RNA–Protein interactions for RNA: ENST00000552352.1

RPH3A-223, Transcript of rabphilin 3A, humanhuman

TSL 3

Gene RPH3A, Length 2,535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-223ENST00000552352 KINO60870 393 aaKnown RBP9.34□□□□□ -0.91
RPH3A-223ENST00000552352 FAM160A1Q05DH4 1040 aa9.34□□□□□ -0.91
RPH3A-223ENST00000552352 DHX8Q14562 1220 aaKnown RBP9.34□□□□□ -0.91
RPH3A-223ENST00000552352 USPL1Q5W0Q7 1092 aa9.34□□□□□ -0.91
RPH3A-223ENST00000552352 NBPF11Q86T75 865 aa9.34□□□□□ -0.91
RPH3A-223ENST00000552352 TICAM2Q86XR7 235 aa9.34□□□□□ -0.91
RPH3A-223ENST00000552352 AOPEPQ8N6M6 819 aa9.34□□□□□ -0.91
RPH3A-223ENST00000552352 PPP1R13BQ96KQ4 1090 aa9.34□□□□□ -0.91
RPH3A-223ENST00000552352 PA2G4Q9UQ80 394 aaKnown RBP9.34□□□□□ -0.91
RPH3A-223ENST00000552352 ROBO1Q9Y6N7 1651 aa9.34□□□□□ -0.91
RPH3A-223ENST00000552352 LTBP4Q8N2S1 1624 aa9.33□□□□□ -0.92
RPH3A-223ENST00000552352 RFX7Q2KHR2 1363 aa9.33□□□□□ -0.92
RPH3A-223ENST00000552352 ERCC6LQ2NKX8 1250 aa9.33□□□□□ -0.92
RPH3A-223ENST00000552352 E4F1Q66K89 784 aaPredicted RBP9.33□□□□□ -0.92
RPH3A-223ENST00000552352 ATL3Q6DD88 541 aa9.33□□□□□ -0.92
RPH3A-223ENST00000552352 NAA16Q6N069 864 aaPredicted RBP9.33□□□□□ -0.92
RPH3A-223ENST00000552352 ENGASEQ8NFI3 743 aa9.33□□□□□ -0.92
RPH3A-223ENST00000552352 DDX11Q96FC9 970 aa9.33□□□□□ -0.92
RPH3A-223ENST00000552352 BICC1Q9H694 974 aaKnown RBP9.33□□□□□ -0.92
RPH3A-223ENST00000552352 COPRSQ9NQ92 184 aa9.33□□□□□ -0.92
RPH3A-223ENST00000552352 TJP1Q07157 1748 aa9.33□□□□□ -0.92
RPH3A-223ENST00000552352 CLCN6P51797 869 aa9.33□□□□□ -0.92
RPH3A-223ENST00000552352 CASP7P55210 303 aa9.33□□□□□ -0.92
RPH3A-223ENST00000552352 ZNF589Q86UQ0 364 aaPredicted RBP9.33□□□□□ -0.92
RPH3A-223ENST00000552352 SMARCC2Q8TAQ2 1214 aa9.33□□□□□ -0.92
RPH3A-223ENST00000552352 EAF2Q96CJ1 260 aaPredicted RBP9.33□□□□□ -0.92
RPH3A-223ENST00000552352 DNAJC2Q99543 621 aaKnown RBP9.33□□□□□ -0.92
RPH3A-223ENST00000552352 LLPHQ9BRT6 129 aaKnown RBP9.33□□□□□ -0.92
RPH3A-223ENST00000552352 TEX13AQ9BXU3 409 aaPredicted RBP9.33□□□□□ -0.92
RPH3A-223ENST00000552352 CICQ96RK0 1608 aaPredicted RBP9.33□□□□□ -0.92
RPH3A-223ENST00000552352 TAF5LO75529 589 aa9.32□□□□□ -0.92
RPH3A-223ENST00000552352 SASH1O94885 1247 aa9.32□□□□□ -0.92
RPH3A-223ENST00000552352 PNMA6AP0CW24 399 aaPredicted RBP9.32□□□□□ -0.92
RPH3A-223ENST00000552352 CEBPZQ03701 1054 aaKnown RBP9.32□□□□□ -0.92
RPH3A-223ENST00000552352 NEK1Q96PY6 1258 aa9.32□□□□□ -0.92
RPH3A-223ENST00000552352 BPIFA3Q9BQP9 254 aa9.32□□□□□ -0.92
RPH3A-223ENST00000552352 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.32□□□□□ -0.92
RPH3A-223ENST00000552352 NRDCO43847 1150 aa9.32□□□□□ -0.92
RPH3A-223ENST00000552352 HSP90B1P14625 803 aaKnown RBP9.32□□□□□ -0.92
RPH3A-223ENST00000552352 DSG3P32926 999 aa9.32□□□□□ -0.92
RPH3A-223ENST00000552352 RFX5P48382 616 aaPredicted RBP9.32□□□□□ -0.92
RPH3A-223ENST00000552352 SYT10Q6XYQ8 523 aa9.32□□□□□ -0.92
RPH3A-223ENST00000552352 ZNF396Q96N95 335 aaPredicted RBP9.32□□□□□ -0.92
RPH3A-223ENST00000552352 ARGLU1Q9NWB6 273 aaPredicted RBP9.32□□□□□ -0.92
RPH3A-223ENST00000552352 H7C1W4 665 aa9.31□□□□□ -0.92
RPH3A-223ENST00000552352 NPHP1O15259 732 aa9.31□□□□□ -0.92
RPH3A-223ENST00000552352 ZRANB2O95218 330 aaKnown RBP eCLIP9.31□□□□□ -0.92
RPH3A-223ENST00000552352 SCRN1Q12765 414 aa9.31□□□□□ -0.92
RPH3A-223ENST00000552352 AIMP1Q12904 312 aaKnown RBP9.31□□□□□ -0.92
RPH3A-223ENST00000552352 G3BP1Q13283 466 aaKnown RBP eCLIP9.31□□□□□ -0.92
RPH3A-223ENST00000552352 Q6ZUG5 572 aa9.31□□□□□ -0.92
RPH3A-223ENST00000552352 MYD88Q99836 296 aa9.31□□□□□ -0.92
RPH3A-223ENST00000552352 TSPYL1Q9H0U9 437 aa9.31□□□□□ -0.92
RPH3A-223ENST00000552352 CCDC8Q9H0W5 538 aaPredicted RBP9.31□□□□□ -0.92
RPH3A-223ENST00000552352 BOLA2Q9H3K6 86 aa9.31□□□□□ -0.92
RPH3A-223ENST00000552352 PHLPP2Q6ZVD8 1323 aa9.31□□□□□ -0.92
RPH3A-223ENST00000552352 NRAPQ86VF7 1730 aa9.31□□□□□ -0.92
RPH3A-223ENST00000552352 NBPF26B4DH59 902 aa9.31□□□□□ -0.92
RPH3A-223ENST00000552352 CCP110O43303 1012 aa9.31□□□□□ -0.92
RPH3A-223ENST00000552352 MYL6BP14649 208 aa9.31□□□□□ -0.92
RPH3A-223ENST00000552352 SFPQP23246 707 aaKnown RBP eCLIP9.31□□□□□ -0.92
RPH3A-223ENST00000552352 PLA2G4AP47712 749 aa9.31□□□□□ -0.92
RPH3A-223ENST00000552352 ARHGAP29Q52LW3 1261 aa9.31□□□□□ -0.92
RPH3A-223ENST00000552352 NBPF14Q5TI25 921 aa9.31□□□□□ -0.92
RPH3A-223ENST00000552352 ARMCX5Q6P1M9 558 aa9.31□□□□□ -0.92
RPH3A-223ENST00000552352 NBPF10Q6P3W6 841 aaKnown RBP9.31□□□□□ -0.92
RPH3A-223ENST00000552352 NBPF15Q8N660 670 aa9.31□□□□□ -0.92
RPH3A-223ENST00000552352 LRRN4CLQ8ND94 238 aa9.31□□□□□ -0.92
RPH3A-223ENST00000552352 USP28Q96RU2 1077 aa9.31□□□□□ -0.92
RPH3A-223ENST00000552352 FTOQ9C0B1 505 aaKnown RBP eCLIP9.31□□□□□ -0.92
RPH3A-223ENST00000552352 TLR7Q9NYK1 1049 aaKnown RBP9.31□□□□□ -0.92
RPH3A-223ENST00000552352 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.31□□□□□ -0.92
RPH3A-223ENST00000552352 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.31□□□□□ -0.92
RPH3A-223ENST00000552352 A0A087WWV3 80 aa9.3□□□□□ -0.92
RPH3A-223ENST00000552352 PFKFB2O60825 505 aa9.3□□□□□ -0.92
RPH3A-223ENST00000552352 EVA1CP58658 441 aa9.3□□□□□ -0.92
RPH3A-223ENST00000552352 TRIM28Q13263 835 aaKnown RBP9.3□□□□□ -0.92
RPH3A-223ENST00000552352 TEX35Q5T0J7 233 aa9.3□□□□□ -0.92
RPH3A-223ENST00000552352 FSIP1Q8NA03 581 aa9.3□□□□□ -0.92
RPH3A-223ENST00000552352 NSUN7Q8NE18 718 aaKnown RBP9.3□□□□□ -0.92
RPH3A-223ENST00000552352 CDCA7Q9BWT1 371 aaPredicted RBP9.3□□□□□ -0.92
RPH3A-223ENST00000552352 ATG3Q9NT62 314 aa9.3□□□□□ -0.92
RPH3A-223ENST00000552352 CAPN2P17655 700 aa9.3□□□□□ -0.92
RPH3A-223ENST00000552352 TPM4P67936 248 aa9.3□□□□□ -0.92
RPH3A-223ENST00000552352 TMCO3Q6UWJ1 677 aa9.3□□□□□ -0.92
RPH3A-223ENST00000552352 TMC6Q7Z403 805 aa9.3□□□□□ -0.92
RPH3A-223ENST00000552352 FMR1NBQ8N0W7 255 aaPredicted RBP9.3□□□□□ -0.92
RPH3A-223ENST00000552352 CCDC191Q8NCU4 936 aa9.3□□□□□ -0.92
RPH3A-223ENST00000552352 MRPS27Q92552 414 aaKnown RBP9.3□□□□□ -0.92
RPH3A-223ENST00000552352 SRRTQ9BXP5 876 aaKnown RBP9.3□□□□□ -0.92
RPH3A-223ENST00000552352 XPO4Q9C0E2 1151 aaKnown RBP9.3□□□□□ -0.92
RPH3A-223ENST00000552352 ORC3Q9UBD5 711 aaPredicted RBP9.3□□□□□ -0.92
RPH3A-223ENST00000552352 BCL9O00512 1426 aa9.29□□□□□ -0.92
RPH3A-223ENST00000552352 ITGB4P16144 1822 aa9.29□□□□□ -0.92
RPH3A-223ENST00000552352 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.29□□□□□ -0.92
RPH3A-223ENST00000552352 ATP8B1O43520 1251 aa9.29□□□□□ -0.92
RPH3A-223ENST00000552352 SMC2O95347 1197 aa9.29□□□□□ -0.92
RPH3A-223ENST00000552352 ME1P48163 572 aa9.29□□□□□ -0.92
RPH3A-223ENST00000552352 HNRNPH2P55795 449 aaKnown RBP9.29□□□□□ -0.92
RPH3A-223ENST00000552352 ETF1P62495 437 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms