RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 C15orf52Q6ZUT6 534 aaKnown RBP11.86□□□□□ -0.51
CHD8-204ENST00000553622 LARGE2Q8N3Y3 721 aa11.86□□□□□ -0.51
CHD8-204ENST00000553622 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.86□□□□□ -0.51
CHD8-204ENST00000553622 RTFDC1Q9BY42 306 aaPredicted RBP11.86□□□□□ -0.51
CHD8-204ENST00000553622 DBNDD1Q9H9R9 158 aa11.86□□□□□ -0.51
CHD8-204ENST00000553622 CD209Q9NNX6 404 aa11.86□□□□□ -0.51
CHD8-204ENST00000553622 HMG20BQ9P0W2 317 aa11.86□□□□□ -0.51
CHD8-204ENST00000553622 DENND2AQ9ULE3 1009 aa11.86□□□□□ -0.51
CHD8-204ENST00000553622 SNED1Q8TER0 1413 aa11.86□□□□□ -0.51
CHD8-204ENST00000553622 MAST2Q6P0Q8 1798 aa11.85□□□□□ -0.51
CHD8-204ENST00000553622 COL1A1P02452 1464 aaPredicted RBP11.85□□□□□ -0.51
CHD8-204ENST00000553622 GPR162Q16538 588 aa11.85□□□□□ -0.51
CHD8-204ENST00000553622 EVI5LQ96CN4 794 aa11.85□□□□□ -0.51
CHD8-204ENST00000553622 ZNF512BQ96KM6 892 aaPredicted RBP11.85□□□□□ -0.51
CHD8-204ENST00000553622 PSMD1Q99460 953 aa11.85□□□□□ -0.51
CHD8-204ENST00000553622 COA1Q9GZY4 146 aa11.85□□□□□ -0.51
CHD8-204ENST00000553622 SEMA3EO15041 775 aa11.84□□□□□ -0.51
CHD8-204ENST00000553622 ECE2O60344 883 aa11.84□□□□□ -0.51
CHD8-204ENST00000553622 CDC45O75419 566 aa11.84□□□□□ -0.51
CHD8-204ENST00000553622 IDH1O75874 414 aaKnown RBP11.84□□□□□ -0.51
CHD8-204ENST00000553622 IARSP41252 1262 aaKnown RBP11.84□□□□□ -0.51
CHD8-204ENST00000553622 KIAA2012Q0VF49 1180 aa11.84□□□□□ -0.51
CHD8-204ENST00000553622 CASC1Q6TDU7 716 aa11.84□□□□□ -0.51
CHD8-204ENST00000553622 TBC1D9Q6ZT07 1266 aa11.84□□□□□ -0.51
CHD8-204ENST00000553622 NIM1KQ8IY84 436 aa11.84□□□□□ -0.51
CHD8-204ENST00000553622 TDRD7Q8NHU6 1098 aaKnown RBP11.84□□□□□ -0.51
CHD8-204ENST00000553622 ANTXR1Q9H6X2 564 aa11.84□□□□□ -0.51
CHD8-204ENST00000553622 ABCF2Q9UG63 623 aa11.84□□□□□ -0.51
CHD8-204ENST00000553622 TIAM2Q8IVF5 1701 aa11.83□□□□□ -0.52
CHD8-204ENST00000553622 NFKBIEO00221 500 aa11.83□□□□□ -0.52
CHD8-204ENST00000553622 CYP2E1P05181 493 aaPredicted RBP11.83□□□□□ -0.52
CHD8-204ENST00000553622 IL1R1P14778 569 aa11.83□□□□□ -0.52
CHD8-204ENST00000553622 YBX3P16989 372 aaKnown RBP eCLIP11.83□□□□□ -0.52
CHD8-204ENST00000553622 GTF2IP78347 998 aa11.83□□□□□ -0.52
CHD8-204ENST00000553622 TTF1Q15361 905 aaPredicted RBP11.83□□□□□ -0.52
CHD8-204ENST00000553622 PIH1D3Q9NQM4 214 aaKnown RBP11.83□□□□□ -0.52
CHD8-204ENST00000553622 DIAPH3Q9NSV4 1193 aa11.83□□□□□ -0.52
CHD8-204ENST00000553622 RAI14Q9P0K7 980 aa11.83□□□□□ -0.52
CHD8-204ENST00000553622 LRP2BPQ9P2M1 347 aa11.83□□□□□ -0.52
CHD8-204ENST00000553622 ZNF646O15015 1829 aaPredicted RBP11.83□□□□□ -0.52
CHD8-204ENST00000553622 KBTBD3Q8NAB2 608 aa11.82□□□□□ -0.52
CHD8-204ENST00000553622 WDR66Q8TBY9 1149 aa11.82□□□□□ -0.52
CHD8-204ENST00000553622 JDP2Q8WYK2 163 aa11.82□□□□□ -0.52
CHD8-204ENST00000553622 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.82□□□□□ -0.52
CHD8-204ENST00000553622 COL4A5P29400 1685 aa11.81□□□□□ -0.52
CHD8-204ENST00000553622 MAP3K12Q12852 859 aa11.81□□□□□ -0.52
CHD8-204ENST00000553622 LRRFIP1Q32MZ4 808 aaKnown RBP11.81□□□□□ -0.52
CHD8-204ENST00000553622 TTLL5Q6EMB2 1281 aa11.81□□□□□ -0.52
CHD8-204ENST00000553622 ERICH6Q7L0X2 663 aa11.81□□□□□ -0.52
CHD8-204ENST00000553622 PODNQ7Z5L7 613 aa11.81□□□□□ -0.52
CHD8-204ENST00000553622 ZGPATQ8N5A5 531 aaKnown RBP11.81□□□□□ -0.52
CHD8-204ENST00000553622 LTBP3Q9NS15 1303 aa11.81□□□□□ -0.52
CHD8-204ENST00000553622 ADAMTSL1Q8N6G6 1762 aa11.8□□□□□ -0.52
CHD8-204ENST00000553622 HIP1O00291 1037 aa11.8□□□□□ -0.52
CHD8-204ENST00000553622 RAD17O75943 681 aa11.8□□□□□ -0.52
CHD8-204ENST00000553622 LDHBP07195 334 aaKnown RBP11.8□□□□□ -0.52
CHD8-204ENST00000553622 MFSD14BQ5SR56 506 aa11.8□□□□□ -0.52
CHD8-204ENST00000553622 SPTY2D1Q68D10 685 aaPredicted RBP11.8□□□□□ -0.52
CHD8-204ENST00000553622 CWC27Q6UX04 472 aaKnown RBP11.8□□□□□ -0.52
CHD8-204ENST00000553622 DZIP1Q86YF9 867 aaKnown RBP11.8□□□□□ -0.52
CHD8-204ENST00000553622 MAGEB6Q8N7X4 407 aa11.8□□□□□ -0.52
CHD8-204ENST00000553622 MXD3Q9BW11 206 aa11.8□□□□□ -0.52
CHD8-204ENST00000553622 VPS33BQ9H267 617 aa11.8□□□□□ -0.52
CHD8-204ENST00000553622 KCNQ5Q9NR82 932 aa11.8□□□□□ -0.52
CHD8-204ENST00000553622 PDS5AQ29RF7 1337 aaKnown RBP11.8□□□□□ -0.52
CHD8-204ENST00000553622 USP17L3A6NCW0 530 aa11.79□□□□□ -0.52
CHD8-204ENST00000553622 USP17L4A6NCW7 530 aa11.79□□□□□ -0.52
CHD8-204ENST00000553622 YDJCA8MPS7 323 aa11.79□□□□□ -0.52
CHD8-204ENST00000553622 F8W031 263 aaPredicted RBP11.79□□□□□ -0.52
CHD8-204ENST00000553622 RNF113AO15541 343 aaKnown RBP11.79□□□□□ -0.52
CHD8-204ENST00000553622 CHGBP05060 677 aa11.79□□□□□ -0.52
CHD8-204ENST00000553622 CHMLP26374 656 aa11.79□□□□□ -0.52
CHD8-204ENST00000553622 NMIQ13287 307 aaPredicted RBP11.79□□□□□ -0.52
CHD8-204ENST00000553622 SLFNL1Q499Z3 407 aa11.79□□□□□ -0.52
CHD8-204ENST00000553622 C8orf34Q49A92 452 aa11.79□□□□□ -0.52
CHD8-204ENST00000553622 SLC9C2Q5TAH2 1124 aa11.79□□□□□ -0.52
CHD8-204ENST00000553622 ZSCAN25Q6NSZ9 544 aa11.79□□□□□ -0.52
CHD8-204ENST00000553622 USP17L1Q7RTZ2 530 aa11.79□□□□□ -0.52
CHD8-204ENST00000553622 TBC1D22AQ8WUA7 517 aa11.79□□□□□ -0.52
CHD8-204ENST00000553622 RUFY2Q8WXA3 655 aa11.79□□□□□ -0.52
CHD8-204ENST00000553622 ZNRF3Q9ULT6 936 aa11.79□□□□□ -0.52
CHD8-204ENST00000553622 FAM205AQ6ZU69 1335 aa11.79□□□□□ -0.52
CHD8-204ENST00000553622 ECM29Q5VYK3 1845 aa11.79□□□□□ -0.52
CHD8-204ENST00000553622 CDK5RAP2Q96SN8 1893 aa11.78□□□□□ -0.52
CHD8-204ENST00000553622 ZFYP08048 801 aaPredicted RBP11.78□□□□□ -0.52
CHD8-204ENST00000553622 PDE6AP16499 860 aa11.78□□□□□ -0.52
CHD8-204ENST00000553622 LMNB1P20700 586 aa11.78□□□□□ -0.52
CHD8-204ENST00000553622 PRDX5P30044 214 aa11.78□□□□□ -0.52
CHD8-204ENST00000553622 NAA16Q6N069 864 aaPredicted RBP11.78□□□□□ -0.52
CHD8-204ENST00000553622 FAM227BQ96M60 508 aa11.78□□□□□ -0.52
CHD8-204ENST00000553622 RNF181Q9P0P0 153 aa11.78□□□□□ -0.52
CHD8-204ENST00000553622 ZNF532Q9HCE3 1301 aa11.78□□□□□ -0.52
CHD8-204ENST00000553622 RFX7Q2KHR2 1363 aa11.78□□□□□ -0.52
CHD8-204ENST00000553622 BAZ2AQ9UIF9 1905 aaKnown RBP11.78□□□□□ -0.52
CHD8-204ENST00000553622 A0A0D9SFI3 127 aa11.77□□□□□ -0.53
CHD8-204ENST00000553622 CYP7A1P22680 504 aa11.77□□□□□ -0.53
CHD8-204ENST00000553622 ADD2P35612 726 aa11.77□□□□□ -0.53
CHD8-204ENST00000553622 PRELPP51888 382 aa11.77□□□□□ -0.53
CHD8-204ENST00000553622 MFAP1P55081 439 aaKnown RBP11.77□□□□□ -0.53
CHD8-204ENST00000553622 EIF6P56537 245 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms