RNA–Protein interactions for RNA: ENST00000554822.5

LINC01550-204, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 3

Gene LINC01550, Length 852 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-204ENST00000554822 CD68P34810 354 aaPredicted RBP8.41□□□□□ -1.06
LINC01550-204ENST00000554822 DSC3Q14574 896 aa8.41□□□□□ -1.06
LINC01550-204ENST00000554822 HGSNATQ68CP4 663 aa8.41□□□□□ -1.06
LINC01550-204ENST00000554822 VN1R5Q7Z5H4 357 aa8.41□□□□□ -1.06
LINC01550-204ENST00000554822 SLC7A3Q8WY07 619 aa8.41□□□□□ -1.06
LINC01550-204ENST00000554822 KLHDC7BQ96G42 594 aa8.41□□□□□ -1.06
LINC01550-204ENST00000554822 TCF12Q99081 682 aa8.41□□□□□ -1.06
LINC01550-204ENST00000554822 KCNK4Q9NYG8 393 aa8.41□□□□□ -1.06
LINC01550-204ENST00000554822 DDX3YO15523 660 aaKnown RBP8.4□□□□□ -1.06
LINC01550-204ENST00000554822 TREHO43280 583 aa8.4□□□□□ -1.06
LINC01550-204ENST00000554822 ALX3O95076 343 aa8.4□□□□□ -1.06
LINC01550-204ENST00000554822 GRIA4P48058 902 aa8.4□□□□□ -1.06
LINC01550-204ENST00000554822 IREB2P48200 963 aaKnown RBP8.4□□□□□ -1.06
LINC01550-204ENST00000554822 FOXD4L6Q3SYB3 417 aaPredicted RBP8.4□□□□□ -1.06
LINC01550-204ENST00000554822 KIAA0319Q5VV43 1072 aa8.4□□□□□ -1.06
LINC01550-204ENST00000554822 FOXD4L3Q6VB84 417 aaPredicted RBP8.4□□□□□ -1.06
LINC01550-204ENST00000554822 TXNRD3Q86VQ6 643 aa8.4□□□□□ -1.06
LINC01550-204ENST00000554822 CCNJLQ8IV13 435 aa8.4□□□□□ -1.06
LINC01550-204ENST00000554822 ZSCAN29Q8IWY8 852 aaPredicted RBP8.4□□□□□ -1.06
LINC01550-204ENST00000554822 EPS8L3Q8TE67 593 aaKnown RBP8.4□□□□□ -1.06
LINC01550-204ENST00000554822 WFDC12Q8WWY7 111 aa8.4□□□□□ -1.06
LINC01550-204ENST00000554822 EHD4Q9H223 541 aa8.4□□□□□ -1.06
LINC01550-204ENST00000554822 SEC31BQ9NQW1 1179 aa8.4□□□□□ -1.06
LINC01550-204ENST00000554822 WIZO95785 1651 aa8.4□□□□□ -1.07
LINC01550-204ENST00000554822 GADD45BO75293 160 aaPredicted RBP8.39□□□□□ -1.07
LINC01550-204ENST00000554822 FURINP09958 794 aa8.39□□□□□ -1.07
LINC01550-204ENST00000554822 NOS3P29474 1203 aa8.39□□□□□ -1.07
LINC01550-204ENST00000554822 PIP4K2BP78356 416 aa8.39□□□□□ -1.07
LINC01550-204ENST00000554822 IKBKEQ14164 716 aa8.39□□□□□ -1.07
LINC01550-204ENST00000554822 SPRED3Q2MJR0 410 aa8.39□□□□□ -1.07
LINC01550-204ENST00000554822 KLHL23Q8NBE8 558 aa8.39□□□□□ -1.07
LINC01550-204ENST00000554822 ASB16Q96NS5 453 aa8.39□□□□□ -1.07
LINC01550-204ENST00000554822 MRPL18Q9H0U6 180 aaKnown RBP8.39□□□□□ -1.07
LINC01550-204ENST00000554822 A0A096LPE4 126 aa8.38□□□□□ -1.07
LINC01550-204ENST00000554822 A0A1W2PPZ6 126 aa8.38□□□□□ -1.07
LINC01550-204ENST00000554822 SOX1O00570 391 aaPredicted RBP8.38□□□□□ -1.07
LINC01550-204ENST00000554822 WISP1O95388 367 aa8.38□□□□□ -1.07
LINC01550-204ENST00000554822 PI16Q6UXB8 463 aa8.38□□□□□ -1.07
LINC01550-204ENST00000554822 DCAF11Q8TEB1 546 aa8.38□□□□□ -1.07
LINC01550-204ENST00000554822 TPSG1Q9NRR2 321 aa8.38□□□□□ -1.07
LINC01550-204ENST00000554822 RIMBP3CA6NJZ7 1639 aa8.38□□□□□ -1.07
LINC01550-204ENST00000554822 RIMBP3BA6NNM3 1639 aa8.38□□□□□ -1.07
LINC01550-204ENST00000554822 RIMBP3Q9UFD9 1639 aa8.38□□□□□ -1.07
LINC01550-204ENST00000554822 PNMA6FA0A0J9YX94 578 aa8.37□□□□□ -1.07
LINC01550-204ENST00000554822 F8W735 103 aaPredicted RBP8.37□□□□□ -1.07
LINC01550-204ENST00000554822 ADAM11O75078 769 aa8.37□□□□□ -1.07
LINC01550-204ENST00000554822 SND1Q7KZF4 910 aaKnown RBP eCLIP8.37□□□□□ -1.07
LINC01550-204ENST00000554822 AGGF1Q8N302 714 aaeCLIP8.37□□□□□ -1.07
LINC01550-204ENST00000554822 FOXD4L4Q8WXT5 416 aaPredicted RBP8.37□□□□□ -1.07
LINC01550-204ENST00000554822 WNT8BQ93098 351 aa8.37□□□□□ -1.07
LINC01550-204ENST00000554822 AKTIPQ9H8T0 292 aa8.37□□□□□ -1.07
LINC01550-204ENST00000554822 MAPK8P45983 427 aa8.36□□□□□ -1.07
LINC01550-204ENST00000554822 ARL4DP49703 201 aa8.36□□□□□ -1.07
LINC01550-204ENST00000554822 NLRP12P59046 1061 aa8.36□□□□□ -1.07
LINC01550-204ENST00000554822 C19orf57Q0VDD7 668 aa8.36□□□□□ -1.07
LINC01550-204ENST00000554822 ENOX2Q16206 610 aaKnown RBP8.36□□□□□ -1.07
LINC01550-204ENST00000554822 TMEM130Q8N3G9 435 aa8.36□□□□□ -1.07
LINC01550-204ENST00000554822 OSGEPQ9NPF4 335 aa8.36□□□□□ -1.07
LINC01550-204ENST00000554822 ERCC6L2Q5T890 1561 aa8.35□□□□□ -1.07
LINC01550-204ENST00000554822 ESRRAP11474 423 aaPredicted RBP8.35□□□□□ -1.07
LINC01550-204ENST00000554822 GRM2Q14416 872 aa8.35□□□□□ -1.07
LINC01550-204ENST00000554822 DUOXA2Q1HG44 320 aa8.35□□□□□ -1.07
LINC01550-204ENST00000554822 ACAD11Q709F0 780 aa8.35□□□□□ -1.07
LINC01550-204ENST00000554822 UBASH3BQ8TF42 649 aa8.35□□□□□ -1.07
LINC01550-204ENST00000554822 SETDB2Q96T68 719 aa8.35□□□□□ -1.07
LINC01550-204ENST00000554822 NLRP2Q9NX02 1062 aa8.35□□□□□ -1.07
LINC01550-204ENST00000554822 FMR1Q06787 632 aaKnown RBP eCLIP8.34□□□□□ -1.07
LINC01550-204ENST00000554822 PCDH1Q08174 1060 aa8.34□□□□□ -1.07
LINC01550-204ENST00000554822 ZNF423Q2M1K9 1284 aa8.34□□□□□ -1.07
LINC01550-204ENST00000554822 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.34□□□□□ -1.07
LINC01550-204ENST00000554822 GLIS3Q8NEA6 775 aa8.34□□□□□ -1.07
LINC01550-204ENST00000554822 TP53INP1Q96A56 240 aa8.34□□□□□ -1.07
LINC01550-204ENST00000554822 MEGF10Q96KG7 1140 aa8.34□□□□□ -1.07
LINC01550-204ENST00000554822 SSBP4Q9BWG4 385 aaPredicted RBP8.34□□□□□ -1.07
LINC01550-204ENST00000554822 ABCB6Q9NP58 842 aa8.34□□□□□ -1.07
LINC01550-204ENST00000554822 WWC3Q9ULE0 1092 aa8.34□□□□□ -1.07
LINC01550-204ENST00000554822 PEG3Q9GZU2 1588 aa8.34□□□□□ -1.07
LINC01550-204ENST00000554822 TOP2AP11388 1531 aaKnown RBP8.34□□□□□ -1.08
LINC01550-204ENST00000554822 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.33□□□□□ -1.08
LINC01550-204ENST00000554822 CLEC4MQ9H2X3 399 aaPredicted RBP8.33□□□□□ -1.08
LINC01550-204ENST00000554822 TMEM238LA0A1B0GVL6 79 aa8.32□□□□□ -1.08
LINC01550-204ENST00000554822 GSTM4Q03013 218 aa8.32□□□□□ -1.08
LINC01550-204ENST00000554822 PRPF40BQ6NWY9 871 aaKnown RBP8.32□□□□□ -1.08
LINC01550-204ENST00000554822 KIAA1211Q6ZU35 1233 aa8.32□□□□□ -1.08
LINC01550-204ENST00000554822 GZF1Q9H116 711 aaPredicted RBP8.32□□□□□ -1.08
LINC01550-204ENST00000554822 ZNF576Q9H609 170 aa8.32□□□□□ -1.08
LINC01550-204ENST00000554822 ADAM23O75077 832 aa8.31□□□□□ -1.08
LINC01550-204ENST00000554822 P4HBP07237 508 aaKnown RBP8.31□□□□□ -1.08
LINC01550-204ENST00000554822 GLB1P16278 677 aa8.31□□□□□ -1.08
LINC01550-204ENST00000554822 ITPKAP23677 461 aa8.31□□□□□ -1.08
LINC01550-204ENST00000554822 RSPO4Q2I0M5 234 aaPredicted RBP8.31□□□□□ -1.08
LINC01550-204ENST00000554822 NKAPLQ5M9Q1 402 aa8.31□□□□□ -1.08
LINC01550-204ENST00000554822 BCO2Q9BYV7 579 aa8.31□□□□□ -1.08
LINC01550-204ENST00000554822 SEMA6BQ9H3T3 888 aa8.31□□□□□ -1.08
LINC01550-204ENST00000554822 SOX17Q9H6I2 414 aaPredicted RBP8.31□□□□□ -1.08
LINC01550-204ENST00000554822 TRAK1Q9UPV9 953 aa8.31□□□□□ -1.08
LINC01550-204ENST00000554822 K7ELQ4 463 aaPredicted RBP8.3□□□□□ -1.08
LINC01550-204ENST00000554822 NXPE4Q6UWF7 544 aa8.3□□□□□ -1.08
LINC01550-204ENST00000554822 DZIP1LQ8IYY4 767 aaKnown RBP8.3□□□□□ -1.08
LINC01550-204ENST00000554822 USP26Q9BXU7 913 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms