RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 IQCB1Q15051 598 aa15.24■□□□□ 0.03
CACNB3-219ENST00000551544 BRINP3Q76B58 766 aa15.24■□□□□ 0.03
CACNB3-219ENST00000551544 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.24■□□□□ 0.03
CACNB3-219ENST00000551544 SYNE4Q8N205 404 aa15.24■□□□□ 0.03
CACNB3-219ENST00000551544 NUP188Q5SRE5 1749 aa15.24■□□□□ 0.03
CACNB3-219ENST00000551544 KLF18A0A0U1RQI7 1052 aa15.24■□□□□ 0.03
CACNB3-219ENST00000551544 BECN2A8MW95 431 aa15.24■□□□□ 0.03
CACNB3-219ENST00000551544 POLR3DP05423 398 aaPredicted RBP15.24■□□□□ 0.03
CACNB3-219ENST00000551544 FAM160A1Q05DH4 1040 aa15.24■□□□□ 0.03
CACNB3-219ENST00000551544 NKX1-1Q15270 411 aaPredicted RBP15.24■□□□□ 0.03
CACNB3-219ENST00000551544 GOLGA8BA8MQT2 603 aa15.23■□□□□ 0.03
CACNB3-219ENST00000551544 RIOK3O14730 519 aaKnown RBP15.23■□□□□ 0.03
CACNB3-219ENST00000551544 CCDC144BQ3MJ40 725 aa15.23■□□□□ 0.03
CACNB3-219ENST00000551544 ATL3Q6DD88 541 aa15.23■□□□□ 0.03
CACNB3-219ENST00000551544 CCDC144CPQ8IYA2 1237 aa15.23■□□□□ 0.03
CACNB3-219ENST00000551544 ZNF710Q8N1W2 664 aa15.23■□□□□ 0.03
CACNB3-219ENST00000551544 TMOD3Q9NYL9 352 aa15.23■□□□□ 0.03
CACNB3-219ENST00000551544 TAOK2Q9UL54 1235 aa15.23■□□□□ 0.03
CACNB3-219ENST00000551544 PCDHA7Q9UN72 937 aa15.23■□□□□ 0.03
CACNB3-219ENST00000551544 STRCP1A6NGW2 1772 aa15.23■□□□□ 0.03
CACNB3-219ENST00000551544 ZFYP08048 801 aaPredicted RBP15.23■□□□□ 0.03
CACNB3-219ENST00000551544 KIF6Q6ZMV9 814 aa15.23■□□□□ 0.03
CACNB3-219ENST00000551544 DNAJC10Q8IXB1 793 aa15.23■□□□□ 0.03
CACNB3-219ENST00000551544 ENGASEQ8NFI3 743 aa15.23■□□□□ 0.03
CACNB3-219ENST00000551544 C8orf76Q96K31 380 aa15.23■□□□□ 0.03
CACNB3-219ENST00000551544 PARP4Q9UKK3 1724 aaKnown RBP15.23■□□□□ 0.03
CACNB3-219ENST00000551544 A0A1B0GVL5 298 aa15.22■□□□□ 0.03
CACNB3-219ENST00000551544 GPTP24298 496 aa15.22■□□□□ 0.03
CACNB3-219ENST00000551544 EVA1CP58658 441 aa15.22■□□□□ 0.03
CACNB3-219ENST00000551544 SF3A1Q15459 793 aaKnown RBP15.22■□□□□ 0.03
CACNB3-219ENST00000551544 RALYLQ86SE5 291 aaKnown RBP15.22■□□□□ 0.03
CACNB3-219ENST00000551544 CACTINQ8WUQ7 758 aaKnown RBP15.22■□□□□ 0.03
CACNB3-219ENST00000551544 APPBP2Q92624 585 aa15.22■□□□□ 0.03
CACNB3-219ENST00000551544 CHMP4CQ96CF2 233 aa15.22■□□□□ 0.03
CACNB3-219ENST00000551544 C16orf45Q96MC5 204 aaPredicted RBP15.22■□□□□ 0.03
CACNB3-219ENST00000551544 GJB4Q9NTQ9 266 aa15.22■□□□□ 0.03
CACNB3-219ENST00000551544 CPLX1O14810 134 aa15.22■□□□□ 0.03
CACNB3-219ENST00000551544 METTL24Q5JXM2 366 aa15.22■□□□□ 0.03
CACNB3-219ENST00000551544 SDF4Q9BRK5 362 aa15.22■□□□□ 0.03
CACNB3-219ENST00000551544 ORC3Q9UBD5 711 aaPredicted RBP15.22■□□□□ 0.03
CACNB3-219ENST00000551544 ASAP1Q9ULH1 1129 aa15.22■□□□□ 0.03
CACNB3-219ENST00000551544 GPAA1O43292 621 aa15.21■□□□□ 0.03
CACNB3-219ENST00000551544 DMTNQ08495 405 aa15.21■□□□□ 0.03
CACNB3-219ENST00000551544 STK38Q15208 465 aa15.21■□□□□ 0.03
CACNB3-219ENST00000551544 CLIC4Q9Y696 253 aa15.21■□□□□ 0.03
CACNB3-219ENST00000551544 ZNF213O14771 459 aa15.21■□□□□ 0.03
CACNB3-219ENST00000551544 PCCAP05165 728 aaPredicted RBP15.21■□□□□ 0.03
CACNB3-219ENST00000551544 HSPA2P54652 639 aa15.21■□□□□ 0.03
CACNB3-219ENST00000551544 ATP2B3Q16720 1220 aa15.21■□□□□ 0.03
CACNB3-219ENST00000551544 MB21D2Q8IYB1 491 aaPredicted RBP15.21■□□□□ 0.03
CACNB3-219ENST00000551544 NCOA7Q8NI08 942 aa15.21■□□□□ 0.03
CACNB3-219ENST00000551544 MRPS27Q92552 414 aaKnown RBP15.21■□□□□ 0.03
CACNB3-219ENST00000551544 CARD10Q9BWT7 1032 aa15.21■□□□□ 0.03
CACNB3-219ENST00000551544 BCL2L12Q9HB09 334 aa15.21■□□□□ 0.03
CACNB3-219ENST00000551544 ANO10Q9NW15 660 aa15.21■□□□□ 0.03
CACNB3-219ENST00000551544 EVCP57679 992 aa15.21■□□□□ 0.02
CACNB3-219ENST00000551544 ANTXR2P58335 489 aa15.21■□□□□ 0.02
CACNB3-219ENST00000551544 LDHAL6AQ6ZMR3 332 aa15.21■□□□□ 0.02
CACNB3-219ENST00000551544 RTEL1Q9NZ71 1219 aa15.21■□□□□ 0.02
CACNB3-219ENST00000551544 HPS5Q9UPZ3 1129 aa15.21■□□□□ 0.02
CACNB3-219ENST00000551544 COL5A2P05997 1499 aaPredicted RBP15.2■□□□□ 0.02
CACNB3-219ENST00000551544 DHX16O60231 1041 aaKnown RBP15.2■□□□□ 0.02
CACNB3-219ENST00000551544 ARID5BQ14865 1188 aa15.2■□□□□ 0.02
CACNB3-219ENST00000551544 ZBTB38Q8NAP3 1195 aaPredicted RBP15.2■□□□□ 0.02
CACNB3-219ENST00000551544 NDUFA8P51970 172 aa15.2■□□□□ 0.02
CACNB3-219ENST00000551544 DHX40Q8IX18 779 aaKnown RBP15.2■□□□□ 0.02
CACNB3-219ENST00000551544 FBXL16Q8N461 479 aa15.2■□□□□ 0.02
CACNB3-219ENST00000551544 FBXO3Q9UK99 471 aa15.2■□□□□ 0.02
CACNB3-219ENST00000551544 UBR2Q8IWV8 1755 aa15.19■□□□□ 0.02
CACNB3-219ENST00000551544 MCAMP43121 646 aa15.19■□□□□ 0.02
CACNB3-219ENST00000551544 HLFQ16534 295 aa15.19■□□□□ 0.02
CACNB3-219ENST00000551544 ADALQ6DHV7 355 aa15.19■□□□□ 0.02
CACNB3-219ENST00000551544 SARM1Q6SZW1 724 aa15.19■□□□□ 0.02
CACNB3-219ENST00000551544 CEP57L1Q8IYX8 460 aa15.19■□□□□ 0.02
CACNB3-219ENST00000551544 FMR1NBQ8N0W7 255 aaPredicted RBP15.19■□□□□ 0.02
CACNB3-219ENST00000551544 AOPEPQ8N6M6 819 aa15.19■□□□□ 0.02
CACNB3-219ENST00000551544 LINC00301Q8NCQ3 95 aa15.19■□□□□ 0.02
CACNB3-219ENST00000551544 FBXO18Q8NFZ0 1043 aa15.19■□□□□ 0.02
CACNB3-219ENST00000551544 GREM2Q9H772 168 aa15.19■□□□□ 0.02
CACNB3-219ENST00000551544 DENND2AQ9ULE3 1009 aa15.19■□□□□ 0.02
CACNB3-219ENST00000551544 TNS2Q63HR2 1409 aa15.19■□□□□ 0.02
CACNB3-219ENST00000551544 APPP05067 770 aa15.19■□□□□ 0.02
CACNB3-219ENST00000551544 CSF1RP07333 972 aa15.19■□□□□ 0.02
CACNB3-219ENST00000551544 ZSCAN20P17040 1043 aaPredicted RBP15.19■□□□□ 0.02
CACNB3-219ENST00000551544 ITGA6P23229 1130 aa15.19■□□□□ 0.02
CACNB3-219ENST00000551544 CDC25BP30305 580 aa15.19■□□□□ 0.02
CACNB3-219ENST00000551544 TRIM28Q13263 835 aaKnown RBP15.19■□□□□ 0.02
CACNB3-219ENST00000551544 FILIP1Q7Z7B0 1213 aa15.19■□□□□ 0.02
CACNB3-219ENST00000551544 CNNM1Q9NRU3 951 aa15.19■□□□□ 0.02
CACNB3-219ENST00000551544 TPD52L1Q16890 204 aaPredicted RBP15.18■□□□□ 0.02
CACNB3-219ENST00000551544 SLC9C2Q5TAH2 1124 aa15.18■□□□□ 0.02
CACNB3-219ENST00000551544 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.18■□□□□ 0.02
CACNB3-219ENST00000551544 MYH15Q9Y2K3 1946 aa15.18■□□□□ 0.02
CACNB3-219ENST00000551544 SPEF2Q9C093 1822 aa15.18■□□□□ 0.02
CACNB3-219ENST00000551544 IDH1O75874 414 aaKnown RBP15.18■□□□□ 0.02
CACNB3-219ENST00000551544 TNNT1P13805 278 aa15.18■□□□□ 0.02
CACNB3-219ENST00000551544 ZRSR1Q15695 479 aaKnown RBP15.18■□□□□ 0.02
CACNB3-219ENST00000551544 SYNE3Q6ZMZ3 975 aa15.18■□□□□ 0.02
CACNB3-219ENST00000551544 LRRC8AQ8IWT6 810 aa15.18■□□□□ 0.02
CACNB3-219ENST00000551544 PIGBQ92521 554 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms