RNA–Protein interactions for RNA: ENST00000554627.5

MARK3-208, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-208ENST00000554627 KIAA2012Q0VF49 1180 aa11.71□□□□□ -0.53
MARK3-208ENST00000554627 SLC51AQ86UW1 340 aa11.71□□□□□ -0.53
MARK3-208ENST00000554627 SPATA5Q8NB90 893 aa11.71□□□□□ -0.53
MARK3-208ENST00000554627 EVI5LQ96CN4 794 aa11.71□□□□□ -0.53
MARK3-208ENST00000554627 DNAJC2Q99543 621 aaKnown RBP11.71□□□□□ -0.53
MARK3-208ENST00000554627 PAG1Q9NWQ8 432 aa11.71□□□□□ -0.53
MARK3-208ENST00000554627 ECM29Q5VYK3 1845 aa11.71□□□□□ -0.54
MARK3-208ENST00000554627 RIMBP2O15034 1052 aa11.71□□□□□ -0.54
MARK3-208ENST00000554627 PPIP5K2O43314 1243 aa11.71□□□□□ -0.54
MARK3-208ENST00000554627 IGSF3O75054 1194 aa11.71□□□□□ -0.54
MARK3-208ENST00000554627 IL1R1P14778 569 aa11.71□□□□□ -0.54
MARK3-208ENST00000554627 GSPT1P15170 499 aaKnown RBP11.71□□□□□ -0.54
MARK3-208ENST00000554627 MCAMP43121 646 aa11.71□□□□□ -0.54
MARK3-208ENST00000554627 RASGRF1Q13972 1273 aa11.71□□□□□ -0.54
MARK3-208ENST00000554627 CASC1Q6TDU7 716 aa11.71□□□□□ -0.54
MARK3-208ENST00000554627 ZGPATQ8N5A5 531 aaKnown RBP11.71□□□□□ -0.54
MARK3-208ENST00000554627 WWC3Q9ULE0 1092 aa11.71□□□□□ -0.54
MARK3-208ENST00000554627 HIP1O00291 1037 aa11.7□□□□□ -0.54
MARK3-208ENST00000554627 EIF5BO60841 1220 aaKnown RBP11.7□□□□□ -0.54
MARK3-208ENST00000554627 PODNQ7Z5L7 613 aa11.7□□□□□ -0.54
MARK3-208ENST00000554627 TXNRD3Q86VQ6 643 aa11.7□□□□□ -0.54
MARK3-208ENST00000554627 TDRD7Q8NHU6 1098 aaKnown RBP11.7□□□□□ -0.54
MARK3-208ENST00000554627 RILPL2Q969X0 211 aa11.7□□□□□ -0.54
MARK3-208ENST00000554627 GPR101Q96P66 508 aaPredicted RBP11.7□□□□□ -0.54
MARK3-208ENST00000554627 CD209Q9NNX6 404 aa11.7□□□□□ -0.54
MARK3-208ENST00000554627 COL1A1P02452 1464 aaPredicted RBP11.69□□□□□ -0.54
MARK3-208ENST00000554627 CDK5RAP2Q96SN8 1893 aa11.69□□□□□ -0.54
MARK3-208ENST00000554627 WTIPA6NIX2 430 aaPredicted RBP11.69□□□□□ -0.54
MARK3-208ENST00000554627 GOLIM4O00461 696 aa11.69□□□□□ -0.54
MARK3-208ENST00000554627 SDSP20132 328 aa11.69□□□□□ -0.54
MARK3-208ENST00000554627 IARSP41252 1262 aaKnown RBP11.69□□□□□ -0.54
MARK3-208ENST00000554627 AOC3Q16853 763 aa11.69□□□□□ -0.54
MARK3-208ENST00000554627 LARGE2Q8N3Y3 721 aa11.69□□□□□ -0.54
MARK3-208ENST00000554627 WDR66Q8TBY9 1149 aa11.69□□□□□ -0.54
MARK3-208ENST00000554627 TBC1D22AQ8WUA7 517 aa11.69□□□□□ -0.54
MARK3-208ENST00000554627 FSD1Q9BTV5 496 aa11.69□□□□□ -0.54
MARK3-208ENST00000554627 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.69□□□□□ -0.54
MARK3-208ENST00000554627 HMG20BQ9P0W2 317 aa11.69□□□□□ -0.54
MARK3-208ENST00000554627 SRCAPQ6ZRS2 3230 aa11.68□□□□□ -0.54
MARK3-208ENST00000554627 SALL1Q9NSC2 1324 aa11.68□□□□□ -0.54
MARK3-208ENST00000554627 FOCADQ5VW36 1801 aa11.68□□□□□ -0.54
MARK3-208ENST00000554627 ECE2O60344 883 aa11.68□□□□□ -0.54
MARK3-208ENST00000554627 CDC45O75419 566 aa11.68□□□□□ -0.54
MARK3-208ENST00000554627 ZAP70P43403 619 aa11.68□□□□□ -0.54
MARK3-208ENST00000554627 SCARF1Q14162 830 aa11.68□□□□□ -0.54
MARK3-208ENST00000554627 SPTY2D1Q68D10 685 aaPredicted RBP11.68□□□□□ -0.54
MARK3-208ENST00000554627 ZSCAN25Q6NSZ9 544 aa11.68□□□□□ -0.54
MARK3-208ENST00000554627 TMED8Q6PL24 325 aaPredicted RBP11.68□□□□□ -0.54
MARK3-208ENST00000554627 NIM1KQ8IY84 436 aa11.68□□□□□ -0.54
MARK3-208ENST00000554627 KBTBD3Q8NAB2 608 aa11.68□□□□□ -0.54
MARK3-208ENST00000554627 NFKBIEO00221 500 aa11.67□□□□□ -0.54
MARK3-208ENST00000554627 MAP4K4O95819 1239 aaPredicted RBP11.67□□□□□ -0.54
MARK3-208ENST00000554627 JDP2Q8WYK2 163 aa11.67□□□□□ -0.54
MARK3-208ENST00000554627 SNRKQ9NRH2 765 aa11.67□□□□□ -0.54
MARK3-208ENST00000554627 ZNF277Q9NRM2 450 aaPredicted RBP11.67□□□□□ -0.54
MARK3-208ENST00000554627 IQSEC3Q9UPP2 1182 aaPredicted RBP11.67□□□□□ -0.54
MARK3-208ENST00000554627 FAM205AQ6ZU69 1335 aa11.67□□□□□ -0.54
MARK3-208ENST00000554627 ZFYP08048 801 aaPredicted RBP11.67□□□□□ -0.54
MARK3-208ENST00000554627 MAP3K12Q12852 859 aa11.67□□□□□ -0.54
MARK3-208ENST00000554627 CHAF1AQ13111 956 aaPredicted RBP11.67□□□□□ -0.54
MARK3-208ENST00000554627 DBNDD1Q9H9R9 158 aa11.67□□□□□ -0.54
MARK3-208ENST00000554627 DIAPH3Q9NSV4 1193 aa11.67□□□□□ -0.54
MARK3-208ENST00000554627 COL4A5P29400 1685 aa11.66□□□□□ -0.54
MARK3-208ENST00000554627 GRIN3BO60391 1043 aa11.66□□□□□ -0.54
MARK3-208ENST00000554627 CYP2E1P05181 493 aaPredicted RBP11.66□□□□□ -0.54
MARK3-208ENST00000554627 FKBP1AP62942 108 aaKnown RBP11.66□□□□□ -0.54
MARK3-208ENST00000554627 DOK7Q18PE1 504 aa11.66□□□□□ -0.54
MARK3-208ENST00000554627 PI16Q6UXB8 463 aa11.66□□□□□ -0.54
MARK3-208ENST00000554627 ARHGAP27Q6ZUM4 889 aa11.66□□□□□ -0.54
MARK3-208ENST00000554627 RUFY2Q8WXA3 655 aa11.66□□□□□ -0.54
MARK3-208ENST00000554627 LRP2BPQ9P2M1 347 aa11.66□□□□□ -0.54
MARK3-208ENST00000554627 SUGT1Q9Y2Z0 365 aa11.66□□□□□ -0.54
MARK3-208ENST00000554627 MAST3O60307 1309 aa11.65□□□□□ -0.54
MARK3-208ENST00000554627 MYO3BQ8WXR4 1341 aa11.65□□□□□ -0.54
MARK3-208ENST00000554627 LAMA4Q16363 1823 aa11.65□□□□□ -0.54
MARK3-208ENST00000554627 USP17L3A6NCW0 530 aa11.65□□□□□ -0.54
MARK3-208ENST00000554627 USP17L4A6NCW7 530 aa11.65□□□□□ -0.54
MARK3-208ENST00000554627 IDH1O75874 414 aaKnown RBP11.65□□□□□ -0.54
MARK3-208ENST00000554627 LMNB1P20700 586 aa11.65□□□□□ -0.54
MARK3-208ENST00000554627 GPR162Q16538 588 aa11.65□□□□□ -0.54
MARK3-208ENST00000554627 STRIP1Q5VSL9 837 aa11.65□□□□□ -0.54
MARK3-208ENST00000554627 TTLL5Q6EMB2 1281 aa11.65□□□□□ -0.54
MARK3-208ENST00000554627 ERICH6Q7L0X2 663 aa11.65□□□□□ -0.54
MARK3-208ENST00000554627 USP17L1Q7RTZ2 530 aa11.65□□□□□ -0.54
MARK3-208ENST00000554627 FBXW7Q969H0 707 aa11.65□□□□□ -0.54
MARK3-208ENST00000554627 ABCF2Q9UG63 623 aa11.65□□□□□ -0.54
MARK3-208ENST00000554627 ZNRF3Q9ULT6 936 aa11.65□□□□□ -0.54
MARK3-208ENST00000554627 NDUFB9Q9Y6M9 179 aa11.65□□□□□ -0.54
MARK3-208ENST00000554627 NAV1Q8NEY1 1877 aa11.65□□□□□ -0.54
MARK3-208ENST00000554627 RAD50Q92878 1312 aa11.65□□□□□ -0.55
MARK3-208ENST00000554627 ADAMTSL1Q8N6G6 1762 aa11.64□□□□□ -0.55
MARK3-208ENST00000554627 LDHBP07195 334 aaKnown RBP11.64□□□□□ -0.55
MARK3-208ENST00000554627 YBX3P16989 372 aaKnown RBP eCLIP11.64□□□□□ -0.553e-7■□□□□ 9.4
MARK3-208ENST00000554627 GTF2IP78347 998 aa11.64□□□□□ -0.55
MARK3-208ENST00000554627 RASSF7Q02833 373 aa11.64□□□□□ -0.55
MARK3-208ENST00000554627 MFSD14BQ5SR56 506 aa11.64□□□□□ -0.55
MARK3-208ENST00000554627 SLF2Q8IX21 1173 aa11.64□□□□□ -0.55
MARK3-208ENST00000554627 EDC3Q96F86 508 aaKnown RBP11.64□□□□□ -0.55
MARK3-208ENST00000554627 ANTXR1Q9H6X2 564 aa11.64□□□□□ -0.55
MARK3-208ENST00000554627 LAMB1P07942 1786 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms