RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 MTERF4Q7Z6M4 381 aaKnown RBP8.12□□□□□ -1.11
LINC-ROR-201ENST00000553704 CCDC94Q9BW85 323 aaPredicted RBP8.12□□□□□ -1.11
LINC-ROR-201ENST00000553704 ME1P48163 572 aa8.12□□□□□ -1.11
LINC-ROR-201ENST00000553704 FAM160A1Q05DH4 1040 aa8.12□□□□□ -1.11
LINC-ROR-201ENST00000553704 CCDC73Q6ZRK6 1079 aa8.12□□□□□ -1.11
LINC-ROR-201ENST00000553704 CCDC191Q8NCU4 936 aa8.12□□□□□ -1.11
LINC-ROR-201ENST00000553704 PCDHA7Q9UN72 937 aa8.12□□□□□ -1.11
LINC-ROR-201ENST00000553704 HPS5Q9UPZ3 1129 aa8.12□□□□□ -1.11
LINC-ROR-201ENST00000553704 ZNF330Q9Y3S2 320 aaPredicted RBP8.12□□□□□ -1.11
LINC-ROR-201ENST00000553704 WDR17Q8IZU2 1322 aa8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 A0A1B0GVL5 298 aa8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 KIF28PB7ZC32 967 aa8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 CTIFO43310 598 aaKnown RBP8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 CIAO1O76071 339 aa8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 CDC25BP30305 580 aa8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 ZAP70P43403 619 aa8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 ATP2B3Q16720 1220 aa8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 SARM1Q6SZW1 724 aa8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 MB21D2Q8IYB1 491 aaPredicted RBP8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 SYNE4Q8N205 404 aa8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 AOPEPQ8N6M6 819 aa8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 ZNF274Q96GC6 653 aaPredicted RBP8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 XAGE2Q96GT9 111 aa8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 NBPF3Q9H094 633 aa8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 PUS7LQ9H0K6 701 aaKnown RBP8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 CLIC4Q9Y696 253 aa8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 GOLGA8BA8MQT2 603 aa8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 KINO60870 393 aaKnown RBP8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 NDUFA8P51970 172 aa8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 NAA30Q147X3 362 aaPredicted RBP8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 WASHC4Q2M389 1173 aa8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 TTC39AQ5SRH9 613 aa8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 FMR1NBQ8N0W7 255 aaPredicted RBP8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 ZCRB1Q8TBF4 217 aaKnown RBP8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 ISCA1Q9BUE6 129 aa8.11□□□□□ -1.11
LINC-ROR-201ENST00000553704 MROH7-TTC4A0A0A0MT08 1334 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 KLF18A0A0U1RQI7 1052 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 GOLGA6L19H0YKK7 550 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 PRC1O43663 620 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 FGAP02671 866 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 NCBP1Q09161 790 aaKnown RBP8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 CHAF1AQ13111 956 aaPredicted RBP8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 PPP4R3BQ5MIZ7 849 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 TOM1L2Q6ZVM7 507 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 ANKRD7Q92527 254 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 FAM89AQ96GI7 184 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 ZNF396Q96N95 335 aaPredicted RBP8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 BCL11BQ9C0K0 894 aaPredicted RBP8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 MYH3P11055 1940 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 ANKRD36CQ5JPF3 1778 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 POLR3DP05423 398 aaPredicted RBP8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 TNNT1P13805 278 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 EVCP57679 992 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 CCZ1BP86790 482 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 CCZ1P86791 482 aaPredicted RBP8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 DPCR1Q3MIW9 517 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 LRRC8AQ8IWT6 810 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 LINC00301Q8NCQ3 95 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 MRPS27Q92552 414 aaKnown RBP8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 MRFAP1L1Q96HT8 127 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 PKNOX2Q96KN3 472 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 AIFM3Q96NN9 605 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 PRDM11Q9NQV5 511 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 CEP126Q9P2H0 1117 aa8.1□□□□□ -1.11
LINC-ROR-201ENST00000553704 CTAGE5O15320 804 aa8.09□□□□□ -1.11
LINC-ROR-201ENST00000553704 CCDC57Q2TAC2 916 aa8.09□□□□□ -1.11
LINC-ROR-201ENST00000553704 NBPF11Q86T75 865 aa8.09□□□□□ -1.11
LINC-ROR-201ENST00000553704 RTEL1Q9NZ71 1219 aa8.09□□□□□ -1.11
LINC-ROR-201ENST00000553704 ITGB4P16144 1822 aa8.09□□□□□ -1.11
LINC-ROR-201ENST00000553704 CHD4Q14839 1912 aa8.09□□□□□ -1.11
LINC-ROR-201ENST00000553704 CCDC69A6NI79 296 aa8.09□□□□□ -1.11
LINC-ROR-201ENST00000553704 ERVV-2B6SEH9 535 aa8.09□□□□□ -1.11
LINC-ROR-201ENST00000553704 GPAA1O43292 621 aa8.09□□□□□ -1.11
LINC-ROR-201ENST00000553704 RXRAP19793 462 aa8.09□□□□□ -1.11
LINC-ROR-201ENST00000553704 U2AF2P26368 475 aaKnown RBP eCLIP8.09□□□□□ -1.11
LINC-ROR-201ENST00000553704 MCAMP43121 646 aa8.09□□□□□ -1.11
LINC-ROR-201ENST00000553704 GORABQ5T7V8 394 aa8.09□□□□□ -1.11
LINC-ROR-201ENST00000553704 FILIP1Q7Z7B0 1213 aa8.09□□□□□ -1.11
LINC-ROR-201ENST00000553704 TBC1D10CQ8IV04 446 aa8.09□□□□□ -1.11
LINC-ROR-201ENST00000553704 FBXL16Q8N461 479 aa8.09□□□□□ -1.11
LINC-ROR-201ENST00000553704 C8orf76Q96K31 380 aa8.09□□□□□ -1.11
LINC-ROR-201ENST00000553704 SENP2Q9HC62 589 aa8.09□□□□□ -1.11
LINC-ROR-201ENST00000553704 ATG3Q9NT62 314 aa8.09□□□□□ -1.11
LINC-ROR-201ENST00000553704 NHSL1Q5SYE7 1610 aa8.08□□□□□ -1.12
LINC-ROR-201ENST00000553704 SMTNL1A8MU46 457 aa8.08□□□□□ -1.12
LINC-ROR-201ENST00000553704 BECN2A8MW95 431 aa8.08□□□□□ -1.12
LINC-ROR-201ENST00000553704 CAVIN2O95810 425 aa8.08□□□□□ -1.12
LINC-ROR-201ENST00000553704 CBX1P83916 185 aa8.08□□□□□ -1.12
LINC-ROR-201ENST00000553704 TCIRG1Q13488 830 aa8.08□□□□□ -1.12
LINC-ROR-201ENST00000553704 STK38Q15208 465 aa8.08□□□□□ -1.12
LINC-ROR-201ENST00000553704 TPD52L1Q16890 204 aaPredicted RBP8.08□□□□□ -1.12
LINC-ROR-201ENST00000553704 IMMTQ16891 758 aaKnown RBP8.08□□□□□ -1.12
LINC-ROR-201ENST00000553704 CCDC158Q5M9N0 1113 aa8.08□□□□□ -1.12
LINC-ROR-201ENST00000553704 MYSM1Q5VVJ2 828 aa8.08□□□□□ -1.12
LINC-ROR-201ENST00000553704 BRINP3Q76B58 766 aa8.08□□□□□ -1.12
LINC-ROR-201ENST00000553704 PDCL2Q8N4E4 241 aa8.08□□□□□ -1.12
LINC-ROR-201ENST00000553704 APPBP2Q92624 585 aa8.08□□□□□ -1.12
LINC-ROR-201ENST00000553704 ANO10Q9NW15 660 aa8.08□□□□□ -1.12
LINC-ROR-201ENST00000553704 ORC3Q9UBD5 711 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms