RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 LTV1Q96GA3 475 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-229ENST00000554672 CFHR5Q9BXR6 569 aa6.86□□□□□ -1.31
ATXN3-229ENST00000554672 COL18A1P39060 1754 aa6.86□□□□□ -1.31
ATXN3-229ENST00000554672 ARHGEF28Q8N1W1 1705 aaKnown RBP6.86□□□□□ -1.31
ATXN3-229ENST00000554672 USP47Q96K76 1375 aa6.85□□□□□ -1.31
ATXN3-229ENST00000554672 TOPAZ1Q8N9V7 1692 aa6.85□□□□□ -1.31
ATXN3-229ENST00000554672 CEP350Q5VT06 3117 aa6.85□□□□□ -1.31
ATXN3-229ENST00000554672 TMEM229AB2RXF0 380 aa6.85□□□□□ -1.31
ATXN3-229ENST00000554672 GDF10P55107 478 aa6.85□□□□□ -1.31
ATXN3-229ENST00000554672 SEMA3FQ13275 785 aa6.85□□□□□ -1.31
ATXN3-229ENST00000554672 TLR1Q15399 786 aa6.85□□□□□ -1.31
ATXN3-229ENST00000554672 POM121Q96HA1 1249 aa6.85□□□□□ -1.31
ATXN3-229ENST00000554672 ALG2Q9H553 416 aa6.85□□□□□ -1.31
ATXN3-229ENST00000554672 PCDHGA11Q9Y5H2 935 aa6.85□□□□□ -1.31
ATXN3-229ENST00000554672 PAPPAQ13219 1627 aa6.85□□□□□ -1.31
ATXN3-229ENST00000554672 ABCC6O95255 1503 aa6.85□□□□□ -1.31
ATXN3-229ENST00000554672 TRPM1Q7Z4N2 1603 aa6.84□□□□□ -1.31
ATXN3-229ENST00000554672 IGSF1Q8N6C5 1336 aa6.84□□□□□ -1.31
ATXN3-229ENST00000554672 CNTNAP5Q8WYK1 1306 aa6.84□□□□□ -1.31
ATXN3-229ENST00000554672 COL13A1Q5TAT6 717 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-229ENST00000554672 C1orf229Q6ZS94 237 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-229ENST00000554672 HDGFL2Q7Z4V5 671 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-229ENST00000554672 TMC1Q8TDI8 760 aa6.84□□□□□ -1.31
ATXN3-229ENST00000554672 KLRG1Q96E93 195 aa6.84□□□□□ -1.31
ATXN3-229ENST00000554672 SCARF2Q96GP6 870 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-229ENST00000554672 NDFIP2Q9NV92 336 aa6.84□□□□□ -1.31
ATXN3-229ENST00000554672 NHSQ6T4R5 1651 aa6.84□□□□□ -1.32
ATXN3-229ENST00000554672 CGNL1Q0VF96 1302 aa6.83□□□□□ -1.32
ATXN3-229ENST00000554672 NFAT5O94916 1531 aa6.83□□□□□ -1.32
ATXN3-229ENST00000554672 C2CD2LO14523 706 aa6.83□□□□□ -1.32
ATXN3-229ENST00000554672 OIP5O43482 229 aa6.83□□□□□ -1.32
ATXN3-229ENST00000554672 SOX11P35716 441 aa6.83□□□□□ -1.32
ATXN3-229ENST00000554672 AMPHP49418 695 aa6.83□□□□□ -1.32
ATXN3-229ENST00000554672 PRELPP51888 382 aa6.83□□□□□ -1.32
ATXN3-229ENST00000554672 SMTNP53814 917 aa6.83□□□□□ -1.32
ATXN3-229ENST00000554672 TNS4Q8IZW8 715 aa6.83□□□□□ -1.32
ATXN3-229ENST00000554672 JMYQ8N9B5 988 aa6.83□□□□□ -1.32
ATXN3-229ENST00000554672 SMARCC1Q92922 1105 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-229ENST00000554672 L3MBTL2Q969R5 705 aa6.83□□□□□ -1.32
ATXN3-229ENST00000554672 SLC4A9Q96Q91 983 aa6.83□□□□□ -1.32
ATXN3-229ENST00000554672 CRISPLD1Q9H336 500 aa6.83□□□□□ -1.32
ATXN3-229ENST00000554672 ENAMQ9NRM1 1142 aa6.83□□□□□ -1.32
ATXN3-229ENST00000554672 TERF2IPQ9NYB0 399 aa6.83□□□□□ -1.32
ATXN3-229ENST00000554672 HCN2Q9UL51 889 aa6.83□□□□□ -1.32
ATXN3-229ENST00000554672 WWC3Q9ULE0 1092 aa6.83□□□□□ -1.32
ATXN3-229ENST00000554672 USP3Q9Y6I4 520 aa6.83□□□□□ -1.32
ATXN3-229ENST00000554672 NSD2O96028 1365 aa6.82□□□□□ -1.32
ATXN3-229ENST00000554672 BNIP3LO60238 219 aa6.82□□□□□ -1.32
ATXN3-229ENST00000554672 GTF2E1P29083 439 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-229ENST00000554672 TGFB2P61812 414 aa6.82□□□□□ -1.32
ATXN3-229ENST00000554672 FSTL1Q12841 308 aa6.82□□□□□ -1.32
ATXN3-229ENST00000554672 LBRQ14739 615 aaKnown RBP6.82□□□□□ -1.32
ATXN3-229ENST00000554672 KANK3Q6NY19 840 aa6.82□□□□□ -1.32
ATXN3-229ENST00000554672 ABHD17AQ96GS6 310 aa6.82□□□□□ -1.32
ATXN3-229ENST00000554672 OXCT2Q9BYC2 517 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-229ENST00000554672 SLC12A5Q9H2X9 1139 aa6.82□□□□□ -1.32
ATXN3-229ENST00000554672 DNAAF2Q9NVR5 837 aaKnown RBP6.82□□□□□ -1.32
ATXN3-229ENST00000554672 SERTAD1Q9UHV2 236 aa6.82□□□□□ -1.32
ATXN3-229ENST00000554672 IQSEC3Q9UPP2 1182 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-229ENST00000554672 SBNO2Q9Y2G9 1366 aa6.82□□□□□ -1.32
ATXN3-229ENST00000554672 SHISA8B8ZZ34 492 aa6.81□□□□□ -1.32
ATXN3-229ENST00000554672 ATP4AP20648 1035 aa6.81□□□□□ -1.32
ATXN3-229ENST00000554672 SSFA2P28290 1259 aa6.81□□□□□ -1.32
ATXN3-229ENST00000554672 HOXC9P31274 260 aa6.81□□□□□ -1.32
ATXN3-229ENST00000554672 PLA2G4AP47712 749 aa6.81□□□□□ -1.32
ATXN3-229ENST00000554672 CTBSQ01459 385 aa6.81□□□□□ -1.32
ATXN3-229ENST00000554672 SUZ12Q15022 739 aaKnown RBP6.81□□□□□ -1.32
ATXN3-229ENST00000554672 MTFR1Q15390 333 aa6.81□□□□□ -1.32
ATXN3-229ENST00000554672 MPRIPQ6WCQ1 1025 aa6.81□□□□□ -1.32
ATXN3-229ENST00000554672 ARHGAP27Q6ZUM4 889 aa6.81□□□□□ -1.32
ATXN3-229ENST00000554672 C16orf71Q8IYS4 520 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-229ENST00000554672 RAPGEF4Q8WZA2 1011 aa6.81□□□□□ -1.32
ATXN3-229ENST00000554672 COG3Q96JB2 828 aa6.81□□□□□ -1.32
ATXN3-229ENST00000554672 NMRK2Q9NPI5 230 aa6.81□□□□□ -1.32
ATXN3-229ENST00000554672 NSFL1CQ9UNZ2 370 aaKnown RBP6.81□□□□□ -1.32
ATXN3-229ENST00000554672 DNMT3AQ9Y6K1 912 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-229ENST00000554672 PIK3C2AO00443 1686 aa6.81□□□□□ -1.32
ATXN3-229ENST00000554672 AKAP12Q02952 1782 aa6.8□□□□□ -1.32
ATXN3-229ENST00000554672 ITGB2P05107 769 aa6.8□□□□□ -1.32
ATXN3-229ENST00000554672 TATP17735 454 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-229ENST00000554672 MAP2K3P46734 347 aa6.8□□□□□ -1.32
ATXN3-229ENST00000554672 NBPF6Q5VWK0 638 aa6.8□□□□□ -1.32
ATXN3-229ENST00000554672 PGBD3Q8N328 593 aa6.8□□□□□ -1.32
ATXN3-229ENST00000554672 NEDD1Q8NHV4 660 aa6.8□□□□□ -1.32
ATXN3-229ENST00000554672 ADAMTS19Q8TE59 1207 aa6.8□□□□□ -1.32
ATXN3-229ENST00000554672 NBPF4Q96M43 638 aa6.8□□□□□ -1.32
ATXN3-229ENST00000554672 PUS7Q96PZ0 661 aaKnown RBP6.8□□□□□ -1.32
ATXN3-229ENST00000554672 NIFKQ9BYG3 293 aaKnown RBP6.8□□□□□ -1.32
ATXN3-229ENST00000554672 ZCCHC2Q9C0B9 1178 aaKnown RBP6.8□□□□□ -1.32
ATXN3-229ENST00000554672 ATXN7L1Q9ULK2 861 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-229ENST00000554672 BCS1LQ9Y276 419 aa6.8□□□□□ -1.32
ATXN3-229ENST00000554672 PALLDQ8WX93 1383 aa6.8□□□□□ -1.32
ATXN3-229ENST00000554672 MAP3K19Q56UN5 1328 aa6.79□□□□□ -1.32
ATXN3-229ENST00000554672 A0A0G2JLW4 131 aa6.79□□□□□ -1.32
ATXN3-229ENST00000554672 A6NJY4 79 aa6.79□□□□□ -1.32
ATXN3-229ENST00000554672 POM121CA8CG34 1229 aa6.79□□□□□ -1.32
ATXN3-229ENST00000554672 CDK2AP1O14519 115 aa6.79□□□□□ -1.32
ATXN3-229ENST00000554672 SKIP12755 728 aa6.79□□□□□ -1.32
ATXN3-229ENST00000554672 SNRPNP63162 240 aaKnown RBP6.79□□□□□ -1.32
ATXN3-229ENST00000554672 HTRA3P83110 453 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms