RNA–Protein interactions for RNA: ENST00000555548.1

PAX3-210, Transcript of paired box 3, humanhuman

TSL 4

Gene PAX3, Length 458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-210ENST00000555548 CELF2-AS1Q8N7Q2 184 aa9.49□□□□□ -0.89
PAX3-210ENST00000555548 FAM169BQ8N8A8 192 aa9.49□□□□□ -0.89
PAX3-210ENST00000555548 CEP120Q8N960 986 aa9.49□□□□□ -0.89
PAX3-210ENST00000555548 TRPM4Q8TD43 1214 aa9.49□□□□□ -0.89
PAX3-210ENST00000555548 DNAJC7Q99615 494 aa9.49□□□□□ -0.89
PAX3-210ENST00000555548 SLKQ9H2G2 1235 aaPredicted RBP9.49□□□□□ -0.89
PAX3-210ENST00000555548 SEC31BQ9NQW1 1179 aa9.49□□□□□ -0.89
PAX3-210ENST00000555548 CCDC85CA6NKD9 419 aa9.48□□□□□ -0.89
PAX3-210ENST00000555548 MAP3K6O95382 1288 aa9.48□□□□□ -0.89
PAX3-210ENST00000555548 ACPPP15309 386 aa9.48□□□□□ -0.89
PAX3-210ENST00000555548 DDR2Q16832 855 aa9.48□□□□□ -0.89
PAX3-210ENST00000555548 EFHC2Q5JST6 749 aa9.48□□□□□ -0.89
PAX3-210ENST00000555548 MRPL14Q6P1L8 145 aaKnown RBP9.48□□□□□ -0.89
PAX3-210ENST00000555548 KANSL2Q9H9L4 492 aa9.48□□□□□ -0.89
PAX3-210ENST00000555548 FANCLQ9NW38 375 aa9.48□□□□□ -0.89
PAX3-210ENST00000555548 PAGE1O75459 146 aa9.47□□□□□ -0.89
PAX3-210ENST00000555548 F13A1P00488 732 aa9.47□□□□□ -0.89
PAX3-210ENST00000555548 LBRQ14739 615 aaKnown RBP9.47□□□□□ -0.89
PAX3-210ENST00000555548 POTEGQ6S5H5 508 aa9.47□□□□□ -0.89
PAX3-210ENST00000555548 BNC2Q6ZN30 1099 aaPredicted RBP9.47□□□□□ -0.89
PAX3-210ENST00000555548 OR6P1Q8NGX9 317 aa9.47□□□□□ -0.89
PAX3-210ENST00000555548 APPBP2Q92624 585 aa9.47□□□□□ -0.89
PAX3-210ENST00000555548 EFCC1Q9HA90 598 aa9.47□□□□□ -0.89
PAX3-210ENST00000555548 A0A096LPE4 126 aa9.46□□□□□ -0.9
PAX3-210ENST00000555548 A0A1W2PPZ6 126 aa9.46□□□□□ -0.9
PAX3-210ENST00000555548 ATXN7O15265 892 aaPredicted RBP9.46□□□□□ -0.9
PAX3-210ENST00000555548 TLR3O15455 904 aaKnown RBP9.46□□□□□ -0.9
PAX3-210ENST00000555548 NFKB1P19838 968 aa9.46□□□□□ -0.9
PAX3-210ENST00000555548 PLAURQ03405 335 aa9.46□□□□□ -0.9
PAX3-210ENST00000555548 LAMC2Q13753 1193 aa9.46□□□□□ -0.9
PAX3-210ENST00000555548 RASGRF1Q13972 1273 aa9.46□□□□□ -0.9
PAX3-210ENST00000555548 ARSHQ5FYA8 562 aa9.46□□□□□ -0.9
PAX3-210ENST00000555548 FIGNL1Q6PIW4 674 aa9.46□□□□□ -0.9
PAX3-210ENST00000555548 KIAA0907Q7Z7F0 614 aaPredicted RBP9.46□□□□□ -0.9
PAX3-210ENST00000555548 HOMER1Q86YM7 354 aa9.46□□□□□ -0.9
PAX3-210ENST00000555548 TMEM102Q8N9M5 508 aaPredicted RBP9.46□□□□□ -0.9
PAX3-210ENST00000555548 FBXO27Q8NI29 283 aa9.46□□□□□ -0.9
PAX3-210ENST00000555548 GATAD2BQ8WXI9 593 aa9.46□□□□□ -0.9
PAX3-210ENST00000555548 NXPE3Q969Y0 559 aa9.46□□□□□ -0.9
PAX3-210ENST00000555548 ZNF576Q9H609 170 aa9.46□□□□□ -0.9
PAX3-210ENST00000555548 ACTR10Q9NZ32 417 aa9.46□□□□□ -0.9
PAX3-210ENST00000555548 SOS2Q07890 1332 aaPredicted RBP9.46□□□□□ -0.9
PAX3-210ENST00000555548 FAM221AA4D161 298 aa9.45□□□□□ -0.9
PAX3-210ENST00000555548 METTL12A8MUP2 240 aa9.45□□□□□ -0.9
PAX3-210ENST00000555548 NFKBIEO00221 500 aa9.45□□□□□ -0.9
PAX3-210ENST00000555548 TRPA1O75762 1119 aa9.45□□□□□ -0.9
PAX3-210ENST00000555548 ZNF165P49910 485 aa9.45□□□□□ -0.9
PAX3-210ENST00000555548 PRR20EP86478 221 aa9.45□□□□□ -0.9
PAX3-210ENST00000555548 PRR20CP86479 221 aa9.45□□□□□ -0.9
PAX3-210ENST00000555548 PRR20DP86480 221 aa9.45□□□□□ -0.9
PAX3-210ENST00000555548 PRR20BP86481 221 aa9.45□□□□□ -0.9
PAX3-210ENST00000555548 PRR20AP86496 221 aa9.45□□□□□ -0.9
PAX3-210ENST00000555548 FAAP100Q0VG06 881 aa9.45□□□□□ -0.9
PAX3-210ENST00000555548 IFRD2Q12894 506 aaPredicted RBP9.45□□□□□ -0.9
PAX3-210ENST00000555548 REXO1Q8N1G1 1221 aaKnown RBP9.45□□□□□ -0.9
PAX3-210ENST00000555548 PNMA5Q96PV4 448 aa9.45□□□□□ -0.9
PAX3-210ENST00000555548 CRBNQ96SW2 442 aa9.45□□□□□ -0.9
PAX3-210ENST00000555548 KLHL42Q9P2K6 505 aa9.45□□□□□ -0.9
PAX3-210ENST00000555548 PCDHGC4Q9Y5F7 938 aa9.45□□□□□ -0.9
PAX3-210ENST00000555548 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.45□□□□□ -0.9
PAX3-210ENST00000555548 CC2D2AQ9P2K1 1620 aa9.45□□□□□ -0.9
PAX3-210ENST00000555548 ESYT3A0FGR9 886 aa9.44□□□□□ -0.9
PAX3-210ENST00000555548 FIGNL2A6NMB9 653 aa9.44□□□□□ -0.9
PAX3-210ENST00000555548 PDPK1O15530 556 aa9.44□□□□□ -0.9
PAX3-210ENST00000555548 MPP2Q14168 576 aa9.44□□□□□ -0.9
PAX3-210ENST00000555548 CWF19L2Q2TBE0 894 aaKnown RBP9.44□□□□□ -0.9
PAX3-210ENST00000555548 RPUSD2Q8IZ73 545 aaKnown RBP9.44□□□□□ -0.9
PAX3-210ENST00000555548 PLD4Q96BZ4 506 aa9.44□□□□□ -0.9
PAX3-210ENST00000555548 HHIPQ96QV1 700 aa9.44□□□□□ -0.9
PAX3-210ENST00000555548 FERD3LQ96RJ6 166 aa9.44□□□□□ -0.9
PAX3-210ENST00000555548 GAS2L1Q99501 681 aaPredicted RBP9.44□□□□□ -0.9
PAX3-210ENST00000555548 MIR1-1HGQ9H1L0 117 aa9.44□□□□□ -0.9
PAX3-210ENST00000555548 TMEM260Q9NX78 707 aa9.44□□□□□ -0.9
PAX3-210ENST00000555548 CILPO75339 1184 aa9.43□□□□□ -0.9
PAX3-210ENST00000555548 IMPDH2P12268 514 aa9.43□□□□□ -0.9
PAX3-210ENST00000555548 TNP2Q05952 138 aa9.43□□□□□ -0.9
PAX3-210ENST00000555548 TRIM67Q6ZTA4 783 aa9.43□□□□□ -0.9
PAX3-210ENST00000555548 ST7Q9NRC1 585 aa9.43□□□□□ -0.9
PAX3-210ENST00000555548 TMEM39AQ9NV64 488 aa9.43□□□□□ -0.9
PAX3-210ENST00000555548 GPN3Q9UHW5 284 aaPredicted RBP9.43□□□□□ -0.9
PAX3-210ENST00000555548 ZNRF3Q9ULT6 936 aa9.43□□□□□ -0.9
PAX3-210ENST00000555548 MAPK8IP1Q9UQF2 711 aa9.43□□□□□ -0.9
PAX3-210ENST00000555548 PCDHB5Q9Y5E4 795 aa9.43□□□□□ -0.9
PAX3-210ENST00000555548 PDE2AO00408 941 aaPredicted RBP9.42□□□□□ -0.9
PAX3-210ENST00000555548 KHNYNO15037 678 aaKnown RBP9.42□□□□□ -0.9
PAX3-210ENST00000555548 LMNB1P20700 586 aa9.42□□□□□ -0.9
PAX3-210ENST00000555548 MCM4P33991 863 aa9.42□□□□□ -0.9
PAX3-210ENST00000555548 GYS2P54840 703 aa9.42□□□□□ -0.9
PAX3-210ENST00000555548 NRLP54845 237 aa9.42□□□□□ -0.9
PAX3-210ENST00000555548 RBBP8NLQ8NC74 664 aaPredicted RBP9.42□□□□□ -0.9
PAX3-210ENST00000555548 STRN4Q9NRL3 753 aa9.42□□□□□ -0.9
PAX3-210ENST00000555548 SAMM50Q9Y512 469 aa9.42□□□□□ -0.9
PAX3-210ENST00000555548 THBS1P07996 1170 aa9.41□□□□□ -0.9
PAX3-210ENST00000555548 CASP7P55210 303 aa9.41□□□□□ -0.9
PAX3-210ENST00000555548 PPP2R3AQ06190 1150 aa9.41□□□□□ -0.9
PAX3-210ENST00000555548 SPEM2Q0P670 501 aa9.41□□□□□ -0.9
PAX3-210ENST00000555548 SQSTM1Q13501 440 aa9.41□□□□□ -0.9
PAX3-210ENST00000555548 SCARF1Q14162 830 aa9.41□□□□□ -0.9
PAX3-210ENST00000555548 FXNQ16595 210 aa9.41□□□□□ -0.9
PAX3-210ENST00000555548 FBXW10Q5XX13 1052 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms