RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 ZAP70P43403 619 aa12.28□□□□□ -0.44
MMP19-209ENST00000552872 CHAF1AQ13111 956 aaPredicted RBP12.28□□□□□ -0.44
MMP19-209ENST00000552872 MPNDQ8N594 471 aa12.28□□□□□ -0.44
MMP19-209ENST00000552872 FAM84BQ96KN1 310 aaPredicted RBP12.28□□□□□ -0.44
MMP19-209ENST00000552872 MAP7D2Q96T17 732 aa12.28□□□□□ -0.44
MMP19-209ENST00000552872 GGA1Q9UJY5 639 aa12.28□□□□□ -0.44
MMP19-209ENST00000552872 CHD4Q14839 1912 aa12.27□□□□□ -0.44
MMP19-209ENST00000552872 IFIT1P09914 478 aaKnown RBP12.27□□□□□ -0.44
MMP19-209ENST00000552872 RASGRF1Q13972 1273 aa12.27□□□□□ -0.44
MMP19-209ENST00000552872 WASHC4Q2M389 1173 aa12.27□□□□□ -0.44
MMP19-209ENST00000552872 SP8Q8IXZ3 490 aa12.27□□□□□ -0.44
MMP19-209ENST00000552872 ZNF277Q9NRM2 450 aaPredicted RBP12.27□□□□□ -0.44
MMP19-209ENST00000552872 FBXO3Q9UK99 471 aa12.27□□□□□ -0.44
MMP19-209ENST00000552872 DLEC1Q9Y238 1755 aa12.27□□□□□ -0.45
MMP19-209ENST00000552872 DUOX1Q9NRD9 1551 aa12.27□□□□□ -0.45
MMP19-209ENST00000552872 AKAP11Q9UKA4 1901 aa12.27□□□□□ -0.45
MMP19-209ENST00000552872 SPRYD3Q8NCJ5 442 aa12.27□□□□□ -0.45
MMP19-209ENST00000552872 C7orf43Q8WVR3 580 aa12.27□□□□□ -0.45
MMP19-209ENST00000552872 FBXW7Q969H0 707 aa12.27□□□□□ -0.45
MMP19-209ENST00000552872 CNKSR1Q969H4 720 aa12.27□□□□□ -0.45
MMP19-209ENST00000552872 MXD3Q9BW11 206 aa12.27□□□□□ -0.45
MMP19-209ENST00000552872 DBNDD1Q9H9R9 158 aa12.27□□□□□ -0.45
MMP19-209ENST00000552872 PIM2Q9P1W9 311 aa12.27□□□□□ -0.45
MMP19-209ENST00000552872 STAP2Q9UGK3 403 aa12.27□□□□□ -0.45
MMP19-209ENST00000552872 BRCA1P38398 1863 aaKnown RBP12.26□□□□□ -0.45
MMP19-209ENST00000552872 AOC3Q16853 763 aa12.26□□□□□ -0.45
MMP19-209ENST00000552872 CCDC158Q5M9N0 1113 aa12.26□□□□□ -0.45
MMP19-209ENST00000552872 GPATCH3Q96I76 525 aa12.26□□□□□ -0.45
MMP19-209ENST00000552872 ANKRD2Q9GZV1 360 aa12.26□□□□□ -0.45
MMP19-209ENST00000552872 IL25Q9H293 177 aa12.26□□□□□ -0.45
MMP19-209ENST00000552872 COL1A1P02452 1464 aaPredicted RBP12.26□□□□□ -0.45
MMP19-209ENST00000552872 LRRC37AA6NMS7 1700 aa12.26□□□□□ -0.45
MMP19-209ENST00000552872 DALRD3Q5D0E6 543 aaKnown RBP12.26□□□□□ -0.45
MMP19-209ENST00000552872 SMAP1Q8IYB5 467 aaPredicted RBP12.26□□□□□ -0.45
MMP19-209ENST00000552872 SYT17Q9BSW7 474 aa12.26□□□□□ -0.45
MMP19-209ENST00000552872 GPR108Q9NPR9 543 aa12.26□□□□□ -0.45
MMP19-209ENST00000552872 OFD1O75665 1012 aa12.25□□□□□ -0.45
MMP19-209ENST00000552872 RASSF7Q02833 373 aa12.25□□□□□ -0.45
MMP19-209ENST00000552872 UBE4AQ14139 1066 aa12.25□□□□□ -0.45
MMP19-209ENST00000552872 HMG20BQ9P0W2 317 aa12.25□□□□□ -0.45
MMP19-209ENST00000552872 LTBP1Q14766 1721 aa12.25□□□□□ -0.45
MMP19-209ENST00000552872 GLRX3O76003 335 aaKnown RBP12.25□□□□□ -0.45
MMP19-209ENST00000552872 TGFB2P61812 414 aa12.25□□□□□ -0.45
MMP19-209ENST00000552872 OSBPL3Q9H4L5 887 aa12.25□□□□□ -0.45
MMP19-209ENST00000552872 ABCF2Q9UG63 623 aa12.25□□□□□ -0.45
MMP19-209ENST00000552872 CD2APQ9Y5K6 639 aa12.25□□□□□ -0.45
MMP19-209ENST00000552872 ARAP2Q8WZ64 1704 aa12.25□□□□□ -0.45
MMP19-209ENST00000552872 TTC41PQ6P2S7 1318 aa12.24□□□□□ -0.45
MMP19-209ENST00000552872 ERC2O15083 957 aa12.24□□□□□ -0.45
MMP19-209ENST00000552872 CYP2E1P05181 493 aaPredicted RBP12.24□□□□□ -0.45
MMP19-209ENST00000552872 ATP5JP18859 108 aa12.24□□□□□ -0.45
MMP19-209ENST00000552872 HIBADHP31937 336 aaKnown RBP12.24□□□□□ -0.45
MMP19-209ENST00000552872 TERF1P54274 439 aa12.24□□□□□ -0.45
MMP19-209ENST00000552872 GRIK5Q16478 980 aa12.24□□□□□ -0.45
MMP19-209ENST00000552872 CAVIN4Q5BKX8 364 aa12.24□□□□□ -0.45
MMP19-209ENST00000552872 BMP2KLQ5H9B9 411 aa12.24□□□□□ -0.45
MMP19-209ENST00000552872 TMX4Q9H1E5 349 aaPredicted RBP12.24□□□□□ -0.45
MMP19-209ENST00000552872 PIH1D3Q9NQM4 214 aaKnown RBP12.24□□□□□ -0.45
MMP19-209ENST00000552872 FAM13BQ9NYF5 915 aa12.24□□□□□ -0.45
MMP19-209ENST00000552872 MYH13Q9UKX3 1938 aa12.24□□□□□ -0.45
MMP19-209ENST00000552872 IRS2Q9Y4H2 1338 aa12.24□□□□□ -0.45
MMP19-209ENST00000552872 CWC27Q6UX04 472 aaKnown RBP12.23□□□□□ -0.45
MMP19-209ENST00000552872 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.23□□□□□ -0.45
MMP19-209ENST00000552872 SPATA5Q8NB90 893 aa12.23□□□□□ -0.45
MMP19-209ENST00000552872 FAM227BQ96M60 508 aa12.23□□□□□ -0.45
MMP19-209ENST00000552872 SEC62Q99442 399 aaKnown RBP12.23□□□□□ -0.45
MMP19-209ENST00000552872 FSD1Q9BTV5 496 aa12.23□□□□□ -0.45
MMP19-209ENST00000552872 PAG1Q9NWQ8 432 aa12.23□□□□□ -0.45
MMP19-209ENST00000552872 HAUS7Q99871 368 aa12.23□□□□□ -0.45
MMP19-209ENST00000552872 IDH1O75874 414 aaKnown RBP12.22□□□□□ -0.45
MMP19-209ENST00000552872 ZC3H12CQ9C0D7 883 aaKnown RBP12.22□□□□□ -0.45
MMP19-209ENST00000552872 LEMD3Q9Y2U8 911 aa12.22□□□□□ -0.45
MMP19-209ENST00000552872 COL4A5P29400 1685 aa12.22□□□□□ -0.45
MMP19-209ENST00000552872 PCNTO95613 3336 aa12.22□□□□□ -0.45
MMP19-209ENST00000552872 SCN9AQ15858 1988 aa12.22□□□□□ -0.45
MMP19-209ENST00000552872 YBX3P16989 372 aaKnown RBP eCLIP12.22□□□□□ -0.45
MMP19-209ENST00000552872 ATP2B4P23634 1241 aa12.22□□□□□ -0.45
MMP19-209ENST00000552872 PRELPP51888 382 aa12.22□□□□□ -0.45
MMP19-209ENST00000552872 MFAP1P55081 439 aaKnown RBP12.22□□□□□ -0.45
MMP19-209ENST00000552872 CCDC129Q6ZRS4 1044 aa12.22□□□□□ -0.45
MMP19-209ENST00000552872 FBXO33Q7Z6M2 555 aa12.22□□□□□ -0.45
MMP19-209ENST00000552872 CCDC88AQ3V6T2 1871 aa12.21□□□□□ -0.45
MMP19-209ENST00000552872 F8W031 263 aaPredicted RBP12.21□□□□□ -0.45
MMP19-209ENST00000552872 G3V3G9 751 aa12.21□□□□□ -0.45
MMP19-209ENST00000552872 PPIP5K2O43314 1243 aa12.21□□□□□ -0.45
MMP19-209ENST00000552872 DCAF8Q5TAQ9 597 aa12.21□□□□□ -0.45
MMP19-209ENST00000552872 ZSCAN30Q86W11 494 aa12.21□□□□□ -0.45
MMP19-209ENST00000552872 CD209Q9NNX6 404 aa12.21□□□□□ -0.45
MMP19-209ENST00000552872 ARID4AP29374 1257 aaPredicted RBP12.21□□□□□ -0.46
MMP19-209ENST00000552872 GTF2IP78347 998 aa12.21□□□□□ -0.46
MMP19-209ENST00000552872 CCDC93Q567U6 631 aa12.21□□□□□ -0.46
MMP19-209ENST00000552872 GAS2L3Q86XJ1 694 aa12.21□□□□□ -0.46
MMP19-209ENST00000552872 CNTROBQ8N137 903 aa12.21□□□□□ -0.46
MMP19-209ENST00000552872 CNKSR2Q8WXI2 1034 aa12.21□□□□□ -0.46
MMP19-209ENST00000552872 C22orf23Q9BZE7 217 aa12.21□□□□□ -0.46
MMP19-209ENST00000552872 A0A0D9SFI3 127 aa12.2□□□□□ -0.46
MMP19-209ENST00000552872 NFKBIEO00221 500 aa12.2□□□□□ -0.46
MMP19-209ENST00000552872 PRDX5P30044 214 aa12.2□□□□□ -0.46
MMP19-209ENST00000552872 UTP14CQ5TAP6 766 aaKnown RBP12.2□□□□□ -0.46
MMP19-209ENST00000552872 ARHGAP27Q6ZUM4 889 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms