RNA–Protein interactions for RNA: ENST00000552428.6

R3HDM2-214, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 430 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-214ENST00000552428 TTBK2Q6IQ55 1244 aa7.79□□□□□ -1.16
R3HDM2-214ENST00000552428 SLITRK4Q8IW52 837 aa7.79□□□□□ -1.16
R3HDM2-214ENST00000552428 CEP120Q8N960 986 aa7.79□□□□□ -1.16
R3HDM2-214ENST00000552428 NKD1Q969G9 470 aa7.79□□□□□ -1.16
R3HDM2-214ENST00000552428 SRRTQ9BXP5 876 aaKnown RBP7.79□□□□□ -1.16
R3HDM2-214ENST00000552428 LRRC3Q9BY71 257 aa7.79□□□□□ -1.16
R3HDM2-214ENST00000552428 DZANK1Q9NVP4 752 aa7.79□□□□□ -1.16
R3HDM2-214ENST00000552428 UBP1Q9NZI7 540 aa7.79□□□□□ -1.16
R3HDM2-214ENST00000552428 ROBO2Q9HCK4 1378 aa7.79□□□□□ -1.16
R3HDM2-214ENST00000552428 DCDC2BA2VCK2 349 aa7.78□□□□□ -1.16
R3HDM2-214ENST00000552428 KHNYNO15037 678 aaKnown RBP7.78□□□□□ -1.16
R3HDM2-214ENST00000552428 ACPPP15309 386 aa7.78□□□□□ -1.16
R3HDM2-214ENST00000552428 TNP2Q05952 138 aa7.78□□□□□ -1.16
R3HDM2-214ENST00000552428 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.78□□□□□ -1.166e-6■□□□□ 8.6
R3HDM2-214ENST00000552428 FAM196AQ6ZSG2 479 aa7.78□□□□□ -1.16
R3HDM2-214ENST00000552428 TRIM42Q8IWZ5 723 aa7.78□□□□□ -1.16
R3HDM2-214ENST00000552428 TMEM102Q8N9M5 508 aaPredicted RBP7.78□□□□□ -1.16
R3HDM2-214ENST00000552428 HNRNPLLQ8WVV9 542 aaKnown RBP7.78□□□□□ -1.16
R3HDM2-214ENST00000552428 IPO9Q96P70 1041 aaKnown RBP7.78□□□□□ -1.16
R3HDM2-214ENST00000552428 DNMT3LQ9UJW3 386 aa7.78□□□□□ -1.16
R3HDM2-214ENST00000552428 R3HCC1Q9Y3T6 440 aaKnown RBP7.78□□□□□ -1.16
R3HDM2-214ENST00000552428 SENP3-EIF4A1A0A087X0R7 540 aa7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 AVPP01185 164 aa7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 NEFMP07197 916 aa7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 THBS1P07996 1170 aa7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 MAPTP10636 758 aaKnown RBP7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 TFE3P19532 575 aaPredicted RBP7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 CRKP46108 304 aa7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 NRLP54845 237 aa7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 SPEM2Q0P670 501 aa7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 CNGB1Q14028 1251 aaPredicted RBP7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 UBAP2LQ14157 1087 aaKnown RBP7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 RASA3Q14644 834 aa7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 TRIM46Q7Z4K8 759 aa7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 CCDC84Q86UT8 332 aaPredicted RBP7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 ANAPC16Q96DE5 110 aa7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 SHDQ96IW2 340 aa7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 DEPDC7Q96QD5 511 aa7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 ZNF576Q9H609 170 aa7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 SEC31BQ9NQW1 1179 aa7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 SNTG2Q9NY99 539 aa7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 MARK1Q9P0L2 795 aa7.77□□□□□ -1.17
R3HDM2-214ENST00000552428 A0A096LPE4 126 aa7.76□□□□□ -1.17
R3HDM2-214ENST00000552428 A0A1W2PPZ6 126 aa7.76□□□□□ -1.17
R3HDM2-214ENST00000552428 NFKBIEO00221 500 aa7.76□□□□□ -1.17
R3HDM2-214ENST00000552428 GFRA3O60609 400 aa7.76□□□□□ -1.17
R3HDM2-214ENST00000552428 BMP1P13497 986 aa7.76□□□□□ -1.17
R3HDM2-214ENST00000552428 DHX32Q7L7V1 743 aaKnown RBP7.76□□□□□ -1.17
R3HDM2-214ENST00000552428 NXPE3Q969Y0 559 aa7.76□□□□□ -1.17
R3HDM2-214ENST00000552428 NUCKS1Q9H1E3 243 aaKnown RBP7.76□□□□□ -1.17
R3HDM2-214ENST00000552428 STRN4Q9NRL3 753 aa7.76□□□□□ -1.17
R3HDM2-214ENST00000552428 METTL12A8MUP2 240 aa7.75□□□□□ -1.17
R3HDM2-214ENST00000552428 PTPROQ16827 1216 aa7.75□□□□□ -1.17
R3HDM2-214ENST00000552428 SPRED3Q2MJR0 410 aa7.75□□□□□ -1.17
R3HDM2-214ENST00000552428 RNF187Q5TA31 235 aaPredicted RBP7.75□□□□□ -1.17
R3HDM2-214ENST00000552428 KCNB2Q92953 911 aa7.75□□□□□ -1.17
R3HDM2-214ENST00000552428 GPATCH3Q96I76 525 aa7.75□□□□□ -1.17
R3HDM2-214ENST00000552428 RNPC3Q96LT9 517 aaKnown RBP7.75□□□□□ -1.17
R3HDM2-214ENST00000552428 NSUN5Q96P11 429 aaKnown RBP7.75□□□□□ -1.17
R3HDM2-214ENST00000552428 BRINP2Q9C0B6 783 aa7.75□□□□□ -1.17
R3HDM2-214ENST00000552428 NDFIP2Q9NV92 336 aa7.75□□□□□ -1.17
R3HDM2-214ENST00000552428 GPN3Q9UHW5 284 aaPredicted RBP7.75□□□□□ -1.17
R3HDM2-214ENST00000552428 NAP1L2Q9ULW6 460 aaPredicted RBP7.75□□□□□ -1.17
R3HDM2-214ENST00000552428 PDZRN3Q9UPQ7 1066 aa7.75□□□□□ -1.17
R3HDM2-214ENST00000552428 EEA1Q15075 1411 aa7.75□□□□□ -1.17
R3HDM2-214ENST00000552428 H7C1W4 665 aa7.74□□□□□ -1.17
R3HDM2-214ENST00000552428 TRPA1O75762 1119 aa7.74□□□□□ -1.17
R3HDM2-214ENST00000552428 SMCPP49901 116 aaPredicted RBP7.74□□□□□ -1.17
R3HDM2-214ENST00000552428 GPLD1P80108 840 aa7.74□□□□□ -1.17
R3HDM2-214ENST00000552428 MPP2Q14168 576 aa7.74□□□□□ -1.17
R3HDM2-214ENST00000552428 GATAD2BQ8WXI9 593 aa7.74□□□□□ -1.17
R3HDM2-214ENST00000552428 ANP32BQ92688 251 aaKnown RBP7.74□□□□□ -1.17
R3HDM2-214ENST00000552428 BHMTQ93088 406 aa7.74□□□□□ -1.17
R3HDM2-214ENST00000552428 ZFP42Q96MM3 310 aa7.74□□□□□ -1.17
R3HDM2-214ENST00000552428 HHIPQ96QV1 700 aa7.74□□□□□ -1.17
R3HDM2-214ENST00000552428 MAP7D2Q96T17 732 aa7.74□□□□□ -1.17
R3HDM2-214ENST00000552428 PDCL3Q9H2J4 239 aa7.74□□□□□ -1.17
R3HDM2-214ENST00000552428 TMEM39AQ9NV64 488 aa7.74□□□□□ -1.17
R3HDM2-214ENST00000552428 MSRB2Q9Y3D2 182 aa7.74□□□□□ -1.17
R3HDM2-214ENST00000552428 SAMM50Q9Y512 469 aa7.74□□□□□ -1.17
R3HDM2-214ENST00000552428 WRNQ14191 1432 aaPredicted RBP eCLIP7.73□□□□□ -1.17
R3HDM2-214ENST00000552428 PDE2AO00408 941 aaPredicted RBP7.73□□□□□ -1.17
R3HDM2-214ENST00000552428 SMAD7O15105 426 aaKnown RBP7.73□□□□□ -1.17
R3HDM2-214ENST00000552428 PAGE1O75459 146 aa7.73□□□□□ -1.17
R3HDM2-214ENST00000552428 LMNB1P20700 586 aa7.73□□□□□ -1.17
R3HDM2-214ENST00000552428 EIF6P56537 245 aaKnown RBP7.73□□□□□ -1.17
R3HDM2-214ENST00000552428 FAAP100Q0VG06 881 aa7.73□□□□□ -1.17
R3HDM2-214ENST00000552428 CWF19L2Q2TBE0 894 aaKnown RBP7.73□□□□□ -1.17
R3HDM2-214ENST00000552428 SEZ6Q53EL9 994 aa7.73□□□□□ -1.17
R3HDM2-214ENST00000552428 PLEKHG4Q58EX7 1191 aa7.73□□□□□ -1.17
R3HDM2-214ENST00000552428 RIPOR1Q6ZS17 1223 aa7.73□□□□□ -1.17
R3HDM2-214ENST00000552428 TEX2Q8IWB9 1127 aa7.73□□□□□ -1.17
R3HDM2-214ENST00000552428 OR6P1Q8NGX9 317 aa7.73□□□□□ -1.17
R3HDM2-214ENST00000552428 ZCRB1Q8TBF4 217 aaKnown RBP7.73□□□□□ -1.17
R3HDM2-214ENST00000552428 TRPM4Q8TD43 1214 aa7.73□□□□□ -1.17
R3HDM2-214ENST00000552428 SLC30A3Q99726 388 aa7.73□□□□□ -1.17
R3HDM2-214ENST00000552428 PBX4Q9BYU1 374 aa7.73□□□□□ -1.17
R3HDM2-214ENST00000552428 CCDC113Q9H0I3 377 aa7.73□□□□□ -1.17
R3HDM2-214ENST00000552428 MIR1-1HGQ9H1L0 117 aa7.73□□□□□ -1.17
R3HDM2-214ENST00000552428 PPT2Q9UMR5 302 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms