RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 HGSNATQ68CP4 663 aa5.49□□□□□ -1.53
NPAS3-212ENST00000552696 PRPF40BQ6NWY9 871 aaKnown RBP5.49□□□□□ -1.53
NPAS3-212ENST00000552696 FOXD4L3Q6VB84 417 aaPredicted RBP5.49□□□□□ -1.53
NPAS3-212ENST00000552696 NPAS4Q8IUM7 802 aa5.49□□□□□ -1.53
NPAS3-212ENST00000552696 GLIS3Q8NEA6 775 aa5.49□□□□□ -1.53
NPAS3-212ENST00000552696 DCAF11Q8TEB1 546 aa5.49□□□□□ -1.53
NPAS3-212ENST00000552696 FBF1Q8TES7 1133 aa5.49□□□□□ -1.53
NPAS3-212ENST00000552696 SLC7A3Q8WY07 619 aa5.49□□□□□ -1.53
NPAS3-212ENST00000552696 LENG1Q96BZ8 264 aaPredicted RBP5.49□□□□□ -1.53
NPAS3-212ENST00000552696 SPOCK3Q9BQ16 436 aa5.49□□□□□ -1.53
NPAS3-212ENST00000552696 SEC31BQ9NQW1 1179 aa5.49□□□□□ -1.53
NPAS3-212ENST00000552696 NLRP2Q9NX02 1062 aa5.49□□□□□ -1.53
NPAS3-212ENST00000552696 KCNK4Q9NYG8 393 aa5.49□□□□□ -1.53
NPAS3-212ENST00000552696 USP21Q9UK80 565 aa5.49□□□□□ -1.53
NPAS3-212ENST00000552696 C9orf172C9J069 976 aa5.48□□□□□ -1.53
NPAS3-212ENST00000552696 PROCP04070 461 aa5.48□□□□□ -1.53
NPAS3-212ENST00000552696 LDHBP07195 334 aaKnown RBP5.48□□□□□ -1.53
NPAS3-212ENST00000552696 ESRRAP11474 423 aaPredicted RBP5.48□□□□□ -1.53
NPAS3-212ENST00000552696 IKBKEQ14164 716 aa5.48□□□□□ -1.53
NPAS3-212ENST00000552696 ADGRE1Q14246 886 aa5.48□□□□□ -1.53
NPAS3-212ENST00000552696 KLHL23Q8NBE8 558 aa5.48□□□□□ -1.53
NPAS3-212ENST00000552696 KLHDC7BQ96G42 594 aa5.48□□□□□ -1.53
NPAS3-212ENST00000552696 BCO2Q9BYV7 579 aa5.48□□□□□ -1.53
NPAS3-212ENST00000552696 TRAK1Q9UPV9 953 aa5.48□□□□□ -1.53
NPAS3-212ENST00000552696 TMEM238LA0A1B0GVL6 79 aa5.47□□□□□ -1.53
NPAS3-212ENST00000552696 SOX1O00570 391 aaPredicted RBP5.47□□□□□ -1.53
NPAS3-212ENST00000552696 MSTNO14793 375 aa5.47□□□□□ -1.53
NPAS3-212ENST00000552696 DDX3YO15523 660 aaKnown RBP5.47□□□□□ -1.53
NPAS3-212ENST00000552696 ADAM11O75078 769 aa5.47□□□□□ -1.53
NPAS3-212ENST00000552696 WISP1O95388 367 aa5.47□□□□□ -1.53
NPAS3-212ENST00000552696 ITPKAP23677 461 aa5.47□□□□□ -1.53
NPAS3-212ENST00000552696 CD68P34810 354 aaPredicted RBP5.47□□□□□ -1.53
NPAS3-212ENST00000552696 NLRP12P59046 1061 aa5.47□□□□□ -1.53
NPAS3-212ENST00000552696 PCDH1Q08174 1060 aa5.47□□□□□ -1.53
NPAS3-212ENST00000552696 C19orf57Q0VDD7 668 aa5.47□□□□□ -1.53
NPAS3-212ENST00000552696 ALG1LQ6GMV1 187 aa5.47□□□□□ -1.53
NPAS3-212ENST00000552696 IGF2-ASQ6U949 168 aa5.47□□□□□ -1.53
NPAS3-212ENST00000552696 UBASH3BQ8TF42 649 aa5.47□□□□□ -1.53
NPAS3-212ENST00000552696 FOXD4L4Q8WXT5 416 aaPredicted RBP5.47□□□□□ -1.53
NPAS3-212ENST00000552696 WNT8BQ93098 351 aa5.47□□□□□ -1.53
NPAS3-212ENST00000552696 MRPL18Q9H0U6 180 aaKnown RBP5.47□□□□□ -1.53
NPAS3-212ENST00000552696 CLEC4MQ9H2X3 399 aaPredicted RBP5.47□□□□□ -1.53
NPAS3-212ENST00000552696 ZNF576Q9H609 170 aa5.47□□□□□ -1.53
NPAS3-212ENST00000552696 IGHA1P01876 353 aa5.46□□□□□ -1.54
NPAS3-212ENST00000552696 GATA4P43694 442 aa5.46□□□□□ -1.54
NPAS3-212ENST00000552696 ARL4DP49703 201 aa5.46□□□□□ -1.54
NPAS3-212ENST00000552696 FCGRTP55899 365 aa5.46□□□□□ -1.54
NPAS3-212ENST00000552696 NRG1Q02297 640 aaPredicted RBP5.46□□□□□ -1.54
NPAS3-212ENST00000552696 COL19A1Q14993 1142 aa5.46□□□□□ -1.54
NPAS3-212ENST00000552696 EAPPQ56P03 285 aaPredicted RBP5.46□□□□□ -1.54
NPAS3-212ENST00000552696 TMCO4Q5TGY1 634 aa5.46□□□□□ -1.54
NPAS3-212ENST00000552696 NXPE4Q6UWF7 544 aa5.46□□□□□ -1.54
NPAS3-212ENST00000552696 TXNRD3Q86VQ6 643 aa5.46□□□□□ -1.54
NPAS3-212ENST00000552696 OSGEPQ9NPF4 335 aa5.46□□□□□ -1.54
NPAS3-212ENST00000552696 F8W735 103 aaPredicted RBP5.45□□□□□ -1.54
NPAS3-212ENST00000552696 PRPF40AO75400 957 aaKnown RBP5.45□□□□□ -1.54
NPAS3-212ENST00000552696 NOS3P29474 1203 aa5.45□□□□□ -1.54
NPAS3-212ENST00000552696 TRIM26Q12899 539 aaPredicted RBP5.45□□□□□ -1.54
NPAS3-212ENST00000552696 ZNF423Q2M1K9 1284 aa5.45□□□□□ -1.54
NPAS3-212ENST00000552696 DTHD1Q6ZMT9 781 aa5.45□□□□□ -1.54
NPAS3-212ENST00000552696 ACAD11Q709F0 780 aa5.45□□□□□ -1.54
NPAS3-212ENST00000552696 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.45□□□□□ -1.54
NPAS3-212ENST00000552696 AGGF1Q8N302 714 aaeCLIP5.45□□□□□ -1.54
NPAS3-212ENST00000552696 SOX17Q9H6I2 414 aaPredicted RBP5.45□□□□□ -1.54
NPAS3-212ENST00000552696 ALX3O95076 343 aa5.44□□□□□ -1.54
NPAS3-212ENST00000552696 B3GALT4O96024 378 aa5.44□□□□□ -1.54
NPAS3-212ENST00000552696 IREB2P48200 963 aaKnown RBP5.44□□□□□ -1.54
NPAS3-212ENST00000552696 GSTM4Q03013 218 aa5.44□□□□□ -1.54
NPAS3-212ENST00000552696 PTPN12Q05209 780 aaKnown RBP5.44□□□□□ -1.54
NPAS3-212ENST00000552696 FAAP100Q0VG06 881 aa5.44□□□□□ -1.54
NPAS3-212ENST00000552696 DUOXA2Q1HG44 320 aa5.44□□□□□ -1.54
NPAS3-212ENST00000552696 WFDC12Q8WWY7 111 aa5.44□□□□□ -1.54
NPAS3-212ENST00000552696 DUSP9Q99956 384 aaKnown RBP5.44□□□□□ -1.54
NPAS3-212ENST00000552696 USP26Q9BXU7 913 aa5.44□□□□□ -1.54
NPAS3-212ENST00000552696 OSBPL7Q9BZF2 842 aa5.44□□□□□ -1.54
NPAS3-212ENST00000552696 AKTIPQ9H8T0 292 aa5.44□□□□□ -1.54
NPAS3-212ENST00000552696 RNF19AQ9NV58 838 aa5.44□□□□□ -1.54
NPAS3-212ENST00000552696 SPG7Q9UQ90 795 aa5.44□□□□□ -1.54
NPAS3-212ENST00000552696 KIAA1211Q6ZU35 1233 aa5.43□□□□□ -1.54
NPAS3-212ENST00000552696 FBXO33Q7Z6M2 555 aa5.43□□□□□ -1.54
NPAS3-212ENST00000552696 C3orf58Q8NDZ4 430 aa5.43□□□□□ -1.54
NPAS3-212ENST00000552696 C12orf49Q9H741 205 aa5.43□□□□□ -1.54
NPAS3-212ENST00000552696 LOC100289279A0A1B0GTE1 492 aa5.42□□□□□ -1.54
NPAS3-212ENST00000552696 GIPC1O14908 333 aa5.42□□□□□ -1.54
NPAS3-212ENST00000552696 XRCC5P13010 732 aaKnown RBP5.42□□□□□ -1.54
NPAS3-212ENST00000552696 GLB1P16278 677 aa5.42□□□□□ -1.54
NPAS3-212ENST00000552696 ERCC3P19447 782 aa5.42□□□□□ -1.54
NPAS3-212ENST00000552696 GNA15P30679 374 aa5.42□□□□□ -1.54
NPAS3-212ENST00000552696 GSTT1P30711 240 aa5.42□□□□□ -1.54
NPAS3-212ENST00000552696 ZNF157P51786 506 aaPredicted RBP5.42□□□□□ -1.54
NPAS3-212ENST00000552696 TAGLNQ01995 201 aaKnown RBP5.42□□□□□ -1.54
NPAS3-212ENST00000552696 DOC2BQ14184 412 aa5.42□□□□□ -1.54
NPAS3-212ENST00000552696 RPS26P11Q5JNZ5 115 aaPredicted RBP5.42□□□□□ -1.54
NPAS3-212ENST00000552696 Q6ZS46 218 aa5.42□□□□□ -1.54
NPAS3-212ENST00000552696 TMEM130Q8N3G9 435 aa5.42□□□□□ -1.54
NPAS3-212ENST00000552696 MEGF10Q96KG7 1140 aa5.42□□□□□ -1.54
NPAS3-212ENST00000552696 TRIM56Q9BRZ2 755 aaKnown RBP5.42□□□□□ -1.54
NPAS3-212ENST00000552696 SRCIN1Q9C0H9 1055 aa5.42□□□□□ -1.54
NPAS3-212ENST00000552696 NRSN2Q9GZP1 204 aa5.42□□□□□ -1.54
NPAS3-212ENST00000552696 TPSG1Q9NRR2 321 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms