RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 ANKRD13AQ8IZ07 590 aa16.49■□□□□ 0.23
CACNB3-221ENST00000552022 TTLL11Q8NHH1 800 aa16.49■□□□□ 0.23
CACNB3-221ENST00000552022 DPF3Q92784 378 aa16.49■□□□□ 0.23
CACNB3-221ENST00000552022 CWC25Q9NXE8 425 aaPredicted RBP16.49■□□□□ 0.23
CACNB3-221ENST00000552022 LAMA3Q16787 3333 aa16.48■□□□□ 0.23
CACNB3-221ENST00000552022 ZNF804BA4D1E1 1349 aa16.48■□□□□ 0.23
CACNB3-221ENST00000552022 AOX1Q06278 1338 aa16.48■□□□□ 0.23
CACNB3-221ENST00000552022 CTSWP56202 376 aa16.48■□□□□ 0.23
CACNB3-221ENST00000552022 GOLGA2Q08379 1002 aa16.48■□□□□ 0.23
CACNB3-221ENST00000552022 NEUROD2Q15784 382 aa16.48■□□□□ 0.23
CACNB3-221ENST00000552022 DUSP27Q5VZP5 1158 aa16.48■□□□□ 0.23
CACNB3-221ENST00000552022 CERS5Q8N5B7 392 aa16.48■□□□□ 0.23
CACNB3-221ENST00000552022 BRI3BPQ8WY22 251 aa16.48■□□□□ 0.23
CACNB3-221ENST00000552022 OPTNQ96CV9 577 aa16.48■□□□□ 0.23
CACNB3-221ENST00000552022 SHISA4Q96DD7 197 aa16.48■□□□□ 0.23
CACNB3-221ENST00000552022 GREM2Q9H772 168 aa16.48■□□□□ 0.23
CACNB3-221ENST00000552022 ELP3Q9H9T3 547 aa16.48■□□□□ 0.23
CACNB3-221ENST00000552022 LEMD3Q9Y2U8 911 aa16.48■□□□□ 0.23
CACNB3-221ENST00000552022 CLRN2A0PK11 232 aa16.47■□□□□ 0.23
CACNB3-221ENST00000552022 TAF1CQ15572 869 aaPredicted RBP16.47■□□□□ 0.23
CACNB3-221ENST00000552022 PRMT6Q96LA8 375 aaPredicted RBP16.47■□□□□ 0.23
CACNB3-221ENST00000552022 ARHGAP39Q9C0H5 1083 aa16.47■□□□□ 0.23
CACNB3-221ENST00000552022 ZFYVE28Q9HCC9 887 aa16.47■□□□□ 0.23
CACNB3-221ENST00000552022 TRIM35Q9UPQ4 493 aa16.47■□□□□ 0.23
CACNB3-221ENST00000552022 CNKSR2Q8WXI2 1034 aa16.46■□□□□ 0.23
CACNB3-221ENST00000552022 SPDYE2BA6NHP3 402 aa16.45■□□□□ 0.22
CACNB3-221ENST00000552022 SPDYE6P0CI01 402 aa16.45■□□□□ 0.22
CACNB3-221ENST00000552022 MTFR1Q15390 333 aa16.45■□□□□ 0.22
CACNB3-221ENST00000552022 FAM43AQ8N2R8 423 aa16.45■□□□□ 0.22
CACNB3-221ENST00000552022 METTL22Q9BUU2 404 aaPredicted RBP16.45■□□□□ 0.22
CACNB3-221ENST00000552022 VEZTQ9HBM0 779 aa16.45■□□□□ 0.22
CACNB3-221ENST00000552022 CD209Q9NNX6 404 aa16.45■□□□□ 0.22
CACNB3-221ENST00000552022 CCL15-CCL14A0A0B4J2E2 113 aa16.44■□□□□ 0.22
CACNB3-221ENST00000552022 RASA3Q14644 834 aa16.44■□□□□ 0.22
CACNB3-221ENST00000552022 CCL15Q16663 113 aa16.44■□□□□ 0.22
CACNB3-221ENST00000552022 CFAP100Q494V2 611 aa16.44■□□□□ 0.22
CACNB3-221ENST00000552022 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.44■□□□□ 0.22
CACNB3-221ENST00000552022 UBE2Q1Q7Z7E8 422 aa16.44■□□□□ 0.22
CACNB3-221ENST00000552022 F8W031 263 aaPredicted RBP16.43■□□□□ 0.22
CACNB3-221ENST00000552022 SOX1O00570 391 aaPredicted RBP16.43■□□□□ 0.22
CACNB3-221ENST00000552022 MYO1BO43795 1136 aa16.43■□□□□ 0.22
CACNB3-221ENST00000552022 LACTBP83111 547 aaPredicted RBP16.43■□□□□ 0.22
CACNB3-221ENST00000552022 MNX1P50219 401 aaPredicted RBP16.42■□□□□ 0.22
CACNB3-221ENST00000552022 GTF2A2P52657 109 aa16.42■□□□□ 0.22
CACNB3-221ENST00000552022 CCDC146Q8IYE0 955 aa16.42■□□□□ 0.22
CACNB3-221ENST00000552022 ANKRD2Q9GZV1 360 aa16.42■□□□□ 0.22
CACNB3-221ENST00000552022 IRS2Q9Y4H2 1338 aa16.42■□□□□ 0.22
CACNB3-221ENST00000552022 TLR2O60603 784 aa16.41■□□□□ 0.22
CACNB3-221ENST00000552022 IGKV5-2P06315 115 aa16.41■□□□□ 0.22
CACNB3-221ENST00000552022 CDAN1Q8IWY9 1227 aa16.41■□□□□ 0.22
CACNB3-221ENST00000552022 MBIPQ9NS73 344 aa16.41■□□□□ 0.22
CACNB3-221ENST00000552022 SNAP23O00161 211 aa16.4■□□□□ 0.22
CACNB3-221ENST00000552022 GNRH1P01148 92 aa16.4■□□□□ 0.22
CACNB3-221ENST00000552022 IGHMBP2P38935 993 aaKnown RBP16.4■□□□□ 0.22
CACNB3-221ENST00000552022 VGLL4Q14135 290 aa16.4■□□□□ 0.22
CACNB3-221ENST00000552022 KIF22Q14807 665 aa16.4■□□□□ 0.22
CACNB3-221ENST00000552022 LRCH3Q96II8 777 aa16.4■□□□□ 0.22
CACNB3-221ENST00000552022 TEPSINQ96N21 525 aa16.4■□□□□ 0.22
CACNB3-221ENST00000552022 HTATIP2Q9BUP3 242 aa16.4■□□□□ 0.22
CACNB3-221ENST00000552022 MAP3K2Q9Y2U5 619 aa16.4■□□□□ 0.22
CACNB3-221ENST00000552022 UNC80Q8N2C7 3258 aa16.39■□□□□ 0.21
CACNB3-221ENST00000552022 ELL2O00472 640 aaPredicted RBP16.39■□□□□ 0.21
CACNB3-221ENST00000552022 ZBTB7BO15156 539 aaPredicted RBP16.39■□□□□ 0.21
CACNB3-221ENST00000552022 CTGFP29279 349 aa16.39■□□□□ 0.21
CACNB3-221ENST00000552022 GJA8P48165 433 aa16.39■□□□□ 0.21
CACNB3-221ENST00000552022 PRMT2P55345 433 aa16.39■□□□□ 0.21
CACNB3-221ENST00000552022 MAP3K9P80192 1104 aa16.39■□□□□ 0.21
CACNB3-221ENST00000552022 A0A1B0GUL6 1792 aa16.38■□□□□ 0.21
CACNB3-221ENST00000552022 A0A1W2PPC1 479 aa16.38■□□□□ 0.21
CACNB3-221ENST00000552022 ECM2O94769 699 aaPredicted RBP16.38■□□□□ 0.21
CACNB3-221ENST00000552022 RBM5P52756 815 aaKnown RBP eCLIP16.38■□□□□ 0.21
CACNB3-221ENST00000552022 FKBP1AP62942 108 aaKnown RBP16.38■□□□□ 0.21
CACNB3-221ENST00000552022 CHRNDQ07001 517 aa16.38■□□□□ 0.21
CACNB3-221ENST00000552022 NKX2-3Q8TAU0 364 aa16.38■□□□□ 0.21
CACNB3-221ENST00000552022 ZNF70Q9UC06 446 aaPredicted RBP16.38■□□□□ 0.21
CACNB3-221ENST00000552022 NR2E3Q9Y5X4 410 aa16.38■□□□□ 0.21
CACNB3-221ENST00000552022 ARAP2Q8WZ64 1704 aa16.37■□□□□ 0.21
CACNB3-221ENST00000552022 DDX58O95786 925 aaKnown RBP16.37■□□□□ 0.21
CACNB3-221ENST00000552022 GJB1P08034 283 aa16.37■□□□□ 0.21
CACNB3-221ENST00000552022 IL1R1P14778 569 aa16.37■□□□□ 0.21
CACNB3-221ENST00000552022 ITGA6P23229 1130 aa16.37■□□□□ 0.21
CACNB3-221ENST00000552022 KCNJ4P48050 445 aa16.37■□□□□ 0.21
CACNB3-221ENST00000552022 SPDYE2Q495Y8 402 aa16.37■□□□□ 0.21
CACNB3-221ENST00000552022 C15orf52Q6ZUT6 534 aaKnown RBP16.37■□□□□ 0.21
CACNB3-221ENST00000552022 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.37■□□□□ 0.21
CACNB3-221ENST00000552022 MPHOSPH8Q99549 860 aa16.37■□□□□ 0.21
CACNB3-221ENST00000552022 JAG2Q9Y219 1238 aa16.37■□□□□ 0.21
CACNB3-221ENST00000552022 BTBD19C9JJ37 291 aa16.36■□□□□ 0.21
CACNB3-221ENST00000552022 H7C1W4 665 aa16.36■□□□□ 0.21
CACNB3-221ENST00000552022 TAF5LO75529 589 aa16.36■□□□□ 0.21
CACNB3-221ENST00000552022 ZNF853P0CG23 659 aa16.36■□□□□ 0.21
CACNB3-221ENST00000552022 CCL5P13501 91 aa16.36■□□□□ 0.21
CACNB3-221ENST00000552022 TNFAIP1Q13829 316 aa16.36■□□□□ 0.21
CACNB3-221ENST00000552022 CWF19L2Q2TBE0 894 aaKnown RBP16.36■□□□□ 0.21
CACNB3-221ENST00000552022 TRIM47Q96LD4 638 aa16.36■□□□□ 0.21
CACNB3-221ENST00000552022 TDRD3Q9H7E2 651 aaKnown RBP16.36■□□□□ 0.21
CACNB3-221ENST00000552022 ZCCHC17Q9NP64 241 aaKnown RBP16.36■□□□□ 0.21
CACNB3-221ENST00000552022 SRRDQ9UH36 339 aa16.36■□□□□ 0.21
CACNB3-221ENST00000552022 ALPK3Q96L96 1907 aa16.35■□□□□ 0.21
CACNB3-221ENST00000552022 PI4KAP2A4QPH2 592 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms