RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 COL6A3P12111 3177 aa11.56□□□□□ -0.56
UBE2N-203ENST00000549490 CLRN2A0PK11 232 aa11.56□□□□□ -0.56
UBE2N-203ENST00000549490 CERS5Q8N5B7 392 aa11.56□□□□□ -0.56
UBE2N-203ENST00000549490 TTLL11Q8NHH1 800 aa11.56□□□□□ -0.56
UBE2N-203ENST00000549490 BRI3BPQ8WY22 251 aa11.56□□□□□ -0.56
UBE2N-203ENST00000549490 OPTNQ96CV9 577 aa11.56□□□□□ -0.56
UBE2N-203ENST00000549490 SHISA4Q96DD7 197 aa11.56□□□□□ -0.56
UBE2N-203ENST00000549490 GREM2Q9H772 168 aa11.56□□□□□ -0.56
UBE2N-203ENST00000549490 ELP3Q9H9T3 547 aa11.56□□□□□ -0.56
UBE2N-203ENST00000549490 ZFYVE28Q9HCC9 887 aa11.56□□□□□ -0.56
UBE2N-203ENST00000549490 RASA3Q14644 834 aa11.55□□□□□ -0.56
UBE2N-203ENST00000549490 TAF1CQ15572 869 aaPredicted RBP11.55□□□□□ -0.56
UBE2N-203ENST00000549490 NEUROD2Q15784 382 aa11.55□□□□□ -0.56
UBE2N-203ENST00000549490 CNKSR2Q8WXI2 1034 aa11.55□□□□□ -0.56
UBE2N-203ENST00000549490 PRMT6Q96LA8 375 aaPredicted RBP11.55□□□□□ -0.56
UBE2N-203ENST00000549490 ARHGAP39Q9C0H5 1083 aa11.55□□□□□ -0.56
UBE2N-203ENST00000549490 VEZTQ9HBM0 779 aa11.55□□□□□ -0.56
UBE2N-203ENST00000549490 TRIM35Q9UPQ4 493 aa11.55□□□□□ -0.56
UBE2N-203ENST00000549490 AOX1Q06278 1338 aa11.55□□□□□ -0.56
UBE2N-203ENST00000549490 CCL15-CCL14A0A0B4J2E2 113 aa11.54□□□□□ -0.56
UBE2N-203ENST00000549490 SPDYE2BA6NHP3 402 aa11.54□□□□□ -0.56
UBE2N-203ENST00000549490 SPDYE6P0CI01 402 aa11.54□□□□□ -0.56
UBE2N-203ENST00000549490 MTFR1Q15390 333 aa11.54□□□□□ -0.56
UBE2N-203ENST00000549490 CCL15Q16663 113 aa11.54□□□□□ -0.56
UBE2N-203ENST00000549490 CFAP100Q494V2 611 aa11.54□□□□□ -0.56
UBE2N-203ENST00000549490 FAM43AQ8N2R8 423 aa11.54□□□□□ -0.56
UBE2N-203ENST00000549490 METTL22Q9BUU2 404 aaPredicted RBP11.54□□□□□ -0.56
UBE2N-203ENST00000549490 CD209Q9NNX6 404 aa11.54□□□□□ -0.56
UBE2N-203ENST00000549490 ZNF646O15015 1829 aaPredicted RBP11.53□□□□□ -0.56
UBE2N-203ENST00000549490 F8W031 263 aaPredicted RBP11.53□□□□□ -0.56
UBE2N-203ENST00000549490 MYO1BO43795 1136 aa11.53□□□□□ -0.56
UBE2N-203ENST00000549490 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.53□□□□□ -0.56
UBE2N-203ENST00000549490 UBE2Q1Q7Z7E8 422 aa11.53□□□□□ -0.56
UBE2N-203ENST00000549490 SOX1O00570 391 aaPredicted RBP11.52□□□□□ -0.57
UBE2N-203ENST00000549490 IGHMBP2P38935 993 aaKnown RBP11.52□□□□□ -0.57
UBE2N-203ENST00000549490 MNX1P50219 401 aaPredicted RBP11.52□□□□□ -0.57
UBE2N-203ENST00000549490 GTF2A2P52657 109 aa11.52□□□□□ -0.57
UBE2N-203ENST00000549490 LACTBP83111 547 aaPredicted RBP11.52□□□□□ -0.57
UBE2N-203ENST00000549490 ANKRD2Q9GZV1 360 aa11.52□□□□□ -0.57
UBE2N-203ENST00000549490 SNAP23O00161 211 aa11.51□□□□□ -0.57
UBE2N-203ENST00000549490 ZBTB7BO15156 539 aaPredicted RBP11.51□□□□□ -0.57
UBE2N-203ENST00000549490 TLR2O60603 784 aa11.51□□□□□ -0.57
UBE2N-203ENST00000549490 IGKV5-2P06315 115 aa11.51□□□□□ -0.57
UBE2N-203ENST00000549490 PRMT2P55345 433 aa11.51□□□□□ -0.57
UBE2N-203ENST00000549490 MAP3K9P80192 1104 aa11.51□□□□□ -0.57
UBE2N-203ENST00000549490 VGLL4Q14135 290 aa11.51□□□□□ -0.57
UBE2N-203ENST00000549490 KIF22Q14807 665 aa11.51□□□□□ -0.57
UBE2N-203ENST00000549490 CDAN1Q8IWY9 1227 aa11.51□□□□□ -0.57
UBE2N-203ENST00000549490 CCDC146Q8IYE0 955 aa11.51□□□□□ -0.57
UBE2N-203ENST00000549490 LRCH3Q96II8 777 aa11.51□□□□□ -0.57
UBE2N-203ENST00000549490 HTATIP2Q9BUP3 242 aa11.51□□□□□ -0.57
UBE2N-203ENST00000549490 MBIPQ9NS73 344 aa11.51□□□□□ -0.57
UBE2N-203ENST00000549490 NR2E3Q9Y5X4 410 aa11.51□□□□□ -0.57
UBE2N-203ENST00000549490 IRS2Q9Y4H2 1338 aa11.51□□□□□ -0.57
UBE2N-203ENST00000549490 LAMA3Q16787 3333 aa11.51□□□□□ -0.57
UBE2N-203ENST00000549490 LAMB1P07942 1786 aa11.5□□□□□ -0.57
UBE2N-203ENST00000549490 GNRH1P01148 92 aa11.5□□□□□ -0.57
UBE2N-203ENST00000549490 KCNJ4P48050 445 aa11.5□□□□□ -0.57
UBE2N-203ENST00000549490 GJA8P48165 433 aa11.5□□□□□ -0.57
UBE2N-203ENST00000549490 NKX2-3Q8TAU0 364 aa11.5□□□□□ -0.57
UBE2N-203ENST00000549490 TEPSINQ96N21 525 aa11.5□□□□□ -0.57
UBE2N-203ENST00000549490 MAP3K2Q9Y2U5 619 aa11.5□□□□□ -0.57
UBE2N-203ENST00000549490 A0A1W2PPC1 479 aa11.49□□□□□ -0.57
UBE2N-203ENST00000549490 BTBD19C9JJ37 291 aa11.49□□□□□ -0.57
UBE2N-203ENST00000549490 ELL2O00472 640 aaPredicted RBP11.49□□□□□ -0.57
UBE2N-203ENST00000549490 WDHD1O75717 1129 aaPredicted RBP11.49□□□□□ -0.57
UBE2N-203ENST00000549490 ECM2O94769 699 aaPredicted RBP11.49□□□□□ -0.57
UBE2N-203ENST00000549490 DDX58O95786 925 aaKnown RBP11.49□□□□□ -0.57
UBE2N-203ENST00000549490 GJB1P08034 283 aa11.49□□□□□ -0.57
UBE2N-203ENST00000549490 CCL5P13501 91 aa11.49□□□□□ -0.57
UBE2N-203ENST00000549490 ITGA6P23229 1130 aa11.49□□□□□ -0.57
UBE2N-203ENST00000549490 CTGFP29279 349 aa11.49□□□□□ -0.57
UBE2N-203ENST00000549490 RBM5P52756 815 aaKnown RBP eCLIP11.49□□□□□ -0.57
UBE2N-203ENST00000549490 FKBP1AP62942 108 aaKnown RBP11.49□□□□□ -0.57
UBE2N-203ENST00000549490 CHRNDQ07001 517 aa11.49□□□□□ -0.57
UBE2N-203ENST00000549490 C15orf52Q6ZUT6 534 aaKnown RBP11.49□□□□□ -0.57
UBE2N-203ENST00000549490 MPHOSPH8Q99549 860 aa11.49□□□□□ -0.57
UBE2N-203ENST00000549490 ZNF70Q9UC06 446 aaPredicted RBP11.49□□□□□ -0.57
UBE2N-203ENST00000549490 JAG2Q9Y219 1238 aa11.49□□□□□ -0.57
UBE2N-203ENST00000549490 H7C1W4 665 aa11.48□□□□□ -0.57
UBE2N-203ENST00000549490 CETPP11597 493 aa11.48□□□□□ -0.57
UBE2N-203ENST00000549490 IL1R1P14778 569 aa11.48□□□□□ -0.57
UBE2N-203ENST00000549490 GRK4P32298 578 aa11.48□□□□□ -0.57
UBE2N-203ENST00000549490 TNFAIP1Q13829 316 aa11.48□□□□□ -0.57
UBE2N-203ENST00000549490 SPDYE2Q495Y8 402 aa11.48□□□□□ -0.57
UBE2N-203ENST00000549490 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.48□□□□□ -0.57
UBE2N-203ENST00000549490 TRIM47Q96LD4 638 aa11.48□□□□□ -0.57
UBE2N-203ENST00000549490 ZCCHC17Q9NP64 241 aaKnown RBP11.48□□□□□ -0.57
UBE2N-203ENST00000549490 SRRDQ9UH36 339 aa11.48□□□□□ -0.57
UBE2N-203ENST00000549490 CSADQ9Y600 493 aa11.48□□□□□ -0.57
UBE2N-203ENST00000549490 PI4KAP2A4QPH2 592 aa11.47□□□□□ -0.57
UBE2N-203ENST00000549490 SPDYE5A6NIY4 337 aa11.47□□□□□ -0.57
UBE2N-203ENST00000549490 TAF5LO75529 589 aa11.47□□□□□ -0.57
UBE2N-203ENST00000549490 ZNF853P0CG23 659 aa11.47□□□□□ -0.57
UBE2N-203ENST00000549490 PSMC4P43686 418 aa11.47□□□□□ -0.57
UBE2N-203ENST00000549490 CWF19L2Q2TBE0 894 aaKnown RBP11.47□□□□□ -0.57
UBE2N-203ENST00000549490 C17orf99Q6UX52 265 aa11.47□□□□□ -0.57
UBE2N-203ENST00000549490 KSR2Q6VAB6 950 aa11.47□□□□□ -0.57
UBE2N-203ENST00000549490 UBE3BQ7Z3V4 1068 aa11.47□□□□□ -0.57
UBE2N-203ENST00000549490 PI4KAP1Q8N8J0 262 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms