RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 CCT4P50991 539 aaKnown RBP11.08□□□□□ -0.64
TMEM116-217ENST00000552801 ZNF280AP59817 542 aaPredicted RBP11.08□□□□□ -0.64
TMEM116-217ENST00000552801 FKBP5Q13451 457 aaPredicted RBP11.08□□□□□ -0.64
TMEM116-217ENST00000552801 GREM2Q9H772 168 aa11.08□□□□□ -0.64
TMEM116-217ENST00000552801 PSME4Q14997 1843 aa11.08□□□□□ -0.64
TMEM116-217ENST00000552801 SLC10A3P09131 477 aa11.07□□□□□ -0.64
TMEM116-217ENST00000552801 CWF19L2Q2TBE0 894 aaKnown RBP11.07□□□□□ -0.64
TMEM116-217ENST00000552801 TAF7LQ5H9L4 462 aa11.07□□□□□ -0.64
TMEM116-217ENST00000552801 TSPYL6Q8N831 410 aa11.07□□□□□ -0.64
TMEM116-217ENST00000552801 TTLL11Q8NHH1 800 aa11.07□□□□□ -0.64
TMEM116-217ENST00000552801 COA1Q9GZY4 146 aa11.07□□□□□ -0.64
TMEM116-217ENST00000552801 RNF186Q9NXI6 227 aa11.07□□□□□ -0.64
TMEM116-217ENST00000552801 MINPP1Q9UNW1 487 aa11.07□□□□□ -0.64
TMEM116-217ENST00000552801 LEMD3Q9Y2U8 911 aa11.07□□□□□ -0.64
TMEM116-217ENST00000552801 ASTN2O75129 1339 aaPredicted RBP11.06□□□□□ -0.64
TMEM116-217ENST00000552801 PAPPA2Q9BXP8 1791 aa11.06□□□□□ -0.64
TMEM116-217ENST00000552801 NEURL1BA8MQ27 555 aa11.06□□□□□ -0.64
TMEM116-217ENST00000552801 FAM155AB1AL88 458 aaPredicted RBP11.06□□□□□ -0.64
TMEM116-217ENST00000552801 MMP14P50281 582 aa11.06□□□□□ -0.64
TMEM116-217ENST00000552801 STRIP1Q5VSL9 837 aa11.06□□□□□ -0.64
TMEM116-217ENST00000552801 TTLL5Q6EMB2 1281 aa11.06□□□□□ -0.64
TMEM116-217ENST00000552801 ARMC9Q7Z3E5 817 aa11.06□□□□□ -0.64
TMEM116-217ENST00000552801 ZIC5Q96T25 663 aa11.06□□□□□ -0.64
TMEM116-217ENST00000552801 COL4A1P02462 1669 aa11.06□□□□□ -0.64
TMEM116-217ENST00000552801 ZNF804BA4D1E1 1349 aa11.06□□□□□ -0.64
TMEM116-217ENST00000552801 ANKRD18BA2A2Z9 1011 aa11.05□□□□□ -0.64
TMEM116-217ENST00000552801 MYO1BO43795 1136 aa11.05□□□□□ -0.64
TMEM116-217ENST00000552801 IGKV5-2P06315 115 aa11.05□□□□□ -0.64
TMEM116-217ENST00000552801 ITGA6P23229 1130 aa11.05□□□□□ -0.64
TMEM116-217ENST00000552801 CCDC27Q2M243 656 aa11.05□□□□□ -0.64
TMEM116-217ENST00000552801 APOBEC3FQ8IUX4 373 aaKnown RBP11.05□□□□□ -0.64
TMEM116-217ENST00000552801 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.05□□□□□ -0.64
TMEM116-217ENST00000552801 SALL2Q9Y467 1007 aaPredicted RBP11.05□□□□□ -0.64
TMEM116-217ENST00000552801 ZNF609O15014 1411 aa11.05□□□□□ -0.64
TMEM116-217ENST00000552801 CACNA1FO60840 1977 aa11.04□□□□□ -0.64
TMEM116-217ENST00000552801 UBE2Q2LH0YL09 131 aa11.04□□□□□ -0.64
TMEM116-217ENST00000552801 ANP32CO43423 234 aa11.04□□□□□ -0.64
TMEM116-217ENST00000552801 SREBF2Q12772 1141 aa11.04□□□□□ -0.64
TMEM116-217ENST00000552801 FLIIQ13045 1269 aa11.04□□□□□ -0.64
TMEM116-217ENST00000552801 IFIT5Q13325 482 aaKnown RBP11.04□□□□□ -0.64
TMEM116-217ENST00000552801 GCKRQ14397 625 aa11.04□□□□□ -0.64
TMEM116-217ENST00000552801 RASAL3Q86YV0 1011 aa11.04□□□□□ -0.64
TMEM116-217ENST00000552801 WWC1Q8IX03 1113 aa11.04□□□□□ -0.64
TMEM116-217ENST00000552801 EFCAB3Q8N7B9 438 aa11.04□□□□□ -0.64
TMEM116-217ENST00000552801 DNAAF4Q8WXU2 420 aa11.04□□□□□ -0.64
TMEM116-217ENST00000552801 CSRNP1Q96S65 589 aa11.04□□□□□ -0.64
TMEM116-217ENST00000552801 MRS2Q9HD23 443 aa11.04□□□□□ -0.64
TMEM116-217ENST00000552801 IL16Q14005 1332 aa11.04□□□□□ -0.64
TMEM116-217ENST00000552801 H7C1W4 665 aa11.03□□□□□ -0.64
TMEM116-217ENST00000552801 SASH1O94885 1247 aa11.03□□□□□ -0.64
TMEM116-217ENST00000552801 PLCG2P16885 1265 aa11.03□□□□□ -0.64
TMEM116-217ENST00000552801 GTF2IP78347 998 aa11.03□□□□□ -0.64
TMEM116-217ENST00000552801 DLGAP5Q15398 846 aa11.03□□□□□ -0.64
TMEM116-217ENST00000552801 NBPF9Q3BBW0 867 aa11.03□□□□□ -0.64
TMEM116-217ENST00000552801 DACT2Q5SW24 774 aa11.03□□□□□ -0.64
TMEM116-217ENST00000552801 ZNF804AQ7Z570 1209 aa11.03□□□□□ -0.64
TMEM116-217ENST00000552801 CTU1Q7Z7A3 348 aaKnown RBP11.03□□□□□ -0.64
TMEM116-217ENST00000552801 KIAA0825Q8IV33 1275 aa11.03□□□□□ -0.64
TMEM116-217ENST00000552801 LINS1Q8NG48 757 aa11.03□□□□□ -0.64
TMEM116-217ENST00000552801 GMLQ99445 158 aa11.03□□□□□ -0.64
TMEM116-217ENST00000552801 OCEL1Q9H607 264 aa11.03□□□□□ -0.64
TMEM116-217ENST00000552801 SCAF8Q9UPN6 1271 aaKnown RBP11.03□□□□□ -0.64
TMEM116-217ENST00000552801 GTF3C3Q9Y5Q9 886 aa11.03□□□□□ -0.64
TMEM116-217ENST00000552801 WNT10BO00744 389 aa11.03□□□□□ -0.64
TMEM116-217ENST00000552801 RBM5P52756 815 aaKnown RBP eCLIP11.03□□□□□ -0.64
TMEM116-217ENST00000552801 PRKG1Q13976 671 aa11.03□□□□□ -0.64
TMEM116-217ENST00000552801 PRAMEF18Q5VWM3 479 aa11.03□□□□□ -0.64
TMEM116-217ENST00000552801 G2E3Q7L622 706 aa11.03□□□□□ -0.64
TMEM116-217ENST00000552801 HS6ST3Q8IZP7 471 aa11.03□□□□□ -0.64
TMEM116-217ENST00000552801 MXD3Q9BW11 206 aa11.03□□□□□ -0.64
TMEM116-217ENST00000552801 PPP1R12BO60237 982 aaPredicted RBP11.02□□□□□ -0.65
TMEM116-217ENST00000552801 PLIN1O60240 522 aa11.02□□□□□ -0.65
TMEM116-217ENST00000552801 RGS19P49795 217 aa11.02□□□□□ -0.65
TMEM116-217ENST00000552801 SOX10P56693 466 aa11.02□□□□□ -0.65
TMEM116-217ENST00000552801 IRX5P78411 483 aaPredicted RBP11.02□□□□□ -0.65
TMEM116-217ENST00000552801 CHRNDQ07001 517 aa11.02□□□□□ -0.65
TMEM116-217ENST00000552801 PKN2Q16513 984 aaKnown RBP11.02□□□□□ -0.65
TMEM116-217ENST00000552801 CCDC57Q2TAC2 916 aa11.02□□□□□ -0.65
TMEM116-217ENST00000552801 MOB2Q70IA6 237 aa11.02□□□□□ -0.65
TMEM116-217ENST00000552801 PLA2G12BQ9BX93 195 aa11.02□□□□□ -0.65
TMEM116-217ENST00000552801 CNNM1Q9NRU3 951 aa11.02□□□□□ -0.65
TMEM116-217ENST00000552801 C9orf78Q9NZ63 289 aaPredicted RBP11.02□□□□□ -0.65
TMEM116-217ENST00000552801 ANGEL1Q9UNK9 670 aaKnown RBP11.02□□□□□ -0.65
TMEM116-217ENST00000552801 COLQQ9Y215 455 aaPredicted RBP11.02□□□□□ -0.65
TMEM116-217ENST00000552801 F8W031 263 aaPredicted RBP11.01□□□□□ -0.65
TMEM116-217ENST00000552801 SLC10A4Q96EP9 437 aa11.01□□□□□ -0.65
TMEM116-217ENST00000552801 FANCIQ9NVI1 1328 aa11□□□□□ -0.65
TMEM116-217ENST00000552801 TAF5LO75529 589 aa11□□□□□ -0.65
TMEM116-217ENST00000552801 TBC1D8O95759 1140 aa11□□□□□ -0.65
TMEM116-217ENST00000552801 ALDH1A1P00352 501 aa11□□□□□ -0.65
TMEM116-217ENST00000552801 SUPT20HL1Q3ZLR7 823 aa11□□□□□ -0.65
TMEM116-217ENST00000552801 SLC4A10Q6U841 1118 aa11□□□□□ -0.65
TMEM116-217ENST00000552801 WDR63Q8IWG1 891 aa11□□□□□ -0.65
TMEM116-217ENST00000552801 VEZTQ9HBM0 779 aa11□□□□□ -0.65
TMEM116-217ENST00000552801 CD209Q9NNX6 404 aa11□□□□□ -0.65
TMEM116-217ENST00000552801 WTIPA6NIX2 430 aaPredicted RBP10.99□□□□□ -0.65
TMEM116-217ENST00000552801 EXOSC9Q06265 439 aaKnown RBP10.99□□□□□ -0.65
TMEM116-217ENST00000552801 OTUD7BQ6GQQ9 843 aa10.99□□□□□ -0.65
TMEM116-217ENST00000552801 LDHAL6AQ6ZMR3 332 aa10.99□□□□□ -0.65
TMEM116-217ENST00000552801 TXNRD3Q86VQ6 643 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms