RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 BCL9O00512 1426 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 ARAP2Q8WZ64 1704 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 U2AF2P26368 475 aaKnown RBP eCLIP8.6□□□□□ -1.03
BEST3-212ENST00000553096 NECTIN1Q15223 517 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 ADCK5Q3MIX3 580 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 ZSCAN25Q6NSZ9 544 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 LMBR1LQ6UX01 489 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 ATG9AQ7Z3C6 839 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 ATG3Q9NT62 314 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 TRPC5Q9UL62 973 aaPredicted RBP8.6□□□□□ -1.03
BEST3-212ENST00000553096 ZNF609O15014 1411 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 ME3Q16798 604 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 ANO6Q4KMQ2 910 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 BANK1Q8NDB2 785 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 TAF6LQ9Y6J9 622 aa8.6□□□□□ -1.03
BEST3-212ENST00000553096 A0A1B0GUL6 1792 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 LAMB2P55268 1798 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 MYH15Q9Y2K3 1946 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 BCORQ6W2J9 1755 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.59□□□□□ -1.03
BEST3-212ENST00000553096 LOC102724159A0A0B4J2E5 919 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 SPDYE4A6NLX3 237 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 FAM177BA6PVY3 158 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 KIF2AO00139 706 aaPredicted RBP8.59□□□□□ -1.03
BEST3-212ENST00000553096 CTAGE5O15320 804 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 KCNJ4P48050 445 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 PWP2Q15269 919 aaKnown RBP8.59□□□□□ -1.03
BEST3-212ENST00000553096 TPD52L1Q16890 204 aaPredicted RBP8.59□□□□□ -1.03
BEST3-212ENST00000553096 SARM1Q6SZW1 724 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 ZNF589Q86UQ0 364 aaPredicted RBP8.59□□□□□ -1.03
BEST3-212ENST00000553096 LUZP1Q86V48 1076 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 CREBRFQ8IUR6 639 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 DNAJC10Q8IXB1 793 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 YY1AP1Q9H869 796 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 DACT1Q9NYF0 836 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 TMOD3Q9NYL9 352 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 HMG20BQ9P0W2 317 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 CTNNA3Q9UI47 895 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 LIG1P18858 919 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 RBM6P78332 1123 aaKnown RBP8.59□□□□□ -1.03
BEST3-212ENST00000553096 DHX8Q14562 1220 aaKnown RBP8.59□□□□□ -1.03
BEST3-212ENST00000553096 CREB3L3Q68CJ9 461 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 DBNDD2Q9BQY9 259 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 LARP6Q9BRS8 491 aaKnown RBP8.59□□□□□ -1.03
BEST3-212ENST00000553096 CWC25Q9NXE8 425 aaPredicted RBP8.59□□□□□ -1.03
BEST3-212ENST00000553096 CLIP2Q9UDT6 1046 aa8.59□□□□□ -1.03
BEST3-212ENST00000553096 LRP5O75197 1615 aa8.58□□□□□ -1.04
BEST3-212ENST00000553096 GOLGA6L19H0YKK7 550 aa8.58□□□□□ -1.04
BEST3-212ENST00000553096 ZNF165P49910 485 aa8.58□□□□□ -1.04
BEST3-212ENST00000553096 BLOC1S2Q6QNY1 142 aa8.58□□□□□ -1.04
BEST3-212ENST00000553096 MAP4K1Q92918 833 aa8.58□□□□□ -1.04
BEST3-212ENST00000553096 MRFAP1L1Q96HT8 127 aa8.58□□□□□ -1.04
BEST3-212ENST00000553096 ZNF594Q96JF6 807 aaPredicted RBP8.58□□□□□ -1.04
BEST3-212ENST00000553096 GJD4Q96KN9 370 aaPredicted RBP8.58□□□□□ -1.04
BEST3-212ENST00000553096 C16orf45Q96MC5 204 aaPredicted RBP8.58□□□□□ -1.04
BEST3-212ENST00000553096 ISCA1Q9BUE6 129 aa8.58□□□□□ -1.04
BEST3-212ENST00000553096 DDX41Q9UJV9 622 aaKnown RBP8.58□□□□□ -1.04
BEST3-212ENST00000553096 RBM8AQ9Y5S9 174 aaKnown RBP8.58□□□□□ -1.04
BEST3-212ENST00000553096 SRCAPQ6ZRS2 3230 aa8.58□□□□□ -1.04
BEST3-212ENST00000553096 A0A0G2JS52 829 aa8.58□□□□□ -1.04
BEST3-212ENST00000553096 ST3GAL1Q11201 340 aa8.58□□□□□ -1.04
BEST3-212ENST00000553096 LRRC24Q50LG9 513 aa8.58□□□□□ -1.04
BEST3-212ENST00000553096 CEP135Q66GS9 1140 aa8.58□□□□□ -1.04
BEST3-212ENST00000553096 CDC37L1Q7L3B6 337 aa8.58□□□□□ -1.04
BEST3-212ENST00000553096 ZNF771Q7L3S4 317 aaPredicted RBP8.58□□□□□ -1.04
BEST3-212ENST00000553096 NBPF11Q86T75 865 aa8.58□□□□□ -1.04
BEST3-212ENST00000553096 CEP120Q8N960 986 aa8.58□□□□□ -1.04
BEST3-212ENST00000553096 ZNF397Q8NF99 534 aaPredicted RBP8.58□□□□□ -1.04
BEST3-212ENST00000553096 LEO1Q8WVC0 666 aaPredicted RBP8.58□□□□□ -1.04
BEST3-212ENST00000553096 TPCN1Q9ULQ1 816 aa8.58□□□□□ -1.04
BEST3-212ENST00000553096 MORC2Q9Y6X9 1032 aaPredicted RBP8.58□□□□□ -1.04
BEST3-212ENST00000553096 DTNBO60941 627 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 ATP5JP18859 108 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 KRT32Q14532 448 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 CAMK4Q16566 473 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 TMTC2Q8N394 836 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 BICD2Q8TD16 824 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 ZSCAN16Q9H4T2 348 aaPredicted RBP8.57□□□□□ -1.04
BEST3-212ENST00000553096 CFAP45Q9UL16 551 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 COL4A1P02462 1669 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 SOCS7O14512 581 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 SLFNL1Q499Z3 407 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 CKAP2LQ8IYA6 745 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 CCDC191Q8NCU4 936 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 RNF217Q8TC41 542 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 PUS3Q9BZE2 481 aaKnown RBP8.57□□□□□ -1.04
BEST3-212ENST00000553096 RIC1Q4ADV7 1423 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 CCDC66A2RUB6 948 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 SLC27A2O14975 620 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 RPS6KB1P23443 525 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 HLFQ16534 295 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 TSGA10IPQ3SY00 556 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 HSP90AB3PQ58FF7 597 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 KRT222Q8N1A0 295 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 SYNE4Q8N205 404 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 NECAB1Q8N987 351 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 FSD1Q9BTV5 496 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 KCND1Q9NSA2 647 aa8.57□□□□□ -1.04
BEST3-212ENST00000553096 TUBB4AP04350 444 aa8.56□□□□□ -1.04
BEST3-212ENST00000553096 STX1AQ16623 288 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms