RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 FSHRP23945 695 aa9.45□□□□□ -0.9
ATXN3-224ENST00000554040 PDE6BP35913 854 aa9.45□□□□□ -0.9
ATXN3-224ENST00000554040 SCARF1Q14162 830 aa9.45□□□□□ -0.9
ATXN3-224ENST00000554040 EAPPQ56P03 285 aaPredicted RBP9.45□□□□□ -0.9
ATXN3-224ENST00000554040 C1orf141Q5JVX7 400 aa9.45□□□□□ -0.9
ATXN3-224ENST00000554040 PPP2R2DQ66LE6 453 aa9.45□□□□□ -0.9
ATXN3-224ENST00000554040 CNTROBQ8N137 903 aa9.45□□□□□ -0.9
ATXN3-224ENST00000554040 MEIOBQ8N635 442 aa9.45□□□□□ -0.9
ATXN3-224ENST00000554040 MAGEB6P1A0A0J9YX57 407 aa9.44□□□□□ -0.9
ATXN3-224ENST00000554040 CDCA8Q53HL2 280 aa9.44□□□□□ -0.9
ATXN3-224ENST00000554040 SOGA3Q5TF21 947 aa9.44□□□□□ -0.9
ATXN3-224ENST00000554040 BICDL1Q6ZP65 573 aa9.44□□□□□ -0.9
ATXN3-224ENST00000554040 GPKOWQ92917 476 aaPredicted RBP eCLIP9.44□□□□□ -0.9
ATXN3-224ENST00000554040 CNKSR1Q969H4 720 aa9.44□□□□□ -0.9
ATXN3-224ENST00000554040 OCSTAMPQ9BR26 566 aa9.44□□□□□ -0.9
ATXN3-224ENST00000554040 HACL1Q9UJ83 578 aa9.44□□□□□ -0.9
ATXN3-224ENST00000554040 ABT1Q9ULW3 272 aaKnown RBP9.44□□□□□ -0.9
ATXN3-224ENST00000554040 ZBTB1Q9Y2K1 713 aa9.44□□□□□ -0.9
ATXN3-224ENST00000554040 CARMIL3Q8ND23 1372 aa9.44□□□□□ -0.9
ATXN3-224ENST00000554040 COL5A3P25940 1745 aaPredicted RBP9.44□□□□□ -0.9
ATXN3-224ENST00000554040 EPHX2P34913 555 aa9.43□□□□□ -0.9
ATXN3-224ENST00000554040 MAP1SQ66K74 1059 aaPredicted RBP9.43□□□□□ -0.9
ATXN3-224ENST00000554040 PNMA8AQ86V59 439 aaPredicted RBP9.43□□□□□ -0.9
ATXN3-224ENST00000554040 COL15A1P39059 1388 aa9.42□□□□□ -0.9
ATXN3-224ENST00000554040 ECE1P42892 770 aa9.42□□□□□ -0.9
ATXN3-224ENST00000554040 C6orf118Q5T5N4 469 aa9.42□□□□□ -0.9
ATXN3-224ENST00000554040 TBC1D9BQ66K14 1250 aa9.42□□□□□ -0.9
ATXN3-224ENST00000554040 STYK1Q6J9G0 422 aa9.42□□□□□ -0.9
ATXN3-224ENST00000554040 PRR5LQ6MZQ0 368 aa9.42□□□□□ -0.9
ATXN3-224ENST00000554040 VASH1Q7L8A9 365 aaPredicted RBP9.42□□□□□ -0.9
ATXN3-224ENST00000554040 C7orf43Q8WVR3 580 aa9.42□□□□□ -0.9
ATXN3-224ENST00000554040 IRF7Q92985 503 aa9.42□□□□□ -0.9
ATXN3-224ENST00000554040 GPR101Q96P66 508 aaPredicted RBP9.42□□□□□ -0.9
ATXN3-224ENST00000554040 MCOLN1Q9GZU1 580 aa9.42□□□□□ -0.9
ATXN3-224ENST00000554040 DDX21Q9NR30 783 aaKnown RBP eCLIP9.42□□□□□ -0.9
ATXN3-224ENST00000554040 CCDC88AQ3V6T2 1871 aa9.41□□□□□ -0.9
ATXN3-224ENST00000554040 A0A087WZG4 1122 aa9.41□□□□□ -0.9
ATXN3-224ENST00000554040 SRGNP10124 158 aa9.41□□□□□ -0.9
ATXN3-224ENST00000554040 CANXP27824 592 aaKnown RBP9.41□□□□□ -0.9
ATXN3-224ENST00000554040 EIF5P55010 431 aaKnown RBP9.41□□□□□ -0.9
ATXN3-224ENST00000554040 SLC39A6Q13433 755 aa9.41□□□□□ -0.9
ATXN3-224ENST00000554040 NR6A1Q15406 480 aa9.41□□□□□ -0.9
ATXN3-224ENST00000554040 PRPF40BQ6NWY9 871 aaKnown RBP9.41□□□□□ -0.9
ATXN3-224ENST00000554040 PDXDC2PQ6P474 469 aa9.41□□□□□ -0.9
ATXN3-224ENST00000554040 LINC00528Q8N1L1 170 aa9.41□□□□□ -0.9
ATXN3-224ENST00000554040 MASTLQ96GX5 879 aa9.41□□□□□ -0.9
ATXN3-224ENST00000554040 CAPNS2Q96L46 248 aa9.41□□□□□ -0.9
ATXN3-224ENST00000554040 SLC52A2Q9HAB3 445 aa9.41□□□□□ -0.9
ATXN3-224ENST00000554040 FKBPLQ9UIM3 349 aa9.41□□□□□ -0.9
ATXN3-224ENST00000554040 ZNF541Q9H0D2 1346 aa9.4□□□□□ -0.9
ATXN3-224ENST00000554040 MAP2K2P36507 400 aa9.4□□□□□ -0.9
ATXN3-224ENST00000554040 TNNT2P45379 298 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-224ENST00000554040 CYP4F22Q6NT55 531 aa9.4□□□□□ -0.9
ATXN3-224ENST00000554040 AEBP1Q8IUX7 1158 aa9.4□□□□□ -0.9
ATXN3-224ENST00000554040 DDRGK1Q96HY6 314 aa9.4□□□□□ -0.9
ATXN3-224ENST00000554040 VIRMAQ69YN4 1812 aaKnown RBP9.4□□□□□ -0.91
ATXN3-224ENST00000554040 TIAM2Q8IVF5 1701 aa9.39□□□□□ -0.91
ATXN3-224ENST00000554040 NRXN2Q9P2S2 1712 aa9.39□□□□□ -0.91
ATXN3-224ENST00000554040 ADAMTS7Q9UKP4 1686 aa9.39□□□□□ -0.91
ATXN3-224ENST00000554040 FZD9O00144 591 aa9.39□□□□□ -0.91
ATXN3-224ENST00000554040 VSIG8P0DPA2 414 aa9.39□□□□□ -0.91
ATXN3-224ENST00000554040 CCDC93Q567U6 631 aa9.39□□□□□ -0.91
ATXN3-224ENST00000554040 AKAP4Q5JQC9 854 aa9.39□□□□□ -0.91
ATXN3-224ENST00000554040 CCDC116Q8IYX3 515 aa9.39□□□□□ -0.91
ATXN3-224ENST00000554040 EPS8L1Q8TE68 723 aa9.39□□□□□ -0.91
ATXN3-224ENST00000554040 LGR6Q9HBX8 967 aa9.39□□□□□ -0.91
ATXN3-224ENST00000554040 ZNF277Q9NRM2 450 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-224ENST00000554040 AFDNP55196 1824 aaKnown RBP9.38□□□□□ -0.91
ATXN3-224ENST00000554040 RNF123Q5XPI4 1314 aa9.38□□□□□ -0.91
ATXN3-224ENST00000554040 CA12O43570 354 aa9.38□□□□□ -0.91
ATXN3-224ENST00000554040 STARD3NLO95772 234 aa9.38□□□□□ -0.91
ATXN3-224ENST00000554040 FKBP4Q02790 459 aaKnown RBP eCLIP9.38□□□□□ -0.91
ATXN3-224ENST00000554040 GRM1Q13255 1194 aa9.38□□□□□ -0.91
ATXN3-224ENST00000554040 CST9Q5W186 159 aa9.38□□□□□ -0.91
ATXN3-224ENST00000554040 SULT6B1Q6IMI4 303 aa9.38□□□□□ -0.91
ATXN3-224ENST00000554040 CNBD1Q8NA66 436 aa9.38□□□□□ -0.91
ATXN3-224ENST00000554040 SETDB2Q96T68 719 aa9.38□□□□□ -0.91
ATXN3-224ENST00000554040 DNMT3LQ9UJW3 386 aa9.38□□□□□ -0.91
ATXN3-224ENST00000554040 DICER1Q9UPY3 1922 aaKnown RBP9.38□□□□□ -0.91
ATXN3-224ENST00000554040 FER1L6Q2WGJ9 1857 aa9.37□□□□□ -0.91
ATXN3-224ENST00000554040 RNMTO43148 476 aaKnown RBP9.37□□□□□ -0.91
ATXN3-224ENST00000554040 BMP2P12643 396 aa9.37□□□□□ -0.91
ATXN3-224ENST00000554040 ST5P78524 1137 aa9.37□□□□□ -0.91
ATXN3-224ENST00000554040 FMR1Q06787 632 aaKnown RBP eCLIP9.37□□□□□ -0.91
ATXN3-224ENST00000554040 DGKZQ13574 1117 aa9.37□□□□□ -0.91
ATXN3-224ENST00000554040 PPP1R26Q5T8A7 1209 aaPredicted RBP9.37□□□□□ -0.91
ATXN3-224ENST00000554040 RTKN2Q8IZC4 609 aa9.37□□□□□ -0.91
ATXN3-224ENST00000554040 GPC2Q8N158 579 aa9.37□□□□□ -0.91
ATXN3-224ENST00000554040 ARHGAP9Q9BRR9 750 aa9.37□□□□□ -0.91
ATXN3-224ENST00000554040 HMX1Q9NP08 348 aaPredicted RBP9.37□□□□□ -0.91
ATXN3-224ENST00000554040 TBC1D2BQ9UPU7 963 aa9.37□□□□□ -0.91
ATXN3-224ENST00000554040 SCN4AP35499 1836 aa9.37□□□□□ -0.91
ATXN3-224ENST00000554040 DLEC1Q9Y238 1755 aa9.37□□□□□ -0.91
ATXN3-224ENST00000554040 NPHP1O15259 732 aa9.36□□□□□ -0.91
ATXN3-224ENST00000554040 MAN1A2O60476 641 aa9.36□□□□□ -0.91
ATXN3-224ENST00000554040 AOC2O75106 756 aa9.36□□□□□ -0.91
ATXN3-224ENST00000554040 SYNE4Q8N205 404 aa9.36□□□□□ -0.91
ATXN3-224ENST00000554040 TJP1Q07157 1748 aa9.36□□□□□ -0.91
ATXN3-224ENST00000554040 TNRC18O15417 2968 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-224ENST00000554040 KLRG2A4D1S0 409 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms