RNA–Protein interactions for RNA: ENST00000549237.5

USP15-212, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 791 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-212ENST00000549237 PRKRIP1Q9H875 184 aaPredicted RBP8.47□□□□□ -1.05
USP15-212ENST00000549237 UTRNP46939 3433 aa8.46□□□□□ -1.05
USP15-212ENST00000549237 GNAT3A8MTJ3 354 aa8.46□□□□□ -1.06
USP15-212ENST00000549237 FOXK2Q01167 660 aa8.46□□□□□ -1.06
USP15-212ENST00000549237 PTK2Q05397 1052 aa8.46□□□□□ -1.06
USP15-212ENST00000549237 DCTN1Q14203 1278 aa8.46□□□□□ -1.06
USP15-212ENST00000549237 GAS2L2Q8NHY3 880 aa8.46□□□□□ -1.06
USP15-212ENST00000549237 LRRN4Q8WUT4 740 aa8.46□□□□□ -1.06
USP15-212ENST00000549237 ZNF395Q9H8N7 513 aaPredicted RBP8.46□□□□□ -1.06
USP15-212ENST00000549237 NUDCQ9Y266 331 aa8.46□□□□□ -1.06
USP15-212ENST00000549237 MYBBP1AQ9BQG0 1328 aaKnown RBP8.46□□□□□ -1.06
USP15-212ENST00000549237 SENP3-EIF4A1A0A087X0R7 540 aa8.45□□□□□ -1.06
USP15-212ENST00000549237 KCNQ3O43525 872 aa8.45□□□□□ -1.06
USP15-212ENST00000549237 CCDC184Q52MB2 194 aa8.45□□□□□ -1.06
USP15-212ENST00000549237 MSL1Q68DK7 614 aa8.45□□□□□ -1.06
USP15-212ENST00000549237 MCM10Q7L590 875 aa8.45□□□□□ -1.06
USP15-212ENST00000549237 KDM3BQ7LBC6 1761 aa8.45□□□□□ -1.06
USP15-212ENST00000549237 ADH1AP07327 375 aa8.44□□□□□ -1.06
USP15-212ENST00000549237 NR6A1Q15406 480 aa8.44□□□□□ -1.06
USP15-212ENST00000549237 INTS5Q6P9B9 1019 aaKnown RBP8.44□□□□□ -1.06
USP15-212ENST00000549237 DNAJC10Q8IXB1 793 aa8.44□□□□□ -1.06
USP15-212ENST00000549237 FHDC1Q9C0D6 1143 aaPredicted RBP8.44□□□□□ -1.06
USP15-212ENST00000549237 GPSM3Q9Y4H4 160 aa8.44□□□□□ -1.06
USP15-212ENST00000549237 CNTNAP4Q9C0A0 1308 aa8.44□□□□□ -1.06
USP15-212ENST00000549237 SSFA2P28290 1259 aa8.43□□□□□ -1.06
USP15-212ENST00000549237 CRKLP46109 303 aaKnown RBP8.43□□□□□ -1.06
USP15-212ENST00000549237 RAB15P59190 212 aa8.43□□□□□ -1.06
USP15-212ENST00000549237 SRSF11Q05519 484 aaKnown RBP8.43□□□□□ -1.06
USP15-212ENST00000549237 ZNF784Q8NCA9 323 aaPredicted RBP8.43□□□□□ -1.06
USP15-212ENST00000549237 PNMA1Q8ND90 353 aa8.43□□□□□ -1.06
USP15-212ENST00000549237 ADAM32Q8TC27 787 aa8.43□□□□□ -1.06
USP15-212ENST00000549237 ZNF496Q96IT1 587 aaPredicted RBP8.43□□□□□ -1.06
USP15-212ENST00000549237 ARXQ96QS3 562 aa8.43□□□□□ -1.06
USP15-212ENST00000549237 PPP1R1BQ9UD71 204 aaPredicted RBP8.43□□□□□ -1.06
USP15-212ENST00000549237 GOLGB1Q14789 3259 aaKnown RBP8.43□□□□□ -1.06
USP15-212ENST00000549237 KIAA1551Q9HCM1 1747 aa8.43□□□□□ -1.06
USP15-212ENST00000549237 PRAMEF22A3QJZ6 481 aa8.42□□□□□ -1.06
USP15-212ENST00000549237 RPS6KA4O75676 772 aa8.42□□□□□ -1.06
USP15-212ENST00000549237 CYP19A1P11511 503 aaPredicted RBP8.42□□□□□ -1.06
USP15-212ENST00000549237 ZNF790Q6PG37 636 aa8.42□□□□□ -1.06
USP15-212ENST00000549237 SYT17Q9BSW7 474 aa8.42□□□□□ -1.06
USP15-212ENST00000549237 THUMPD2Q9BTF0 503 aaKnown RBP8.42□□□□□ -1.06
USP15-212ENST00000549237 ENAMQ9NRM1 1142 aa8.42□□□□□ -1.06
USP15-212ENST00000549237 TMPRSS4Q9NRS4 437 aa8.42□□□□□ -1.06
USP15-212ENST00000549237 KIF13BQ9NQT8 1826 aa8.42□□□□□ -1.06
USP15-212ENST00000549237 AFDNP55196 1824 aaKnown RBP8.41□□□□□ -1.06
USP15-212ENST00000549237 HEG1Q9ULI3 1381 aa8.41□□□□□ -1.06
USP15-212ENST00000549237 TEFQ10587 303 aa8.41□□□□□ -1.06
USP15-212ENST00000549237 NFE2L2Q16236 605 aa8.41□□□□□ -1.06
USP15-212ENST00000549237 FOXD4L5Q5VV16 416 aaPredicted RBP8.41□□□□□ -1.06
USP15-212ENST00000549237 LYPD4Q6UWN0 246 aa8.41□□□□□ -1.06
USP15-212ENST00000549237 LYSMD3Q7Z3D4 306 aa8.41□□□□□ -1.06
USP15-212ENST00000549237 CCDC146Q8IYE0 955 aa8.41□□□□□ -1.06
USP15-212ENST00000549237 FLAD1Q8NFF5 587 aa8.41□□□□□ -1.06
USP15-212ENST00000549237 NLGN2Q8NFZ4 835 aa8.41□□□□□ -1.06
USP15-212ENST00000549237 OCSTAMPQ9BR26 566 aa8.41□□□□□ -1.06
USP15-212ENST00000549237 MIS18AQ9NYP9 233 aa8.41□□□□□ -1.06
USP15-212ENST00000549237 SRP68Q9UHB9 627 aaKnown RBP8.41□□□□□ -1.06
USP15-212ENST00000549237 ZBTB1Q9Y2K1 713 aa8.41□□□□□ -1.06
USP15-212ENST00000549237 BTBD11A6QL63 1104 aa8.4□□□□□ -1.06
USP15-212ENST00000549237 HTATSF1O43719 755 aaKnown RBP8.4□□□□□ -1.06
USP15-212ENST00000549237 GYS1P13807 737 aa8.4□□□□□ -1.06
USP15-212ENST00000549237 TRAPPC3LQ5T215 181 aa8.4□□□□□ -1.06
USP15-212ENST00000549237 SLC24A3Q9HC58 644 aa8.4□□□□□ -1.06
USP15-212ENST00000549237 RTCBQ9Y3I0 505 aaKnown RBP8.4□□□□□ -1.06
USP15-212ENST00000549237 LAMB4A4D0S4 1761 aa8.4□□□□□ -1.07
USP15-212ENST00000549237 N4BP2Q86UW6 1770 aaPredicted RBP8.4□□□□□ -1.07
USP15-212ENST00000549237 SOS1Q07889 1333 aaPredicted RBP8.39□□□□□ -1.07
USP15-212ENST00000549237 CELA2BP08218 269 aaPredicted RBP8.39□□□□□ -1.07
USP15-212ENST00000549237 TMPOP42166 694 aaKnown RBP8.39□□□□□ -1.07
USP15-212ENST00000549237 PTGIRP43119 386 aa8.39□□□□□ -1.07
USP15-212ENST00000549237 GAS6Q14393 721 aa8.39□□□□□ -1.07
USP15-212ENST00000549237 DZIP3Q86Y13 1208 aaKnown RBP8.39□□□□□ -1.07
USP15-212ENST00000549237 RTF1Q92541 710 aaKnown RBP8.39□□□□□ -1.07
USP15-212ENST00000549237 CCDC87Q9NVE4 849 aa8.39□□□□□ -1.07
USP15-212ENST00000549237 RRP7AQ9Y3A4 280 aaKnown RBP8.39□□□□□ -1.07
USP15-212ENST00000549237 USP16Q9Y5T5 823 aa8.39□□□□□ -1.07
USP15-212ENST00000549237 BCORQ6W2J9 1755 aa8.38□□□□□ -1.07
USP15-212ENST00000549237 USP42Q9H9J4 1324 aaKnown RBP8.38□□□□□ -1.07
USP15-212ENST00000549237 SCN7AQ01118 1682 aa8.38□□□□□ -1.07
USP15-212ENST00000549237 ERVH48-1M5A8F1 160 aa8.38□□□□□ -1.07
USP15-212ENST00000549237 A1BGP04217 495 aa8.38□□□□□ -1.07
USP15-212ENST00000549237 HMGB2P26583 209 aaKnown RBP8.38□□□□□ -1.07
USP15-212ENST00000549237 POLD1P28340 1107 aa8.38□□□□□ -1.07
USP15-212ENST00000549237 PIP4K2AP48426 406 aaPredicted RBP8.38□□□□□ -1.07
USP15-212ENST00000549237 RIPK4P57078 832 aa8.38□□□□□ -1.07
USP15-212ENST00000549237 TAF7Q15545 349 aaPredicted RBP8.38□□□□□ -1.07
USP15-212ENST00000549237 TTC5Q8N0Z6 440 aa8.38□□□□□ -1.07
USP15-212ENST00000549237 BRCA1P38398 1863 aaKnown RBP8.38□□□□□ -1.07
USP15-212ENST00000549237 NRXN2Q9P2S2 1712 aa8.37□□□□□ -1.07
USP15-212ENST00000549237 COL15A1P39059 1388 aa8.37□□□□□ -1.07
USP15-212ENST00000549237 CHD4Q14839 1912 aa8.37□□□□□ -1.07
USP15-212ENST00000549237 MAPK8IP3Q9UPT6 1336 aa8.37□□□□□ -1.07
USP15-212ENST00000549237 LILRA1O75019 489 aa8.37□□□□□ -1.07
USP15-212ENST00000549237 MMP10P09238 476 aa8.37□□□□□ -1.07
USP15-212ENST00000549237 CANXP27824 592 aaKnown RBP8.37□□□□□ -1.07
USP15-212ENST00000549237 RFC4P35249 363 aa8.37□□□□□ -1.07
USP15-212ENST00000549237 EIF5P55010 431 aaKnown RBP8.37□□□□□ -1.07
USP15-212ENST00000549237 USPL1Q5W0Q7 1092 aa8.37□□□□□ -1.07
USP15-212ENST00000549237 FOXR1Q6PIV2 292 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms