RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.11□□□□□ -1.27
SCFD1-214ENST00000554819 PRPF40BQ6NWY9 871 aaKnown RBP7.11□□□□□ -1.27
SCFD1-214ENST00000554819 TXNDC11Q6PKC3 985 aa7.11□□□□□ -1.27
SCFD1-214ENST00000554819 LENG1Q96BZ8 264 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-214ENST00000554819 FRMD6Q96NE9 622 aa7.11□□□□□ -1.27
SCFD1-214ENST00000554819 SEC31BQ9NQW1 1179 aa7.11□□□□□ -1.27
SCFD1-214ENST00000554819 METTL12A8MUP2 240 aa7.1□□□□□ -1.27
SCFD1-214ENST00000554819 DLL1O00548 723 aa7.1□□□□□ -1.27
SCFD1-214ENST00000554819 TRIM26Q12899 539 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-214ENST00000554819 PLA2G4EQ3MJ16 856 aa7.1□□□□□ -1.27
SCFD1-214ENST00000554819 VN1R5Q7Z5H4 357 aa7.1□□□□□ -1.27
SCFD1-214ENST00000554819 BCO2Q9BYV7 579 aa7.1□□□□□ -1.27
SCFD1-214ENST00000554819 SRCIN1Q9C0H9 1055 aa7.1□□□□□ -1.27
SCFD1-214ENST00000554819 CLEC4MQ9H2X3 399 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-214ENST00000554819 WWC3Q9ULE0 1092 aa7.1□□□□□ -1.27
SCFD1-214ENST00000554819 SPG7Q9UQ90 795 aa7.1□□□□□ -1.27
SCFD1-214ENST00000554819 TMEM238LA0A1B0GVL6 79 aa7.09□□□□□ -1.27
SCFD1-214ENST00000554819 C1QTNF9BB2RNN3 333 aa7.09□□□□□ -1.27
SCFD1-214ENST00000554819 XRCC5P13010 732 aaKnown RBP7.09□□□□□ -1.27
SCFD1-214ENST00000554819 SELPP16109 830 aa7.09□□□□□ -1.27
SCFD1-214ENST00000554819 ITPKAP23677 461 aa7.09□□□□□ -1.27
SCFD1-214ENST00000554819 CD68P34810 354 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-214ENST00000554819 SUZ12Q15022 739 aaKnown RBP7.09□□□□□ -1.27
SCFD1-214ENST00000554819 SPRED3Q2MJR0 410 aa7.09□□□□□ -1.27
SCFD1-214ENST00000554819 PI16Q6UXB8 463 aa7.09□□□□□ -1.27
SCFD1-214ENST00000554819 NPAS4Q8IUM7 802 aa7.09□□□□□ -1.27
SCFD1-214ENST00000554819 SLC7A3Q8WY07 619 aa7.09□□□□□ -1.27
SCFD1-214ENST00000554819 MRPL18Q9H0U6 180 aaKnown RBP7.09□□□□□ -1.27
SCFD1-214ENST00000554819 SOX17Q9H6I2 414 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-214ENST00000554819 USP21Q9UK80 565 aa7.09□□□□□ -1.27
SCFD1-214ENST00000554819 SOX1O00570 391 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-214ENST00000554819 PRPF40AO75400 957 aaKnown RBP7.08□□□□□ -1.28
SCFD1-214ENST00000554819 IGHA1P01876 353 aa7.08□□□□□ -1.28
SCFD1-214ENST00000554819 C19orf57Q0VDD7 668 aa7.08□□□□□ -1.28
SCFD1-214ENST00000554819 DTHD1Q6ZMT9 781 aa7.08□□□□□ -1.28
SCFD1-214ENST00000554819 CD163Q86VB7 1156 aa7.08□□□□□ -1.28
SCFD1-214ENST00000554819 GALNT11Q8NCW6 608 aa7.08□□□□□ -1.28
SCFD1-214ENST00000554819 GLIS3Q8NEA6 775 aa7.08□□□□□ -1.28
SCFD1-214ENST00000554819 DDX54Q8TDD1 881 aaKnown RBP7.08□□□□□ -1.28
SCFD1-214ENST00000554819 CARD10Q9BWT7 1032 aa7.08□□□□□ -1.28
SCFD1-214ENST00000554819 ABCB6Q9NP58 842 aa7.08□□□□□ -1.28
SCFD1-214ENST00000554819 ESRRAP11474 423 aaPredicted RBP7.07□□□□□ -1.28
SCFD1-214ENST00000554819 CHRNA4P43681 627 aa7.07□□□□□ -1.28
SCFD1-214ENST00000554819 PCDH1Q08174 1060 aa7.07□□□□□ -1.28
SCFD1-214ENST00000554819 RPS26P11Q5JNZ5 115 aaPredicted RBP7.07□□□□□ -1.28
SCFD1-214ENST00000554819 NXPE4Q6UWF7 544 aa7.07□□□□□ -1.28
SCFD1-214ENST00000554819 SHISA2Q6UWI4 295 aa7.07□□□□□ -1.28
SCFD1-214ENST00000554819 TMEM130Q8N3G9 435 aa7.07□□□□□ -1.28
SCFD1-214ENST00000554819 KLHDC7BQ96G42 594 aa7.07□□□□□ -1.28
SCFD1-214ENST00000554819 SETDB2Q96T68 719 aa7.07□□□□□ -1.28
SCFD1-214ENST00000554819 ZNF576Q9H609 170 aa7.07□□□□□ -1.28
SCFD1-214ENST00000554819 MFAP1P55081 439 aaKnown RBP7.06□□□□□ -1.28
SCFD1-214ENST00000554819 FCGRTP55899 365 aa7.06□□□□□ -1.28
SCFD1-214ENST00000554819 ADGRE1Q14246 886 aa7.06□□□□□ -1.28
SCFD1-214ENST00000554819 MSTNO14793 375 aa7.05□□□□□ -1.28
SCFD1-214ENST00000554819 TM4SF5O14894 197 aa7.05□□□□□ -1.28
SCFD1-214ENST00000554819 GNA15P30679 374 aa7.05□□□□□ -1.28
SCFD1-214ENST00000554819 GSTT1P30711 240 aa7.05□□□□□ -1.28
SCFD1-214ENST00000554819 ITGAEP38570 1179 aa7.05□□□□□ -1.28
SCFD1-214ENST00000554819 GATA4P43694 442 aa7.05□□□□□ -1.28
SCFD1-214ENST00000554819 DUOXA2Q1HG44 320 aa7.05□□□□□ -1.28
SCFD1-214ENST00000554819 ZNF423Q2M1K9 1284 aa7.05□□□□□ -1.28
SCFD1-214ENST00000554819 GPAT2Q6NUI2 795 aa7.05□□□□□ -1.28
SCFD1-214ENST00000554819 C12orf49Q9H741 205 aa7.05□□□□□ -1.28
SCFD1-214ENST00000554819 FAM8A1Q9UBU6 413 aa7.05□□□□□ -1.28
SCFD1-214ENST00000554819 B3GALT4O96024 378 aa7.04□□□□□ -1.28
SCFD1-214ENST00000554819 XPCQ01831 940 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-214ENST00000554819 GSTM4Q03013 218 aa7.04□□□□□ -1.28
SCFD1-214ENST00000554819 MBTPS1Q14703 1052 aa7.04□□□□□ -1.28
SCFD1-214ENST00000554819 FOXD4L6Q3SYB3 417 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-214ENST00000554819 FOXD4L3Q6VB84 417 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-214ENST00000554819 FBXO33Q7Z6M2 555 aa7.04□□□□□ -1.28
SCFD1-214ENST00000554819 TXNRD3Q86VQ6 643 aa7.04□□□□□ -1.28
SCFD1-214ENST00000554819 DUSP9Q99956 384 aaKnown RBP7.04□□□□□ -1.28
SCFD1-214ENST00000554819 OSBPL7Q9BZF2 842 aa7.04□□□□□ -1.28
SCFD1-214ENST00000554819 BCL11AQ9H165 835 aa7.04□□□□□ -1.28
SCFD1-214ENST00000554819 AKTIPQ9H8T0 292 aa7.04□□□□□ -1.28
SCFD1-214ENST00000554819 AKAP2Q9Y2D5 859 aa7.04□□□□□ -1.28
SCFD1-214ENST00000554819 ITGB2P05107 769 aa7.03□□□□□ -1.28
SCFD1-214ENST00000554819 CYP11A1P05108 521 aa7.03□□□□□ -1.28
SCFD1-214ENST00000554819 EIF4BP23588 611 aaKnown RBP7.03□□□□□ -1.28
SCFD1-214ENST00000554819 NLRP12P59046 1061 aa7.03□□□□□ -1.28
SCFD1-214ENST00000554819 PPP2R3AQ06190 1150 aa7.03□□□□□ -1.28
SCFD1-214ENST00000554819 HGSNATQ68CP4 663 aa7.03□□□□□ -1.28
SCFD1-214ENST00000554819 WFDC12Q8WWY7 111 aa7.03□□□□□ -1.28
SCFD1-214ENST00000554819 KCNK4Q9NYG8 393 aa7.03□□□□□ -1.28
SCFD1-214ENST00000554819 AK5Q9Y6K8 562 aa7.03□□□□□ -1.28
SCFD1-214ENST00000554819 F8W735 103 aaPredicted RBP7.02□□□□□ -1.29
SCFD1-214ENST00000554819 DDX3YO15523 660 aaKnown RBP7.02□□□□□ -1.29
SCFD1-214ENST00000554819 ZNF326Q5BKZ1 582 aaKnown RBP7.02□□□□□ -1.29
SCFD1-214ENST00000554819 ACAD11Q709F0 780 aa7.02□□□□□ -1.29
SCFD1-214ENST00000554819 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.02□□□□□ -1.29
SCFD1-214ENST00000554819 FOXD4L4Q8WXT5 416 aaPredicted RBP7.02□□□□□ -1.29
SCFD1-214ENST00000554819 SPOCK3Q9BQ16 436 aa7.02□□□□□ -1.29
SCFD1-214ENST00000554819 BCL2L13Q9BXK5 485 aa7.02□□□□□ -1.29
SCFD1-214ENST00000554819 PARP2Q9UGN5 583 aa7.02□□□□□ -1.29
SCFD1-214ENST00000554819 PPM1HQ9ULR3 514 aa7.02□□□□□ -1.29
SCFD1-214ENST00000554819 ADAM11O75078 769 aa7.01□□□□□ -1.29
SCFD1-214ENST00000554819 IREB2P48200 963 aaKnown RBP7.01□□□□□ -1.29
SCFD1-214ENST00000554819 DAB2P98082 770 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms