RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 GOLGA1Q92805 767 aa14.14□□□□□ -0.15
RAB3IP-212ENST00000550536 APBB1IPQ7Z5R6 666 aaPredicted RBP14.14□□□□□ -0.15
RAB3IP-212ENST00000550536 TUBB4AP04350 444 aa14.14□□□□□ -0.15
RAB3IP-212ENST00000550536 ATP2A2P16615 1042 aaKnown RBP14.14□□□□□ -0.15
RAB3IP-212ENST00000550536 HSP90AA4PQ58FG1 418 aa14.14□□□□□ -0.15
RAB3IP-212ENST00000550536 RGS22Q8NE09 1264 aa14.14□□□□□ -0.15
RAB3IP-212ENST00000550536 KSR2Q6VAB6 950 aa14.14□□□□□ -0.15
RAB3IP-212ENST00000550536 PUS7Q96PZ0 661 aaKnown RBP14.14□□□□□ -0.15
RAB3IP-212ENST00000550536 FBF1Q8TES7 1133 aa14.14□□□□□ -0.15
RAB3IP-212ENST00000550536 NIP7Q9Y221 180 aaKnown RBP eCLIP14.14□□□□□ -0.15
RAB3IP-212ENST00000550536 ALDH1L1O75891 902 aa14.14□□□□□ -0.15
RAB3IP-212ENST00000550536 AKAP4Q5JQC9 854 aa14.14□□□□□ -0.15
RAB3IP-212ENST00000550536 MEIS3Q99687 375 aa14.14□□□□□ -0.15
RAB3IP-212ENST00000550536 FRMD4BQ9Y2L6 1034 aa14.14□□□□□ -0.15
RAB3IP-212ENST00000550536 ADAMTS12P58397 1594 aa14.13□□□□□ -0.15
RAB3IP-212ENST00000550536 SPTLC2O15270 562 aa14.13□□□□□ -0.15
RAB3IP-212ENST00000550536 IGHDP01880 384 aa14.13□□□□□ -0.15
RAB3IP-212ENST00000550536 BRAPQ7Z569 592 aa14.13□□□□□ -0.15
RAB3IP-212ENST00000550536 TMEM110-MUSTN1A8MSY1 372 aa14.13□□□□□ -0.15
RAB3IP-212ENST00000550536 MCM7P33993 719 aa14.13□□□□□ -0.15
RAB3IP-212ENST00000550536 MAK16Q9BXY0 300 aaKnown RBP14.13□□□□□ -0.15
RAB3IP-212ENST00000550536 FLT4P35916 1363 aa14.13□□□□□ -0.15
RAB3IP-212ENST00000550536 F13A1P00488 732 aa14.13□□□□□ -0.15
RAB3IP-212ENST00000550536 COPS6Q7L5N1 327 aa14.13□□□□□ -0.15
RAB3IP-212ENST00000550536 CCDC63Q8NA47 563 aa14.13□□□□□ -0.15
RAB3IP-212ENST00000550536 CHRNA2Q15822 529 aa14.12□□□□□ -0.15
RAB3IP-212ENST00000550536 MCM6Q14566 821 aa14.12□□□□□ -0.15
RAB3IP-212ENST00000550536 CCDC129Q6ZRS4 1044 aa14.12□□□□□ -0.15
RAB3IP-212ENST00000550536 SERPINA10Q9UK55 444 aa14.12□□□□□ -0.15
RAB3IP-212ENST00000550536 GAS8O95995 478 aa14.12□□□□□ -0.15
RAB3IP-212ENST00000550536 CCDC6Q16204 474 aa14.12□□□□□ -0.15
RAB3IP-212ENST00000550536 ZMYM4Q5VZL5 1548 aa14.12□□□□□ -0.15
RAB3IP-212ENST00000550536 TXNDC16Q9P2K2 825 aa14.12□□□□□ -0.15
RAB3IP-212ENST00000550536 DTHD1Q6ZMT9 781 aa14.12□□□□□ -0.15
RAB3IP-212ENST00000550536 WDR62O43379 1518 aa14.12□□□□□ -0.15
RAB3IP-212ENST00000550536 DNM1Q05193 864 aaKnown RBP14.12□□□□□ -0.15
RAB3IP-212ENST00000550536 DPH6Q7L8W6 267 aa14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 HS2ST1Q7LGA3 356 aa14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 ANKRD44Q8N8A2 993 aa14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 IQSEC3Q9UPP2 1182 aaPredicted RBP14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 ACSBG1Q96GR2 724 aa14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 TCHPQ9BT92 498 aa14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 MCM9Q9NXL9 1143 aa14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 DHX58Q96C10 678 aa14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 RNF216Q9NWF9 866 aaPredicted RBP14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 NMIQ13287 307 aaPredicted RBP14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 SIRT1Q96EB6 747 aa14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 CCDC42Q96M95 316 aa14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 TYRO3Q06418 890 aa14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 DNAI1Q9UI46 699 aa14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 ANXA1P04083 346 aa14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 MAP7D1Q3KQU3 841 aa14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 SMC6Q96SB8 1091 aa14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 ZBTB16Q05516 673 aa14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 KRT79Q5XKE5 535 aa14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 TTC16Q8NEE8 873 aa14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 VEZTQ9HBM0 779 aa14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 RUFY3Q7L099 469 aa14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 ZFP91Q96JP5 570 aaPredicted RBP14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 ANKRD2Q9GZV1 360 aa14.11□□□□□ -0.15
RAB3IP-212ENST00000550536 LDHBP07195 334 aaKnown RBP14.1□□□□□ -0.15
RAB3IP-212ENST00000550536 CEBPAP49715 358 aaPredicted RBP14.1□□□□□ -0.15
RAB3IP-212ENST00000550536 MNAT1P51948 309 aa14.1□□□□□ -0.15
RAB3IP-212ENST00000550536 KIAA1524Q8TCG1 905 aa14.1□□□□□ -0.15
RAB3IP-212ENST00000550536 FAM212AQ96EL1 285 aa14.1□□□□□ -0.15
RAB3IP-212ENST00000550536 MAPKBP1O60336 1514 aa14.1□□□□□ -0.15
RAB3IP-212ENST00000550536 SOS1Q07889 1333 aaPredicted RBP14.1□□□□□ -0.15
RAB3IP-212ENST00000550536 PCDH11XQ9BZA7 1347 aa14.1□□□□□ -0.15
RAB3IP-212ENST00000550536 PCDH11YQ9BZA8 1340 aa14.1□□□□□ -0.15
RAB3IP-212ENST00000550536 GJC1P36383 396 aa14.1□□□□□ -0.15
RAB3IP-212ENST00000550536 SNX16P57768 344 aa14.1□□□□□ -0.15
RAB3IP-212ENST00000550536 TIGD1Q96MW7 591 aa14.1□□□□□ -0.15
RAB3IP-212ENST00000550536 RNF113AO15541 343 aaKnown RBP14.1□□□□□ -0.15
RAB3IP-212ENST00000550536 SNX21Q969T3 373 aa14.1□□□□□ -0.15
RAB3IP-212ENST00000550536 ATP6V0A2Q9Y487 856 aa14.1□□□□□ -0.15
RAB3IP-212ENST00000550536 ASXL2Q76L83 1435 aa14.09□□□□□ -0.15
RAB3IP-212ENST00000550536 PPP1R7Q15435 360 aa14.09□□□□□ -0.15
RAB3IP-212ENST00000550536 IL2RBP14784 551 aa14.09□□□□□ -0.15
RAB3IP-212ENST00000550536 ATP8B2P98198 1209 aa14.09□□□□□ -0.15
RAB3IP-212ENST00000550536 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.09□□□□□ -0.15
RAB3IP-212ENST00000550536 DACT1Q9NYF0 836 aa14.09□□□□□ -0.15
RAB3IP-212ENST00000550536 PARP1P09874 1014 aaKnown RBP14.09□□□□□ -0.15
RAB3IP-212ENST00000550536 PSMC4P43686 418 aa14.09□□□□□ -0.15
RAB3IP-212ENST00000550536 RTCBQ9Y3I0 505 aaKnown RBP14.09□□□□□ -0.15
RAB3IP-212ENST00000550536 DZIP3Q86Y13 1208 aaKnown RBP14.09□□□□□ -0.15
RAB3IP-212ENST00000550536 CAPZA3Q96KX2 299 aa14.09□□□□□ -0.15
RAB3IP-212ENST00000550536 ATL3Q6DD88 541 aa14.09□□□□□ -0.15
RAB3IP-212ENST00000550536 TPTE2Q6XPS3 522 aa14.09□□□□□ -0.15
RAB3IP-212ENST00000550536 KIFAP3Q92845 792 aa14.09□□□□□ -0.15
RAB3IP-212ENST00000550536 DNAJC25Q9H1X3 360 aa14.09□□□□□ -0.15
RAB3IP-212ENST00000550536 NDC80O14777 642 aa14.09□□□□□ -0.15
RAB3IP-212ENST00000550536 LMOD1P29536 600 aaPredicted RBP14.09□□□□□ -0.15
RAB3IP-212ENST00000550536 PLCB3Q01970 1234 aa14.09□□□□□ -0.15
RAB3IP-212ENST00000550536 ZWINTO95229 277 aa14.09□□□□□ -0.15
RAB3IP-212ENST00000550536 NOLC1Q14978 699 aaKnown RBP eCLIP14.08□□□□□ -0.15
RAB3IP-212ENST00000550536 DDB1Q16531 1140 aa14.08□□□□□ -0.15
RAB3IP-212ENST00000550536 CCDC114Q96M63 670 aa14.08□□□□□ -0.15
RAB3IP-212ENST00000550536 PLCH2O75038 1416 aa14.08□□□□□ -0.15
RAB3IP-212ENST00000550536 RPL13P26373 211 aaKnown RBP14.08□□□□□ -0.16
RAB3IP-212ENST00000550536 CEP128Q6ZU80 1094 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms