RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 VPS37CA5D8V6 355 aaPredicted RBP10.79□□□□□ -0.68
RAB3IP-218ENST00000553099 E7EWF7 191 aa10.79□□□□□ -0.68
RAB3IP-218ENST00000553099 APPP05067 770 aa10.79□□□□□ -0.68
RAB3IP-218ENST00000553099 FAM196AQ6ZSG2 479 aa10.79□□□□□ -0.68
RAB3IP-218ENST00000553099 CHST3Q7LGC8 479 aa10.79□□□□□ -0.68
RAB3IP-218ENST00000553099 GOLGA6L3A6NEY3 463 aa10.78□□□□□ -0.68
RAB3IP-218ENST00000553099 IMMTQ16891 758 aaKnown RBP10.78□□□□□ -0.68
RAB3IP-218ENST00000553099 KLHL40Q2TBA0 621 aa10.78□□□□□ -0.68
RAB3IP-218ENST00000553099 PIAS4Q8N2W9 510 aaPredicted RBP10.78□□□□□ -0.68
RAB3IP-218ENST00000553099 CELF1Q92879 486 aaKnown RBP10.78□□□□□ -0.68
RAB3IP-218ENST00000553099 NLRP3Q96P20 1036 aa10.78□□□□□ -0.68
RAB3IP-218ENST00000553099 GDPD2Q9HCC8 539 aa10.78□□□□□ -0.68
RAB3IP-218ENST00000553099 A0A1B0GUL6 1792 aa10.78□□□□□ -0.68
RAB3IP-218ENST00000553099 BRWD3Q6RI45 1802 aa10.78□□□□□ -0.68
RAB3IP-218ENST00000553099 FGAP02671 866 aa10.78□□□□□ -0.68
RAB3IP-218ENST00000553099 HMGB1P09429 215 aaKnown RBP10.78□□□□□ -0.68
RAB3IP-218ENST00000553099 PDE6AP16499 860 aa10.78□□□□□ -0.68
RAB3IP-218ENST00000553099 SF3B3Q15393 1217 aaKnown RBP10.78□□□□□ -0.68
RAB3IP-218ENST00000553099 COL24A1Q17RW2 1714 aa10.78□□□□□ -0.68
RAB3IP-218ENST00000553099 TPRNQ4KMQ1 711 aa10.78□□□□□ -0.68
RAB3IP-218ENST00000553099 TRAPPC3LQ5T215 181 aa10.78□□□□□ -0.68
RAB3IP-218ENST00000553099 TPTE2Q6XPS3 522 aa10.78□□□□□ -0.68
RAB3IP-218ENST00000553099 CTNNA3Q9UI47 895 aa10.78□□□□□ -0.68
RAB3IP-218ENST00000553099 DOCK2Q92608 1830 aa10.77□□□□□ -0.68
RAB3IP-218ENST00000553099 FOXP2O15409 715 aa10.77□□□□□ -0.69
RAB3IP-218ENST00000553099 ONECUT3O60422 494 aaPredicted RBP10.77□□□□□ -0.69
RAB3IP-218ENST00000553099 ZSCAN22P10073 491 aaPredicted RBP10.77□□□□□ -0.69
RAB3IP-218ENST00000553099 CAVIN1Q6NZI2 390 aaKnown RBP10.77□□□□□ -0.69
RAB3IP-218ENST00000553099 DHX32Q7L7V1 743 aaKnown RBP10.77□□□□□ -0.69
RAB3IP-218ENST00000553099 MAGEB6Q8N7X4 407 aa10.77□□□□□ -0.69
RAB3IP-218ENST00000553099 AIDAQ96BJ3 306 aa10.77□□□□□ -0.69
RAB3IP-218ENST00000553099 LRRC4BQ9NT99 713 aa10.77□□□□□ -0.69
RAB3IP-218ENST00000553099 WTIPA6NIX2 430 aaPredicted RBP10.77□□□□□ -0.69
RAB3IP-218ENST00000553099 GYG1P46976 350 aa10.77□□□□□ -0.69
RAB3IP-218ENST00000553099 MAP3K12Q12852 859 aa10.77□□□□□ -0.69
RAB3IP-218ENST00000553099 VPS37DQ86XT2 251 aa10.77□□□□□ -0.69
RAB3IP-218ENST00000553099 BCL11BQ9C0K0 894 aaPredicted RBP10.77□□□□□ -0.69
RAB3IP-218ENST00000553099 ALDH8A1Q9H2A2 487 aaPredicted RBP10.77□□□□□ -0.69
RAB3IP-218ENST00000553099 APOBRQ0VD83 1088 aa10.76□□□□□ -0.69
RAB3IP-218ENST00000553099 UBE3CQ15386 1083 aa10.76□□□□□ -0.69
RAB3IP-218ENST00000553099 LARP1BQ659C4 914 aaKnown RBP10.76□□□□□ -0.69
RAB3IP-218ENST00000553099 BSDC1Q9NW68 430 aaPredicted RBP10.76□□□□□ -0.69
RAB3IP-218ENST00000553099 ZNF213O14771 459 aa10.76□□□□□ -0.69
RAB3IP-218ENST00000553099 TRIM37O94972 964 aa10.76□□□□□ -0.69
RAB3IP-218ENST00000553099 F13A1P00488 732 aa10.76□□□□□ -0.69
RAB3IP-218ENST00000553099 LRP2BPQ9P2M1 347 aa10.76□□□□□ -0.69
RAB3IP-218ENST00000553099 ABCF2Q9UG63 623 aa10.76□□□□□ -0.69
RAB3IP-218ENST00000553099 MYH13Q9UKX3 1938 aa10.76□□□□□ -0.69
RAB3IP-218ENST00000553099 L1TD1Q5T7N2 865 aaKnown RBP10.75□□□□□ -0.69
RAB3IP-218ENST00000553099 GTF3C6Q969F1 213 aa10.75□□□□□ -0.69
RAB3IP-218ENST00000553099 MINPP1Q9UNW1 487 aa10.75□□□□□ -0.69
RAB3IP-218ENST00000553099 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.75□□□□□ -0.69
RAB3IP-218ENST00000553099 RPS8P62241 208 aaKnown RBP10.75□□□□□ -0.69
RAB3IP-218ENST00000553099 SLC10A5Q5PT55 438 aa10.75□□□□□ -0.69
RAB3IP-218ENST00000553099 KRT27Q7Z3Y8 459 aa10.75□□□□□ -0.69
RAB3IP-218ENST00000553099 RALYLQ86SE5 291 aaKnown RBP10.75□□□□□ -0.69
RAB3IP-218ENST00000553099 GPT2Q8TD30 523 aa10.75□□□□□ -0.69
RAB3IP-218ENST00000553099 CHD4Q14839 1912 aa10.75□□□□□ -0.69
RAB3IP-218ENST00000553099 UBR3Q6ZT12 1888 aa10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 RGL2O15211 777 aa10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 JAK2O60674 1132 aa10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 MBD4O95243 580 aa10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 CCT2P78371 535 aaKnown RBP10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 CAVIN4Q5BKX8 364 aa10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 FERMT3Q86UX7 667 aa10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 DDX11Q96FC9 970 aa10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 MTMR6Q9Y217 621 aa10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 CNPY2Q9Y2B0 182 aa10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 ATP6V1DQ9Y5K8 247 aa10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 TNRC6CQ9HCJ0 1690 aaKnown RBP10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 TCRBV5S4A2TA0A5A2 114 aa10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 FIBPO43427 364 aa10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 PPFIA3O75145 1194 aa10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 SCRN1Q12765 414 aa10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 UBE4AQ14139 1066 aa10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 NFIXQ14938 502 aa10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 CDC37L1Q7L3B6 337 aa10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 CNBD1Q8NA66 436 aa10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 ARMT1Q9H993 441 aa10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 GNL3LQ9NVN8 582 aaKnown RBP10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 RBM27Q9P2N5 1060 aaKnown RBP10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 NSFL1CQ9UNZ2 370 aaKnown RBP10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 CARMIL3Q8ND23 1372 aa10.74□□□□□ -0.69
RAB3IP-218ENST00000553099 PDCP20941 246 aa10.73□□□□□ -0.69
RAB3IP-218ENST00000553099 EXOSC10Q01780 885 aaKnown RBP10.73□□□□□ -0.69
RAB3IP-218ENST00000553099 MIGA1Q8NAN2 632 aa10.73□□□□□ -0.69
RAB3IP-218ENST00000553099 NCOA7Q8NI08 942 aa10.73□□□□□ -0.69
RAB3IP-218ENST00000553099 RAI14Q9P0K7 980 aa10.73□□□□□ -0.69
RAB3IP-218ENST00000553099 BRPF3Q9ULD4 1205 aa10.73□□□□□ -0.69
RAB3IP-218ENST00000553099 KLRK1P26718 216 aa10.73□□□□□ -0.69
RAB3IP-218ENST00000553099 FOSBP53539 338 aa10.73□□□□□ -0.69
RAB3IP-218ENST00000553099 TRDNQ13061 729 aa10.73□□□□□ -0.69
RAB3IP-218ENST00000553099 USP48Q86UV5 1035 aa10.73□□□□□ -0.69
RAB3IP-218ENST00000553099 NCOA5Q9HCD5 579 aaKnown RBP10.73□□□□□ -0.69
RAB3IP-218ENST00000553099 GPHNQ9NQX3 736 aaPredicted RBP10.73□□□□□ -0.69
RAB3IP-218ENST00000553099 FSD2A1L4K1 749 aa10.72□□□□□ -0.69
RAB3IP-218ENST00000553099 PRC1O43663 620 aa10.72□□□□□ -0.69
RAB3IP-218ENST00000553099 MCM5P33992 734 aa10.72□□□□□ -0.69
RAB3IP-218ENST00000553099 FAM184AQ8NB25 1140 aa10.72□□□□□ -0.69
RAB3IP-218ENST00000553099 STRBPQ96SI9 672 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms