16■□□□□ 0.02
SHMT2-221ENST00000555773 FER1L6Q2WGJ9 1857 aa15.15■□□□□ 0.02
SHMT2-221ENST00000555773 VIL1P09327 827 aaKnown RBP15.15■□□□□ 0.02
SHMT2-221ENST00000555773 CHAF1AQ13111 956 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-221ENST00000555773 SPTY2D1Q68D10 685 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-221ENST00000555773 CIAPIN1Q6FI81 312 aa15.15■□□□□ 0.02
SHMT2-221ENST00000555773 EVI5LQ96CN4 794 aa15.15■□□□□ 0.02
SHMT2-221ENST00000555773 DNAJC2Q99543 621 aaKnown RBP15.15■□□□□ 0.02
SHMT2-221ENST00000555773 KCNQ5Q9NR82 932 aa15.15■□□□□ 0.02
SHMT2-221ENST00000555773 PAG1Q9NWQ8 432 aa15.15■□□□□ 0.02
SHMT2-221ENST00000555773 ZC3H4Q9UPT8 1303 aaKnown RBP15.15■□□□□ 0.02
SHMT2-221ENST00000555773 CACNA1SQ13698 1873 aa15.14■□□□□ 0.01
SHMT2-221ENST00000555773 CYP2E1P05181 493 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-221ENST00000555773 CXCL9Q07325 125 aa15.14■□□□□ 0.01
SHMT2-221ENST00000555773 BMP2KLQ5H9B9 411 aa15.14■□□□□ 0.01
SHMT2-221ENST00000555773 DACT2Q5SW24 774 aa15.14■□□□□ 0.01
SHMT2-221ENST00000555773 TMED8Q6PL24 325 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-221ENST00000555773 PI16Q6UXB8 463 aa15.14■□□□□ 0.01
SHMT2-221ENST00000555773 SKAP1Q86WV1 359 aa15.14■□□□□ 0.01
SHMT2-221ENST00000555773 CNTROBQ8N137 903 aa15.14■□□□□ 0.01
SHMT2-221ENST00000555773 GOLIM4O00461 696 aa15.13■□□□□ 0.01
SHMT2-221ENST00000555773 RAD17O75943 681 aa15.13■□□□□ 0.01
SHMT2-221ENST00000555773 MMP14P50281 582 aa15.13■□□□□ 0.01
SHMT2-221ENST00000555773 LRRFIP1Q32MZ4 808 aaKnown RBP15.13■□□□□ 0.01
SHMT2-221ENST00000555773 MFSD14BQ5SR56 506 aa15.13■□□□□ 0.01
SHMT2-221ENST00000555773 MYO3BQ8WXR4 1341 aa15.13■□□□□ 0.01
SHMT2-221ENST00000555773 A0A1B0GUL6 1792 aa15.12■□□□□ 0.01
SHMT2-221ENST00000555773 TRIM6-TRIM34B2RNG4 842 aa15.12■□□□□ 0.01
SHMT2-221ENST00000555773 PSMD14O00487 310 aa15.12■□□□□ 0.01
SHMT2-221ENST00000555773 MAP3K12Q12852 859 aa15.12■□□□□ 0.01
SHMT2-221ENST00000555773 RSBN1LQ6PCB5 846 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-221ENST00000555773 ERICH6Q7L0X2 663 aa15.12■□□□□ 0.01
SHMT2-221ENST00000555773 KBTBD3Q8NAB2 608 aa15.12■□□□□ 0.01
SHMT2-221ENST00000555773 AGBL3Q8NEM8 1001 aa15.12■□□□□ 0.01
SHMT2-221ENST00000555773 FBXW7Q969H0 707 aa15.12■□□□□ 0.01
SHMT2-221ENST00000555773 MRIQ9BWK5 157 aa15.12■□□□□ 0.01
SHMT2-221ENST00000555773 ANTXR1Q9H6X2 564 aa15.12■□□□□ 0.01
SHMT2-221ENST00000555773 LRP2BPQ9P2M1 347 aa15.12■□□□□ 0.01
SHMT2-221ENST00000555773 ABCF2Q9UG63 623 aa15.12■□□□□ 0.01
SHMT2-221ENST00000555773 LDHBP07195 334 aaKnown RBP15.11■□□□□ 0.01
SHMT2-221ENST00000555773 GSPT1P15170 499 aaKnown RBP15.11■□□□□ 0.01
SHMT2-221ENST00000555773 SDSP20132 328 aa15.11■□□□□ 0.01
SHMT2-221ENST00000555773 RPS12P25398 132 aaKnown RBP15.11■□□□□ 0.01
SHMT2-221ENST00000555773 ZSCAN25Q6NSZ9 544 aa15.11■□□□□ 0.01
SHMT2-221ENST00000555773 DPY19L2Q6NUT2 758 aa15.11■□□□□ 0.01
SHMT2-221ENST00000555773 TBC1D9Q6ZT07 1266 aa15.11■□□□□ 0.01
SHMT2-221ENST00000555773 GPC2Q8N158 579 aa15.11■□□□□ 0.01
SHMT2-221ENST00000555773 RILPL2Q969X0 211 aa15.11■□□□□ 0.01
SHMT2-221ENST00000555773 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.11■□□□□ 0.011e-6■■□□□ 11.9
SHMT2-221ENST00000555773 PIH1D3Q9NQM4 214 aaKnown RBP15.11■□□□□ 0.01
SHMT2-221ENST00000555773 JAG2Q9Y219 1238 aa15.11■□□□□ 0.01
SHMT2-221ENST00000555773 NDUFB9Q9Y6M9 179 aa15.11■□□□□ 0.01
SHMT2-221ENST00000555773 ARAP2Q8WZ64 1704 aa15.1■□□□□ 0.01
SHMT2-221ENST00000555773 MAP4K4O95819 1239 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-221ENST00000555773 ZFYP08048 801 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-221ENST00000555773 DPF2Q92785 391 aa15.1■□□□□ 0.01
SHMT2-221ENST00000555773 EDC3Q96F86 508 aaKnown RBP15.1■□□□□ 0.01
SHMT2-221ENST00000555773 GMLQ99445 158 aa15.1■□□□□ 0.01
SHMT2-221ENST00000555773 RAI14Q9P0K7 980 aa15.1■□□□□ 0.01
SHMT2-221ENST00000555773 COL1A1P02452 1464 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-221ENST00000555773 HIP1O00291 1037 aa15.09■□□□□ 0.01
SHMT2-221ENST00000555773 IDH1O75874 414 aaKnown RBP15.09■□□□□ 0.01
SHMT2-221ENST00000555773 GSTO1P78417 241 aa15.09■□□□□ 0.01
SHMT2-221ENST00000555773 HDLBPQ00341 1268 aaKnown RBP15.09■□□□□ 0.01
SHMT2-221ENST00000555773 SLF2Q8IX21 1173 aa15.09■□□□□ 0.01
SHMT2-221ENST00000555773 CERS5Q8N5B7 392 aa15.09■□□□□ 0.01
SHMT2-221ENST00000555773 FSD1Q9BTV5 496 aa15.09■□□□□ 0.01
SHMT2-221ENST00000555773 MAST3O60307 1309 aa15.09■□□□□ 0.01
SHMT2-221ENST00000555773 UTRNP46939 3433 aa15.09■□□□□ 0.01
SHMT2-221ENST00000555773 COL4A5P29400 1685 aa15.09■□□□□ 0.01
SHMT2-221ENST00000555773 LDHCP07864 332 aa15.08■□□□□ 0
SHMT2-221ENST00000555773 PRDX5P30044 214 aa15.08■□□□□ 0
SHMT2-221ENST00000555773 UBE3CQ15386 1083 aa15.08■□□□□ 0
SHMT2-221ENST00000555773 SLC9C2Q5TAH2 1124 aa15.08■□□□□ 0
SHMT2-221ENST00000555773 OGFOD1Q8N543 542 aa15.08■□□□□ 0
SHMT2-221ENST00000555773 NSUN4Q96CB9 384 aaKnown RBP15.08■□□□□ 0
SHMT2-221ENST00000555773 FAM163AQ96GL9 167 aaPredicted RBP15.08■□□□□ 0
SHMT2-221ENST00000555773 MXD3Q9BW11 206 aa15.08■□□□□ 0
SHMT2-221ENST00000555773 GJA3Q9Y6H8 435 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms