RNA–Protein interactions for RNA: ENST00000555381.5

ATXN3-232, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-232ENST00000555381 SNRPNP63162 240 aaKnown RBP6.92□□□□□ -1.3
ATXN3-232ENST00000555381 CLN3Q13286 438 aa6.92□□□□□ -1.3
ATXN3-232ENST00000555381 DDX54Q8TDD1 881 aaKnown RBP6.92□□□□□ -1.3
ATXN3-232ENST00000555381 OXCT2Q9BYC2 517 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-232ENST00000555381 ARHGEF10LQ9HCE6 1279 aa6.92□□□□□ -1.3
ATXN3-232ENST00000555381 EVC2Q86UK5 1308 aa6.92□□□□□ -1.3
ATXN3-232ENST00000555381 CPSF1Q10570 1443 aaKnown RBP6.92□□□□□ -1.3
ATXN3-232ENST00000555381 SPATA31C2B4DYI2 1134 aa6.91□□□□□ -1.3
ATXN3-232ENST00000555381 STAU1O95793 577 aaKnown RBP6.91□□□□□ -1.3
ATXN3-232ENST00000555381 MYCP01106 439 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-232ENST00000555381 MAP2K3P46734 347 aa6.91□□□□□ -1.3
ATXN3-232ENST00000555381 TAS1R3Q7RTX0 852 aa6.91□□□□□ -1.3
ATXN3-232ENST00000555381 COL23A1Q86Y22 540 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-232ENST00000555381 TNS2Q63HR2 1409 aa6.91□□□□□ -1.3
ATXN3-232ENST00000555381 SLIT3O75094 1523 aa6.91□□□□□ -1.3
ATXN3-232ENST00000555381 GNRH1P01148 92 aa6.9□□□□□ -1.3
ATXN3-232ENST00000555381 KCNQ4P56696 695 aa6.9□□□□□ -1.3
ATXN3-232ENST00000555381 WDR44Q5JSH3 913 aa6.9□□□□□ -1.3
ATXN3-232ENST00000555381 DEPDC4Q8N2C3 294 aa6.9□□□□□ -1.3
ATXN3-232ENST00000555381 DNAJC5GQ8N7S2 189 aa6.9□□□□□ -1.3
ATXN3-232ENST00000555381 FLAD1Q8NFF5 587 aa6.9□□□□□ -1.3
ATXN3-232ENST00000555381 ANKRD24Q8TF21 1146 aa6.9□□□□□ -1.3
ATXN3-232ENST00000555381 ZNF526Q8TF50 670 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-232ENST00000555381 SYTL4Q96C24 671 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-232ENST00000555381 GPAMQ9HCL2 828 aa6.9□□□□□ -1.3
ATXN3-232ENST00000555381 RAB6BQ9NRW1 208 aa6.9□□□□□ -1.3
ATXN3-232ENST00000555381 HRH3Q9Y5N1 445 aa6.9□□□□□ -1.3
ATXN3-232ENST00000555381 RAB3GAP2Q9H2M9 1393 aa6.9□□□□□ -1.31
ATXN3-232ENST00000555381 LRRC37A3O60309 1634 aa6.9□□□□□ -1.31
ATXN3-232ENST00000555381 USP17L5A8MUK1 530 aa6.89□□□□□ -1.31
ATXN3-232ENST00000555381 ATP9BO43861 1147 aa6.89□□□□□ -1.31
ATXN3-232ENST00000555381 IL2RAP01589 272 aa6.89□□□□□ -1.31
ATXN3-232ENST00000555381 NCOA4Q13772 614 aa6.89□□□□□ -1.31
ATXN3-232ENST00000555381 CALR3Q96L12 384 aaKnown RBP6.89□□□□□ -1.31
ATXN3-232ENST00000555381 RRAGCQ9HB90 399 aa6.89□□□□□ -1.31
ATXN3-232ENST00000555381 CCNL1Q9UK58 526 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-232ENST00000555381 PCDHGA11Q9Y5H2 935 aa6.89□□□□□ -1.31
ATXN3-232ENST00000555381 ITSN1Q15811 1721 aa6.89□□□□□ -1.31
ATXN3-232ENST00000555381 SHISA8B8ZZ34 492 aa6.88□□□□□ -1.31
ATXN3-232ENST00000555381 LZTS3O60299 673 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-232ENST00000555381 TOMM70O94826 608 aa6.88□□□□□ -1.31
ATXN3-232ENST00000555381 COL8A1P27658 744 aa6.88□□□□□ -1.31
ATXN3-232ENST00000555381 PHKA2P46019 1235 aa6.88□□□□□ -1.31
ATXN3-232ENST00000555381 MSL1Q68DK7 614 aa6.88□□□□□ -1.31
ATXN3-232ENST00000555381 PLEKHM2Q8IWE5 1019 aa6.88□□□□□ -1.31
ATXN3-232ENST00000555381 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.88□□□□□ -1.31
ATXN3-232ENST00000555381 ZCRB1Q8TBF4 217 aaKnown RBP6.88□□□□□ -1.31
ATXN3-232ENST00000555381 XAGE2Q96GT9 111 aa6.88□□□□□ -1.31
ATXN3-232ENST00000555381 CFHR5Q9BXR6 569 aa6.88□□□□□ -1.31
ATXN3-232ENST00000555381 ETNK1Q9HBU6 452 aa6.88□□□□□ -1.31
ATXN3-232ENST00000555381 TFIP11Q9UBB9 837 aaKnown RBP6.88□□□□□ -1.31
ATXN3-232ENST00000555381 MKL2Q9ULH7 1088 aa6.88□□□□□ -1.31
ATXN3-232ENST00000555381 CHD4Q14839 1912 aa6.88□□□□□ -1.31
ATXN3-232ENST00000555381 SBF2Q86WG5 1849 aa6.87□□□□□ -1.31
ATXN3-232ENST00000555381 ADCY9O60503 1353 aa6.87□□□□□ -1.31
ATXN3-232ENST00000555381 USP31Q70CQ4 1352 aa6.87□□□□□ -1.31
ATXN3-232ENST00000555381 KTN1Q86UP2 1357 aaKnown RBP6.87□□□□□ -1.31
ATXN3-232ENST00000555381 THBS1P07996 1170 aa6.87□□□□□ -1.31
ATXN3-232ENST00000555381 SCNN1DP51172 638 aa6.87□□□□□ -1.31
ATXN3-232ENST00000555381 EML3Q32P44 896 aa6.87□□□□□ -1.31
ATXN3-232ENST00000555381 IP6K1Q92551 441 aa6.87□□□□□ -1.31
ATXN3-232ENST00000555381 KLRG1Q96E93 195 aa6.87□□□□□ -1.31
ATXN3-232ENST00000555381 ESYT1Q9BSJ8 1104 aa6.87□□□□□ -1.31
ATXN3-232ENST00000555381 PHF24Q9UPV7 400 aa6.87□□□□□ -1.31
ATXN3-232ENST00000555381 SHANK3Q9BYB0 1731 aa6.87□□□□□ -1.31
ATXN3-232ENST00000555381 ANKRD36BQ8N2N9 1353 aa6.86□□□□□ -1.31
ATXN3-232ENST00000555381 USP17L3A6NCW0 530 aa6.86□□□□□ -1.31
ATXN3-232ENST00000555381 USP17L4A6NCW7 530 aa6.86□□□□□ -1.31
ATXN3-232ENST00000555381 PALM3A6NDB9 673 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-232ENST00000555381 CENPCQ03188 943 aa6.86□□□□□ -1.31
ATXN3-232ENST00000555381 USP17L2Q6R6M4 530 aa6.86□□□□□ -1.31
ATXN3-232ENST00000555381 C1orf229Q6ZS94 237 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-232ENST00000555381 USP17L1Q7RTZ2 530 aa6.86□□□□□ -1.31
ATXN3-232ENST00000555381 NME9Q86XW9 330 aa6.86□□□□□ -1.31
ATXN3-232ENST00000555381 CNKSR1Q969H4 720 aa6.86□□□□□ -1.31
ATXN3-232ENST00000555381 LTV1Q96GA3 475 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-232ENST00000555381 PPP1R12CQ9BZL4 782 aa6.86□□□□□ -1.31
ATXN3-232ENST00000555381 NOD1Q9Y239 953 aa6.86□□□□□ -1.31
ATXN3-232ENST00000555381 MAFBQ9Y5Q3 323 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-232ENST00000555381 COL18A1P39060 1754 aa6.86□□□□□ -1.31
ATXN3-232ENST00000555381 ARHGEF28Q8N1W1 1705 aaKnown RBP6.86□□□□□ -1.31
ATXN3-232ENST00000555381 USP47Q96K76 1375 aa6.85□□□□□ -1.31
ATXN3-232ENST00000555381 TOPAZ1Q8N9V7 1692 aa6.85□□□□□ -1.31
ATXN3-232ENST00000555381 CEP350Q5VT06 3117 aa6.85□□□□□ -1.31
ATXN3-232ENST00000555381 A0A1B0GTH6 734 aa6.85□□□□□ -1.31
ATXN3-232ENST00000555381 TMEM229AB2RXF0 380 aa6.85□□□□□ -1.31
ATXN3-232ENST00000555381 ZBTB7BO15156 539 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-232ENST00000555381 ITGB7P26010 798 aa6.85□□□□□ -1.31
ATXN3-232ENST00000555381 EDARADDQ8WWZ3 215 aa6.85□□□□□ -1.31
ATXN3-232ENST00000555381 ZSCAN10Q96SZ4 725 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-232ENST00000555381 GDF2Q9UK05 429 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-232ENST00000555381 PAPPAQ13219 1627 aa6.85□□□□□ -1.31
ATXN3-232ENST00000555381 ABCC6O95255 1503 aa6.85□□□□□ -1.31
ATXN3-232ENST00000555381 TRPM1Q7Z4N2 1603 aa6.84□□□□□ -1.31
ATXN3-232ENST00000555381 IGSF1Q8N6C5 1336 aa6.84□□□□□ -1.31
ATXN3-232ENST00000555381 INHAP05111 366 aa6.84□□□□□ -1.31
ATXN3-232ENST00000555381 AMPD1P23109 780 aa6.84□□□□□ -1.31
ATXN3-232ENST00000555381 GTF2E1P29083 439 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-232ENST00000555381 GDF10P55107 478 aa6.84□□□□□ -1.31
ATXN3-232ENST00000555381 GTF2IP78347 998 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms