RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ZNF500O60304 480 aaPredicted RBP3.4□□□□□ -1.87
PRPF39-206ENST00000554429 RFX1P22670 979 aa3.4□□□□□ -1.87
PRPF39-206ENST00000554429 IL13P35225 146 aa3.4□□□□□ -1.87
PRPF39-206ENST00000554429 MMP14P50281 582 aa3.4□□□□□ -1.87
PRPF39-206ENST00000554429 DDR1Q08345 913 aa3.4□□□□□ -1.87
PRPF39-206ENST00000554429 DALRD3Q5D0E6 543 aaKnown RBP3.4□□□□□ -1.87
PRPF39-206ENST00000554429 AKAP4Q5JQC9 854 aa3.4□□□□□ -1.87
PRPF39-206ENST00000554429 CASC1Q6TDU7 716 aa3.4□□□□□ -1.87
PRPF39-206ENST00000554429 UBA5Q9GZZ9 404 aa3.4□□□□□ -1.87
PRPF39-206ENST00000554429 NARFQ9UHQ1 456 aa3.4□□□□□ -1.87
PRPF39-206ENST00000554429 G3BP2Q9UN86 482 aaKnown RBP3.4□□□□□ -1.87
PRPF39-206ENST00000554429 CACNA1SQ13698 1873 aa3.4□□□□□ -1.87
PRPF39-206ENST00000554429 DDX60Q8IY21 1712 aaKnown RBP3.4□□□□□ -1.87
PRPF39-206ENST00000554429 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.39□□□□□ -1.87
PRPF39-206ENST00000554429 KLRG2A4D1S0 409 aaPredicted RBP3.39□□□□□ -1.87
PRPF39-206ENST00000554429 FBLN1P23142 703 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 ARID4AP29374 1257 aaPredicted RBP3.39□□□□□ -1.87
PRPF39-206ENST00000554429 IRX3P78415 501 aaPredicted RBP3.39□□□□□ -1.87
PRPF39-206ENST00000554429 NAALADL2Q58DX5 795 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 C11orf96Q7Z7L8 435 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 SMC5Q8IY18 1101 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 SDR16C5Q8N3Y7 309 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 KRTAP4-7Q9BYR0 210 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 IBTKQ9P2D0 1353 aaPredicted RBP3.39□□□□□ -1.87
PRPF39-206ENST00000554429 LRRC37AA6NMS7 1700 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 SLX4Q8IY92 1834 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 A0A087WZG4 1122 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 GLTPD2A6NH11 291 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 STK25O00506 426 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 IRF6O14896 467 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 VSIG8P0DPA2 414 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 CYP19A1P11511 503 aaPredicted RBP3.39□□□□□ -1.87
PRPF39-206ENST00000554429 ZNF16P17020 682 aaPredicted RBP3.39□□□□□ -1.87
PRPF39-206ENST00000554429 CRKLP46109 303 aaKnown RBP3.39□□□□□ -1.87
PRPF39-206ENST00000554429 AXDND1Q5T1B0 1012 aaPredicted RBP3.39□□□□□ -1.87
PRPF39-206ENST00000554429 WDR78Q5VTH9 848 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 C9orf131Q5VYM1 1079 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 ZKSCAN2Q63HK3 967 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 FAN1Q9Y2M0 1017 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 COL15A1P39059 1388 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 CEMIPQ8WUJ3 1361 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 SRCAPQ6ZRS2 3230 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 PASKQ96RG2 1323 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 STK10O94804 968 aaKnown RBP3.39□□□□□ -1.87
PRPF39-206ENST00000554429 LMNB1P20700 586 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 BDNFP23560 247 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 RFC4P35249 363 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 SLC4A3P48751 1232 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 STYK1Q6J9G0 422 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 MAF1Q9H063 256 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 SLC52A2Q9HAB3 445 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 CHPF2Q9P2E5 772 aa3.39□□□□□ -1.87
PRPF39-206ENST00000554429 CTDP1Q9Y5B0 961 aaPredicted RBP3.39□□□□□ -1.87
PRPF39-206ENST00000554429 NUP98P52948 1817 aa3.38□□□□□ -1.87
PRPF39-206ENST00000554429 LAMB2P55268 1798 aa3.38□□□□□ -1.87
PRPF39-206ENST00000554429 A0A0G2JLW4 131 aa3.38□□□□□ -1.87
PRPF39-206ENST00000554429 FCHSD2O94868 740 aa3.38□□□□□ -1.87
PRPF39-206ENST00000554429 SCP2P22307 547 aa3.38□□□□□ -1.87
PRPF39-206ENST00000554429 CABP4P57796 275 aa3.38□□□□□ -1.87
PRPF39-206ENST00000554429 SOGA3Q5TF21 947 aa3.38□□□□□ -1.87
PRPF39-206ENST00000554429 LARGE2Q8N3Y3 721 aa3.38□□□□□ -1.87
PRPF39-206ENST00000554429 CXorf38Q8TB03 319 aa3.38□□□□□ -1.87
PRPF39-206ENST00000554429 TEX13AQ9BXU3 409 aaPredicted RBP3.38□□□□□ -1.87
PRPF39-206ENST00000554429 NMRK2Q9NPI5 230 aa3.38□□□□□ -1.87
PRPF39-206ENST00000554429 LTBP1Q14766 1721 aa3.38□□□□□ -1.87
PRPF39-206ENST00000554429 PSME4Q14997 1843 aa3.38□□□□□ -1.87
PRPF39-206ENST00000554429 hCG_2014768A0A024R1R8 64 aa3.38□□□□□ -1.87
PRPF39-206ENST00000554429 CCDC189A1A4V9 331 aa3.38□□□□□ -1.87
PRPF39-206ENST00000554429 RNMTO43148 476 aaKnown RBP3.38□□□□□ -1.87
PRPF39-206ENST00000554429 EIF5P55010 431 aaKnown RBP3.38□□□□□ -1.87
PRPF39-206ENST00000554429 NOM1Q5C9Z4 860 aaKnown RBP3.38□□□□□ -1.87
PRPF39-206ENST00000554429 EGFL6Q8IUX8 553 aa3.38□□□□□ -1.87
PRPF39-206ENST00000554429 GNL3LQ9NVN8 582 aaKnown RBP3.38□□□□□ -1.87
PRPF39-206ENST00000554429 MAGEC2Q9UBF1 373 aaPredicted RBP3.38□□□□□ -1.87
PRPF39-206ENST00000554429 PCDHGA10Q9Y5H3 936 aa3.38□□□□□ -1.87
PRPF39-206ENST00000554429 DLG5Q8TDM6 1919 aa3.38□□□□□ -1.87
PRPF39-206ENST00000554429 CNTNAP1P78357 1384 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 CARMIL3Q8ND23 1372 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 VEGFAP15692 232 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-206ENST00000554429 GYS2P54840 703 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 NBPF20Q3BBV1 942 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 GPAT2Q6NUI2 795 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 ZNF530Q6P9A1 599 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-206ENST00000554429 ARHGAP27Q6ZUM4 889 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 ZNF513Q8N8E2 541 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-206ENST00000554429 HELBQ8NG08 1087 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-206ENST00000554429 C7orf43Q8WVR3 580 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 BRIP1Q9BX63 1249 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.37□□□□□ -1.87
PRPF39-206ENST00000554429 WWC3Q9ULE0 1092 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 PRR12Q9ULL5 1215 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 BCS1LQ9Y276 419 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 ZNF330Q9Y3S2 320 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-206ENST00000554429 HEG1Q9ULI3 1381 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 NFKBIEO00221 500 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 MTHFSP49914 203 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 DDX10Q13206 875 aaKnown RBP3.37□□□□□ -1.87
PRPF39-206ENST00000554429 NFIXQ14938 502 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 C1orf141Q5JVX7 400 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 CCDC146Q8IYE0 955 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms