RNA–Protein interactions for RNA: ENST00000549425.5

TMEM116-207, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 3

Gene TMEM116, Length 615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-207ENST00000549425 PANK3Q9H999 370 aa11.33□□□□□ -0.6
TMEM116-207ENST00000549425 HCN4Q9Y3Q4 1203 aa11.33□□□□□ -0.6
TMEM116-207ENST00000549425 FAM205AQ6ZU69 1335 aa11.33□□□□□ -0.6
TMEM116-207ENST00000549425 COL2A1P02458 1487 aaPredicted RBP11.32□□□□□ -0.6
TMEM116-207ENST00000549425 FOSL2P15408 326 aa11.32□□□□□ -0.6
TMEM116-207ENST00000549425 CTGFP29279 349 aa11.32□□□□□ -0.6
TMEM116-207ENST00000549425 GTF2A2P52657 109 aa11.32□□□□□ -0.6
TMEM116-207ENST00000549425 SUPT20HL1Q3ZLR7 823 aa11.32□□□□□ -0.6
TMEM116-207ENST00000549425 PODNQ7Z5L7 613 aa11.32□□□□□ -0.6
TMEM116-207ENST00000549425 NLRP10Q86W26 655 aa11.32□□□□□ -0.6
TMEM116-207ENST00000549425 SLAIN1Q8ND83 568 aa11.32□□□□□ -0.6
TMEM116-207ENST00000549425 MYLIPQ8WY64 445 aa11.32□□□□□ -0.6
TMEM116-207ENST00000549425 PODXL2Q9NZ53 605 aa11.32□□□□□ -0.6
TMEM116-207ENST00000549425 PPP2R3BQ9Y5P8 575 aa11.32□□□□□ -0.6
TMEM116-207ENST00000549425 MYO3BQ8WXR4 1341 aa11.32□□□□□ -0.6
TMEM116-207ENST00000549425 DACT2Q5SW24 774 aa11.31□□□□□ -0.6
TMEM116-207ENST00000549425 ZNF428Q96B54 188 aa11.31□□□□□ -0.6
TMEM116-207ENST00000549425 ECM29Q5VYK3 1845 aa11.3□□□□□ -0.6
TMEM116-207ENST00000549425 CAPN2P17655 700 aa11.3□□□□□ -0.6
TMEM116-207ENST00000549425 PRKCZQ05513 592 aa11.3□□□□□ -0.6
TMEM116-207ENST00000549425 HSP90AB3PQ58FF7 597 aa11.3□□□□□ -0.6
TMEM116-207ENST00000549425 HELBQ8NG08 1087 aaPredicted RBP11.3□□□□□ -0.6
TMEM116-207ENST00000549425 USP2O75604 605 aaPredicted RBP11.29□□□□□ -0.6
TMEM116-207ENST00000549425 RPS8P62241 208 aaKnown RBP11.29□□□□□ -0.6
TMEM116-207ENST00000549425 NBPF12Q5TAG4 269 aaPredicted RBP11.29□□□□□ -0.6
TMEM116-207ENST00000549425 KIAA0825Q8IV33 1275 aa11.29□□□□□ -0.6
TMEM116-207ENST00000549425 MIS18AQ9NYP9 233 aa11.29□□□□□ -0.6
TMEM116-207ENST00000549425 CPA4Q9UI42 421 aa11.29□□□□□ -0.6
TMEM116-207ENST00000549425 ARIH1Q9Y4X5 557 aaPredicted RBP11.29□□□□□ -0.6
TMEM116-207ENST00000549425 ADGRA2Q96PE1 1338 aa11.29□□□□□ -0.6
TMEM116-207ENST00000549425 INHAP05111 366 aa11.28□□□□□ -0.6
TMEM116-207ENST00000549425 MDM2Q00987 491 aaPredicted RBP11.28□□□□□ -0.6
TMEM116-207ENST00000549425 DCTN1Q14203 1278 aa11.28□□□□□ -0.6
TMEM116-207ENST00000549425 SF3B3Q15393 1217 aaKnown RBP11.28□□□□□ -0.6
TMEM116-207ENST00000549425 ALYREFQ86V81 257 aaKnown RBP11.28□□□□□ -0.6
TMEM116-207ENST00000549425 PHACTR3Q96KR7 559 aa11.28□□□□□ -0.6
TMEM116-207ENST00000549425 THUMPD2Q9BTF0 503 aaKnown RBP11.28□□□□□ -0.6
TMEM116-207ENST00000549425 DDX60LQ5H9U9 1706 aaKnown RBP11.28□□□□□ -0.6
TMEM116-207ENST00000549425 NCOR1O75376 2440 aa11.28□□□□□ -0.6
TMEM116-207ENST00000549425 ZNF804BA4D1E1 1349 aa11.28□□□□□ -0.6
TMEM116-207ENST00000549425 BTBD19C9JJ37 291 aa11.27□□□□□ -0.61
TMEM116-207ENST00000549425 PRKAR2BP31323 418 aa11.27□□□□□ -0.61
TMEM116-207ENST00000549425 MMP14P50281 582 aa11.27□□□□□ -0.61
TMEM116-207ENST00000549425 C17orf99Q6UX52 265 aa11.27□□□□□ -0.61
TMEM116-207ENST00000549425 ZBED3Q96IU2 234 aaPredicted RBP11.27□□□□□ -0.61
TMEM116-207ENST00000549425 C1QTNF1Q9BXJ1 281 aa11.27□□□□□ -0.61
TMEM116-207ENST00000549425 CRISPLD2Q9H0B8 497 aa11.27□□□□□ -0.61
TMEM116-207ENST00000549425 SEMA6BQ9H3T3 888 aa11.27□□□□□ -0.61
TMEM116-207ENST00000549425 VEZTQ9HBM0 779 aa11.27□□□□□ -0.61
TMEM116-207ENST00000549425 ZCCHC17Q9NP64 241 aaKnown RBP11.27□□□□□ -0.61
TMEM116-207ENST00000549425 PAK6Q9NQU5 681 aaPredicted RBP11.27□□□□□ -0.61
TMEM116-207ENST00000549425 BDP1A6H8Y1 2624 aa11.26□□□□□ -0.61
TMEM116-207ENST00000549425 MGAMO43451 1857 aa11.26□□□□□ -0.61
TMEM116-207ENST00000549425 CLRN2A0PK11 232 aa11.26□□□□□ -0.61
TMEM116-207ENST00000549425 ADCY3O60266 1144 aa11.26□□□□□ -0.61
TMEM116-207ENST00000549425 CETPP11597 493 aa11.26□□□□□ -0.61
TMEM116-207ENST00000549425 ELNP15502 786 aa11.26□□□□□ -0.61
TMEM116-207ENST00000549425 VGLL4Q14135 290 aa11.26□□□□□ -0.61
TMEM116-207ENST00000549425 DLGAP5Q15398 846 aa11.26□□□□□ -0.61
TMEM116-207ENST00000549425 TAF7Q15545 349 aaPredicted RBP11.26□□□□□ -0.61
TMEM116-207ENST00000549425 STRIP1Q5VSL9 837 aa11.26□□□□□ -0.61
TMEM116-207ENST00000549425 ADAMTS19Q8TE59 1207 aa11.26□□□□□ -0.61
TMEM116-207ENST00000549425 NBPF3Q9H094 633 aa11.26□□□□□ -0.61
TMEM116-207ENST00000549425 KNSTRNQ9Y448 316 aa11.26□□□□□ -0.61
TMEM116-207ENST00000549425 XDHP47989 1333 aa11.26□□□□□ -0.61
TMEM116-207ENST00000549425 COL3A1P02461 1466 aaPredicted RBP11.25□□□□□ -0.61
TMEM116-207ENST00000549425 MYO1BO43795 1136 aa11.25□□□□□ -0.61
TMEM116-207ENST00000549425 FCGRTP55899 365 aa11.25□□□□□ -0.61
TMEM116-207ENST00000549425 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.25□□□□□ -0.61
TMEM116-207ENST00000549425 ANKLE1Q8NAG6 615 aa11.25□□□□□ -0.61
TMEM116-207ENST00000549425 FAM89AQ96GI7 184 aa11.25□□□□□ -0.61
TMEM116-207ENST00000549425 UHRF1Q96T88 793 aaPredicted RBP11.25□□□□□ -0.61
TMEM116-207ENST00000549425 C11orf49Q9H6J7 331 aa11.25□□□□□ -0.61
TMEM116-207ENST00000549425 GABRQQ9UN88 632 aa11.25□□□□□ -0.61
TMEM116-207ENST00000549425 CSADQ9Y600 493 aa11.25□□□□□ -0.61
TMEM116-207ENST00000549425 ATP2B4P23634 1241 aa11.24□□□□□ -0.61
TMEM116-207ENST00000549425 RTL5Q5HYW3 569 aaPredicted RBP11.24□□□□□ -0.61
TMEM116-207ENST00000549425 USP38Q8NB14 1042 aa11.24□□□□□ -0.61
TMEM116-207ENST00000549425 MED23Q9ULK4 1368 aa11.24□□□□□ -0.61
TMEM116-207ENST00000549425 MUC6Q6W4X9 2439 aa11.23□□□□□ -0.61
TMEM116-207ENST00000549425 ANXA1P04083 346 aa11.23□□□□□ -0.61
TMEM116-207ENST00000549425 EIF4A1P60842 406 aaKnown RBP11.23□□□□□ -0.61
TMEM116-207ENST00000549425 AIMP1Q12904 312 aaKnown RBP11.23□□□□□ -0.61
TMEM116-207ENST00000549425 LRP10Q7Z4F1 713 aa11.23□□□□□ -0.61
TMEM116-207ENST00000549425 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.23□□□□□ -0.61
TMEM116-207ENST00000549425 TTYH1Q9H313 450 aaPredicted RBP11.23□□□□□ -0.61
TMEM116-207ENST00000549425 SEC31BQ9NQW1 1179 aa11.23□□□□□ -0.61
TMEM116-207ENST00000549425 SPDYE5A6NIY4 337 aa11.22□□□□□ -0.61
TMEM116-207ENST00000549425 SNAPC2Q13487 334 aa11.22□□□□□ -0.61
TMEM116-207ENST00000549425 RASA3Q14644 834 aa11.22□□□□□ -0.61
TMEM116-207ENST00000549425 PROSER3Q2NL68 480 aa11.22□□□□□ -0.61
TMEM116-207ENST00000549425 TTLL5Q6EMB2 1281 aa11.22□□□□□ -0.61
TMEM116-207ENST00000549425 IL27Q8NEV9 243 aa11.22□□□□□ -0.61
TMEM116-207ENST00000549425 PNISRQ8TF01 805 aaKnown RBP11.22□□□□□ -0.61
TMEM116-207ENST00000549425 TAOK2Q9UL54 1235 aa11.22□□□□□ -0.61
TMEM116-207ENST00000549425 PCDHAC2Q9Y5I4 1007 aa11.22□□□□□ -0.61
TMEM116-207ENST00000549425 FLT3LGP49771 235 aa11.21□□□□□ -0.61
TMEM116-207ENST00000549425 MAP3K9P80192 1104 aa11.21□□□□□ -0.61
TMEM116-207ENST00000549425 COPS6Q7L5N1 327 aa11.21□□□□□ -0.61
TMEM116-207ENST00000549425 PXYLP1Q8TE99 480 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms