RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 TRIM75PA6NK02 468 aa4.48□□□□□ -1.69
KTN1-217ENST00000554831 TTLL5Q6EMB2 1281 aa4.48□□□□□ -1.69
KTN1-217ENST00000554831 PYM1Q9BRP8 204 aaKnown RBP4.48□□□□□ -1.69
KTN1-217ENST00000554831 SLC26A6Q9BXS9 759 aa4.48□□□□□ -1.69
KTN1-217ENST00000554831 MAGEC2Q9UBF1 373 aaPredicted RBP4.48□□□□□ -1.69
KTN1-217ENST00000554831 ZNF215Q9UL58 517 aaPredicted RBP4.48□□□□□ -1.69
KTN1-217ENST00000554831 PYCARDQ9ULZ3 195 aa4.48□□□□□ -1.69
KTN1-217ENST00000554831 SALL3Q9BXA9 1300 aa4.48□□□□□ -1.69
KTN1-217ENST00000554831 ARHGAP6O43182 974 aa4.48□□□□□ -1.69
KTN1-217ENST00000554831 HSPD1P10809 573 aaKnown RBP4.48□□□□□ -1.69
KTN1-217ENST00000554831 RAB11FIP4Q86YS3 637 aa4.48□□□□□ -1.69
KTN1-217ENST00000554831 SEC62Q99442 399 aaKnown RBP4.48□□□□□ -1.69
KTN1-217ENST00000554831 LUC7LQ9NQ29 371 aaKnown RBP4.48□□□□□ -1.69
KTN1-217ENST00000554831 RAI14Q9P0K7 980 aa4.48□□□□□ -1.69
KTN1-217ENST00000554831 MRVI1Q9Y6F6 885 aa4.48□□□□□ -1.69
KTN1-217ENST00000554831 CRB1P82279 1406 aa4.48□□□□□ -1.69
KTN1-217ENST00000554831 CFAP74Q9C0B2 1584 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 E7EWF7 191 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 N4BP3O15049 544 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 SLC5A1P13866 664 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 WTAPQ15007 396 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 SYT10Q6XYQ8 523 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 KRT23Q9C075 422 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 SPTLC3Q9NUV7 552 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 ALKQ9UM73 1620 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 CEP152O94986 1710 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 GPAA1O43292 621 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 U2AF2P26368 475 aaKnown RBP eCLIP4.47□□□□□ -1.691e-8■■□□□ 12
KTN1-217ENST00000554831 PTPN12Q05209 780 aaKnown RBP4.47□□□□□ -1.69
KTN1-217ENST00000554831 NOM1Q5C9Z4 860 aaKnown RBP4.47□□□□□ -1.69
KTN1-217ENST00000554831 OTUD7BQ6GQQ9 843 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 KRI1Q8N9T8 703 aaKnown RBP4.47□□□□□ -1.69
KTN1-217ENST00000554831 MLKLQ8NB16 471 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 NDUFB9Q9Y6M9 179 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 CMA1P23946 247 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 UBA7P41226 1012 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 RTN1Q16799 776 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 LRRC8AQ8IWT6 810 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 NSUN7Q8NE18 718 aaKnown RBP4.47□□□□□ -1.69
KTN1-217ENST00000554831 ESR2Q92731 530 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 RUFY1Q96T51 708 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 IGSF3O75054 1194 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 A1BGP04217 495 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 FANCCQ00597 558 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 CCDC12Q8WUD4 166 aaPredicted RBP4.47□□□□□ -1.69
KTN1-217ENST00000554831 RTEL1Q9NZ71 1219 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 PPRC1Q5VV67 1664 aaKnown RBP4.47□□□□□ -1.69
KTN1-217ENST00000554831 QRICH2Q9H0J4 1663 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 PSDA5PKW4 1024 aaPredicted RBP4.47□□□□□ -1.69
KTN1-217ENST00000554831 MYO1BO43795 1136 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 IGKV5-2P06315 115 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 CCDC175P0C221 793 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 EIF5P55010 431 aaKnown RBP4.47□□□□□ -1.69
KTN1-217ENST00000554831 CATIPQ7Z7H3 387 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 ZNF589Q86UQ0 364 aaPredicted RBP4.47□□□□□ -1.69
KTN1-217ENST00000554831 CPLX3Q8WVH0 158 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 CTAGE1Q96RT6 745 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 XPO4Q9C0E2 1151 aaKnown RBP4.47□□□□□ -1.69
KTN1-217ENST00000554831 KCNH3Q9ULD8 1083 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 PCDHA7Q9UN72 937 aa4.47□□□□□ -1.69
KTN1-217ENST00000554831 NEXMIFQ5QGS0 1516 aa4.46□□□□□ -1.69
KTN1-217ENST00000554831 USP42Q9H9J4 1324 aaKnown RBP4.46□□□□□ -1.69
KTN1-217ENST00000554831 SETD1BQ9UPS6 1966 aaKnown RBP4.46□□□□□ -1.69
KTN1-217ENST00000554831 POTEB2H3BUK9 544 aa4.46□□□□□ -1.69
KTN1-217ENST00000554831 RANBP6O60518 1105 aaKnown RBP4.46□□□□□ -1.69
KTN1-217ENST00000554831 FGAP02671 866 aa4.46□□□□□ -1.69
KTN1-217ENST00000554831 PDIA3P30101 505 aaKnown RBP4.46□□□□□ -1.69
KTN1-217ENST00000554831 PPP2R5BQ15173 497 aa4.46□□□□□ -1.69
KTN1-217ENST00000554831 ZMYM1Q5SVZ6 1142 aa4.46□□□□□ -1.69
KTN1-217ENST00000554831 KRT40Q6A162 431 aa4.46□□□□□ -1.69
KTN1-217ENST00000554831 FAM89AQ96GI7 184 aa4.46□□□□□ -1.69
KTN1-217ENST00000554831 UTP14AQ9BVJ6 771 aaKnown RBP4.46□□□□□ -1.69
KTN1-217ENST00000554831 NFE2L3Q9Y4A8 694 aa4.46□□□□□ -1.69
KTN1-217ENST00000554831 CUTAO60888 179 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 MAP9Q49MG5 647 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 SARM1Q6SZW1 724 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 DIS3L2Q8IYB7 885 aaKnown RBP4.46□□□□□ -1.7
KTN1-217ENST00000554831 CRACR2AQ9BSW2 395 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 NRBP1Q9UHY1 535 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 ERBB3P21860 1342 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 POLR3GO15318 223 aaPredicted RBP4.46□□□□□ -1.7
KTN1-217ENST00000554831 PHKG2P15735 406 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 CASQ1P31415 396 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 ADD1P35611 737 aaKnown RBP4.46□□□□□ -1.7
KTN1-217ENST00000554831 SCRN1Q12765 414 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 RESTQ13127 1097 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 SYCP1Q15431 976 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 CAVIN4Q5BKX8 364 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 CCDC144CPQ8IYA2 1237 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 TXLNBQ8N3L3 684 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 CAGE1Q8TC20 777 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 ALDH8A1Q9H2A2 487 aaPredicted RBP4.46□□□□□ -1.7
KTN1-217ENST00000554831 POLR3EQ9NVU0 708 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 TLR7Q9NYK1 1049 aaKnown RBP4.46□□□□□ -1.7
KTN1-217ENST00000554831 ERICH4A6NGS2 130 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 GNAT2P19087 354 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 TCIRG1Q13488 830 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 IQUBQ8NA54 791 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 LINC00301Q8NCQ3 95 aa4.46□□□□□ -1.7
KTN1-217ENST00000554831 NOC3LQ8WTT2 800 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms