RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 USP2O75604 605 aaPredicted RBP11.78□□□□□ -0.52
PRKCH-208ENST00000553846 GOLGA2Q08379 1002 aa11.78□□□□□ -0.52
PRKCH-208ENST00000553846 NBPF12Q5TAG4 269 aaPredicted RBP11.78□□□□□ -0.52
PRKCH-208ENST00000553846 TTLL5Q6EMB2 1281 aa11.78□□□□□ -0.52
PRKCH-208ENST00000553846 LEMD3Q9Y2U8 911 aa11.78□□□□□ -0.52
PRKCH-208ENST00000553846 SPDYE2BA6NHP3 402 aa11.77□□□□□ -0.53
PRKCH-208ENST00000553846 SPDYE6P0CI01 402 aa11.77□□□□□ -0.53
PRKCH-208ENST00000553846 BRI3BPQ8WY22 251 aa11.77□□□□□ -0.53
PRKCH-208ENST00000553846 SPTBN5Q9NRC6 3674 aaKnown RBP11.76□□□□□ -0.53
PRKCH-208ENST00000553846 GTF2IP78347 998 aa11.76□□□□□ -0.53
PRKCH-208ENST00000553846 C15orf52Q6ZUT6 534 aaKnown RBP11.76□□□□□ -0.53
PRKCH-208ENST00000553846 CCDC146Q8IYE0 955 aa11.76□□□□□ -0.53
PRKCH-208ENST00000553846 PRMT6Q96LA8 375 aaPredicted RBP11.76□□□□□ -0.53
PRKCH-208ENST00000553846 TEPSINQ96N21 525 aa11.76□□□□□ -0.53
PRKCH-208ENST00000553846 RBM27Q9P2N5 1060 aaKnown RBP11.76□□□□□ -0.53
PRKCH-208ENST00000553846 LAMA2P24043 3122 aaKnown RBP11.75□□□□□ -0.53
PRKCH-208ENST00000553846 PPP1R12BO60237 982 aaPredicted RBP11.75□□□□□ -0.53
PRKCH-208ENST00000553846 CASP7P55210 303 aa11.75□□□□□ -0.53
PRKCH-208ENST00000553846 DLGAP5Q15398 846 aa11.75□□□□□ -0.53
PRKCH-208ENST00000553846 SLC9C1Q4G0N8 1177 aa11.75□□□□□ -0.53
PRKCH-208ENST00000553846 CHRDL2Q6WN34 429 aa11.75□□□□□ -0.53
PRKCH-208ENST00000553846 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.75□□□□□ -0.53
PRKCH-208ENST00000553846 CDAN1Q8IWY9 1227 aa11.75□□□□□ -0.53
PRKCH-208ENST00000553846 ANKRD13AQ8IZ07 590 aa11.75□□□□□ -0.53
PRKCH-208ENST00000553846 CNKSR2Q8WXI2 1034 aa11.75□□□□□ -0.53
PRKCH-208ENST00000553846 FBXW7Q969H0 707 aa11.75□□□□□ -0.53
PRKCH-208ENST00000553846 OPTNQ96CV9 577 aa11.75□□□□□ -0.53
PRKCH-208ENST00000553846 PLA2G12BQ9BX93 195 aa11.75□□□□□ -0.53
PRKCH-208ENST00000553846 CD209Q9NNX6 404 aa11.75□□□□□ -0.53
PRKCH-208ENST00000553846 LAS1LQ9Y4W2 734 aaKnown RBP11.75□□□□□ -0.53
PRKCH-208ENST00000553846 CLRN2A0PK11 232 aa11.74□□□□□ -0.53
PRKCH-208ENST00000553846 SNAP23O00161 211 aa11.74□□□□□ -0.53
PRKCH-208ENST00000553846 RASA3Q14644 834 aa11.74□□□□□ -0.53
PRKCH-208ENST00000553846 NEUROD2Q15784 382 aa11.74□□□□□ -0.53
PRKCH-208ENST00000553846 SUPT20HL1Q3ZLR7 823 aa11.74□□□□□ -0.53
PRKCH-208ENST00000553846 FAM43AQ8N2R8 423 aa11.74□□□□□ -0.53
PRKCH-208ENST00000553846 RUNDC1Q96C34 613 aa11.74□□□□□ -0.53
PRKCH-208ENST00000553846 TMEM106CQ9BVX2 250 aa11.74□□□□□ -0.53
PRKCH-208ENST00000553846 ARHGAP39Q9C0H5 1083 aa11.74□□□□□ -0.53
PRKCH-208ENST00000553846 MAP3K2Q9Y2U5 619 aa11.74□□□□□ -0.53
PRKCH-208ENST00000553846 H7C1W4 665 aa11.73□□□□□ -0.53
PRKCH-208ENST00000553846 CSF1RP07333 972 aa11.73□□□□□ -0.53
PRKCH-208ENST00000553846 IL1R1P14778 569 aa11.73□□□□□ -0.53
PRKCH-208ENST00000553846 IREB2P48200 963 aaKnown RBP11.73□□□□□ -0.53
PRKCH-208ENST00000553846 FKBP1AP62942 108 aaKnown RBP11.73□□□□□ -0.53
PRKCH-208ENST00000553846 CFAP100Q494V2 611 aa11.73□□□□□ -0.53
PRKCH-208ENST00000553846 EYSQ5T1H1 3165 aa11.73□□□□□ -0.53
PRKCH-208ENST00000553846 OTUD7BQ6GQQ9 843 aa11.73□□□□□ -0.53
PRKCH-208ENST00000553846 C8orf58Q8NAV2 365 aa11.73□□□□□ -0.53
PRKCH-208ENST00000553846 SH3TC2Q8TF17 1288 aa11.73□□□□□ -0.53
PRKCH-208ENST00000553846 ADGRA2Q96PE1 1338 aa11.72□□□□□ -0.53
PRKCH-208ENST00000553846 NEURL1BA8MQ27 555 aa11.72□□□□□ -0.53
PRKCH-208ENST00000553846 CTGFP29279 349 aa11.72□□□□□ -0.53
PRKCH-208ENST00000553846 MAPK8IP2Q13387 824 aaPredicted RBP11.72□□□□□ -0.53
PRKCH-208ENST00000553846 VGLL4Q14135 290 aa11.72□□□□□ -0.53
PRKCH-208ENST00000553846 CWF19L2Q2TBE0 894 aaKnown RBP11.72□□□□□ -0.53
PRKCH-208ENST00000553846 SPDYE2Q495Y8 402 aa11.72□□□□□ -0.53
PRKCH-208ENST00000553846 NBPF11Q86T75 865 aa11.72□□□□□ -0.53
PRKCH-208ENST00000553846 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.72□□□□□ -0.53
PRKCH-208ENST00000553846 ANKRD2Q9GZV1 360 aa11.72□□□□□ -0.53
PRKCH-208ENST00000553846 ELP3Q9H9T3 547 aa11.72□□□□□ -0.53
PRKCH-208ENST00000553846 IFT57Q9NWB7 429 aa11.72□□□□□ -0.53
PRKCH-208ENST00000553846 ALPK3Q96L96 1907 aa11.71□□□□□ -0.53
PRKCH-208ENST00000553846 PI4KAP2A4QPH2 592 aa11.71□□□□□ -0.53
PRKCH-208ENST00000553846 DLL1O00548 723 aa11.71□□□□□ -0.53
PRKCH-208ENST00000553846 ITGA6P23229 1130 aa11.71□□□□□ -0.53
PRKCH-208ENST00000553846 LACTBP83111 547 aaPredicted RBP11.71□□□□□ -0.53
PRKCH-208ENST00000553846 CHRNDQ07001 517 aa11.71□□□□□ -0.53
PRKCH-208ENST00000553846 MTFR1Q15390 333 aa11.71□□□□□ -0.53
PRKCH-208ENST00000553846 TAF1CQ15572 869 aaPredicted RBP11.71□□□□□ -0.53
PRKCH-208ENST00000553846 KSR2Q6VAB6 950 aa11.71□□□□□ -0.53
PRKCH-208ENST00000553846 PI4KAP1Q8N8J0 262 aa11.71□□□□□ -0.53
PRKCH-208ENST00000553846 FAM205AQ6ZU69 1335 aa11.7□□□□□ -0.54
PRKCH-208ENST00000553846 CCL15-CCL14A0A0B4J2E2 113 aa11.7□□□□□ -0.54
PRKCH-208ENST00000553846 SOX1O00570 391 aaPredicted RBP11.7□□□□□ -0.54
PRKCH-208ENST00000553846 TLR2O60603 784 aa11.7□□□□□ -0.54
PRKCH-208ENST00000553846 RALBP1Q15311 655 aa11.7□□□□□ -0.54
PRKCH-208ENST00000553846 CCL15Q16663 113 aa11.7□□□□□ -0.54
PRKCH-208ENST00000553846 SLC4A8Q2Y0W8 1093 aa11.7□□□□□ -0.54
PRKCH-208ENST00000553846 UBE3BQ7Z3V4 1068 aa11.7□□□□□ -0.54
PRKCH-208ENST00000553846 TSPYL6Q8N831 410 aa11.7□□□□□ -0.54
PRKCH-208ENST00000553846 VEZTQ9HBM0 779 aa11.7□□□□□ -0.54
PRKCH-208ENST00000553846 ZFYVE28Q9HCC9 887 aa11.7□□□□□ -0.54
PRKCH-208ENST00000553846 ZCCHC17Q9NP64 241 aaKnown RBP11.7□□□□□ -0.54
PRKCH-208ENST00000553846 SNCAIPQ9Y6H5 919 aa11.7□□□□□ -0.54
PRKCH-208ENST00000553846 SPDYE5A6NIY4 337 aa11.69□□□□□ -0.54
PRKCH-208ENST00000553846 F8W031 263 aaPredicted RBP11.69□□□□□ -0.54
PRKCH-208ENST00000553846 ELL2O00472 640 aaPredicted RBP11.69□□□□□ -0.54
PRKCH-208ENST00000553846 DDX58O95786 925 aaKnown RBP11.69□□□□□ -0.54
PRKCH-208ENST00000553846 IGHMBP2P38935 993 aaKnown RBP11.69□□□□□ -0.54
PRKCH-208ENST00000553846 GTF2A2P52657 109 aa11.69□□□□□ -0.54
PRKCH-208ENST00000553846 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.69□□□□□ -0.54
PRKCH-208ENST00000553846 ZNF70Q9UC06 446 aaPredicted RBP11.69□□□□□ -0.54
PRKCH-208ENST00000553846 MUC3AQ02505 3323 aa11.68□□□□□ -0.54
PRKCH-208ENST00000553846 BTBD19C9JJ37 291 aa11.68□□□□□ -0.54
PRKCH-208ENST00000553846 MYO1BO43795 1136 aa11.68□□□□□ -0.54
PRKCH-208ENST00000553846 MYCP01106 439 aaPredicted RBP11.68□□□□□ -0.54
PRKCH-208ENST00000553846 GNRH1P01148 92 aa11.68□□□□□ -0.54
PRKCH-208ENST00000553846 GJA8P48165 433 aa11.68□□□□□ -0.54
PRKCH-208ENST00000553846 GCKRQ14397 625 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms