RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 PDE2AO00408 941 aaPredicted RBP5.27□□□□□ -1.57
DEPDC4-204ENST00000547823 F13BP05160 661 aa5.27□□□□□ -1.57
DEPDC4-204ENST00000547823 HOXA10P31260 410 aaPredicted RBP5.27□□□□□ -1.57
DEPDC4-204ENST00000547823 CYP27A1Q02318 531 aa5.27□□□□□ -1.57
DEPDC4-204ENST00000547823 HP1BP3Q5SSJ5 553 aaPredicted RBP5.27□□□□□ -1.57
DEPDC4-204ENST00000547823 CFAP70Q5T0N1 1121 aa5.27□□□□□ -1.57
DEPDC4-204ENST00000547823 XKR5Q6UX68 686 aa5.27□□□□□ -1.57
DEPDC4-204ENST00000547823 TTC16Q8NEE8 873 aa5.27□□□□□ -1.57
DEPDC4-204ENST00000547823 GPR152Q8TDT2 470 aa5.27□□□□□ -1.57
DEPDC4-204ENST00000547823 TMPRSS13Q9BYE2 586 aa5.27□□□□□ -1.57
DEPDC4-204ENST00000547823 SOX13Q9UN79 622 aa5.27□□□□□ -1.57
DEPDC4-204ENST00000547823 CYP26A1O43174 497 aa5.26□□□□□ -1.57
DEPDC4-204ENST00000547823 TIAF1O95411 115 aa5.26□□□□□ -1.57
DEPDC4-204ENST00000547823 C8AP07357 584 aa5.26□□□□□ -1.57
DEPDC4-204ENST00000547823 CES1P23141 567 aa5.26□□□□□ -1.57
DEPDC4-204ENST00000547823 USP11P51784 963 aa5.26□□□□□ -1.57
DEPDC4-204ENST00000547823 SGO2Q562F6 1265 aa5.26□□□□□ -1.57
DEPDC4-204ENST00000547823 FBXL6Q8N531 539 aa5.26□□□□□ -1.57
DEPDC4-204ENST00000547823 TMEM102Q8N9M5 508 aaPredicted RBP5.26□□□□□ -1.57
DEPDC4-204ENST00000547823 C12orf50Q8NA57 414 aaPredicted RBP5.26□□□□□ -1.57
DEPDC4-204ENST00000547823 SLC7A3Q8WY07 619 aa5.26□□□□□ -1.57
DEPDC4-204ENST00000547823 SALL4Q9UJQ4 1053 aa5.26□□□□□ -1.57
DEPDC4-204ENST00000547823 BIN1O00499 593 aa5.25□□□□□ -1.57
DEPDC4-204ENST00000547823 CYP2E1P05181 493 aaPredicted RBP5.25□□□□□ -1.57
DEPDC4-204ENST00000547823 IKBKEQ14164 716 aa5.25□□□□□ -1.57
DEPDC4-204ENST00000547823 BSNDQ8WZ55 320 aa5.25□□□□□ -1.57
DEPDC4-204ENST00000547823 DZANK1Q9NVP4 752 aa5.25□□□□□ -1.57
DEPDC4-204ENST00000547823 NFKBIBQ15653 356 aa5.24□□□□□ -1.57
DEPDC4-204ENST00000547823 EXOSC6Q5RKV6 272 aaKnown RBP5.24□□□□□ -1.57
DEPDC4-204ENST00000547823 DUSP27Q5VZP5 1158 aa5.24□□□□□ -1.57
DEPDC4-204ENST00000547823 ADAMTSL4Q6UY14 1074 aa5.24□□□□□ -1.57
DEPDC4-204ENST00000547823 ZAR1Q86SH2 424 aa5.24□□□□□ -1.57
DEPDC4-204ENST00000547823 STK11IPQ8N1F8 1099 aa5.24□□□□□ -1.57
DEPDC4-204ENST00000547823 FLCNQ8NFG4 579 aa5.24□□□□□ -1.57
DEPDC4-204ENST00000547823 ZFYVE1Q9HBF4 777 aa5.24□□□□□ -1.57
DEPDC4-204ENST00000547823 TMEM63CQ9P1W3 806 aa5.24□□□□□ -1.57
DEPDC4-204ENST00000547823 KANSL3Q9P2N6 904 aa5.24□□□□□ -1.57
DEPDC4-204ENST00000547823 NFKBIEO00221 500 aa5.23□□□□□ -1.57
DEPDC4-204ENST00000547823 MAP7Q14244 749 aa5.23□□□□□ -1.57
DEPDC4-204ENST00000547823 FAM26DQ5JW98 314 aa5.23□□□□□ -1.57
DEPDC4-204ENST00000547823 EZH1Q92800 747 aaPredicted RBP5.23□□□□□ -1.57
DEPDC4-204ENST00000547823 NUDT16Q96DE0 195 aaKnown RBP5.23□□□□□ -1.57
DEPDC4-204ENST00000547823 TBC1D32Q96NH3 1257 aa5.23□□□□□ -1.57
DEPDC4-204ENST00000547823 MKNK1Q9BUB5 465 aa5.23□□□□□ -1.57
DEPDC4-204ENST00000547823 USP26Q9BXU7 913 aa5.23□□□□□ -1.57
DEPDC4-204ENST00000547823 LOC100289279A0A1B0GTE1 492 aa5.22□□□□□ -1.57
DEPDC4-204ENST00000547823 EDN3P14138 238 aa5.22□□□□□ -1.57
DEPDC4-204ENST00000547823 PRKCSHP14314 528 aaPredicted RBP5.22□□□□□ -1.57
DEPDC4-204ENST00000547823 FAM69CQ0P6D2 419 aa5.22□□□□□ -1.57
DEPDC4-204ENST00000547823 KRTAP4-9Q9BYQ8 210 aa5.22□□□□□ -1.57
DEPDC4-204ENST00000547823 PRKAG2Q9UGJ0 569 aa5.22□□□□□ -1.57
DEPDC4-204ENST00000547823 ZMIZ1Q9ULJ6 1067 aa5.22□□□□□ -1.57
DEPDC4-204ENST00000547823 NAA30Q147X3 362 aaPredicted RBP5.21□□□□□ -1.58
DEPDC4-204ENST00000547823 CLP1Q92989 425 aaKnown RBP5.21□□□□□ -1.58
DEPDC4-204ENST00000547823 MISP3Q96FF7 219 aa5.21□□□□□ -1.58
DEPDC4-204ENST00000547823 KRTAP4-2Q9BYR5 136 aa5.21□□□□□ -1.58
DEPDC4-204ENST00000547823 PAK6Q9NQU5 681 aaPredicted RBP5.21□□□□□ -1.58
DEPDC4-204ENST00000547823 CNTN3Q9P232 1028 aa5.21□□□□□ -1.58
DEPDC4-204ENST00000547823 SOX4Q06945 474 aaPredicted RBP5.2□□□□□ -1.58
DEPDC4-204ENST00000547823 PKN1Q16512 942 aa5.2□□□□□ -1.58
DEPDC4-204ENST00000547823 NFXL1Q6ZNB6 911 aa5.2□□□□□ -1.58
DEPDC4-204ENST00000547823 C1orf127Q8N9H9 656 aa5.2□□□□□ -1.58
DEPDC4-204ENST00000547823 C2CD4AQ8NCU7 369 aaPredicted RBP5.2□□□□□ -1.58
DEPDC4-204ENST00000547823 FBLIM1Q8WUP2 373 aa5.2□□□□□ -1.58
DEPDC4-204ENST00000547823 NXPE3Q969Y0 559 aa5.2□□□□□ -1.58
DEPDC4-204ENST00000547823 OSMRQ99650 979 aa5.2□□□□□ -1.58
DEPDC4-204ENST00000547823 BHLHE41Q9C0J9 482 aaPredicted RBP5.2□□□□□ -1.58
DEPDC4-204ENST00000547823 SLC5A6Q9Y289 635 aa5.2□□□□□ -1.58
DEPDC4-204ENST00000547823 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.19□□□□□ -1.58
DEPDC4-204ENST00000547823 SOX1O00570 391 aaPredicted RBP5.19□□□□□ -1.58
DEPDC4-204ENST00000547823 ZBTB39O15060 712 aa5.19□□□□□ -1.58
DEPDC4-204ENST00000547823 ATG7O95352 703 aa5.19□□□□□ -1.58
DEPDC4-204ENST00000547823 MZF1P28698 734 aaPredicted RBP5.19□□□□□ -1.58
DEPDC4-204ENST00000547823 EHHADHQ08426 723 aa5.19□□□□□ -1.58
DEPDC4-204ENST00000547823 CDCA8Q53HL2 280 aa5.19□□□□□ -1.58
DEPDC4-204ENST00000547823 ALKBH2Q6NS38 261 aa5.19□□□□□ -1.58
DEPDC4-204ENST00000547823 VN1R5Q7Z5H4 357 aa5.19□□□□□ -1.58
DEPDC4-204ENST00000547823 SNX29Q8TEQ0 813 aa5.19□□□□□ -1.58
DEPDC4-204ENST00000547823 STK32AQ8WU08 396 aa5.19□□□□□ -1.58
DEPDC4-204ENST00000547823 DBX1A6NMT0 343 aa5.18□□□□□ -1.58
DEPDC4-204ENST00000547823 ADH5P11766 374 aa5.18□□□□□ -1.58
DEPDC4-204ENST00000547823 USP5P45974 858 aa5.18□□□□□ -1.58
DEPDC4-204ENST00000547823 NOM1Q5C9Z4 860 aaKnown RBP5.18□□□□□ -1.58
DEPDC4-204ENST00000547823 CDPF1Q6NVV7 123 aa5.18□□□□□ -1.58
DEPDC4-204ENST00000547823 DDX54Q8TDD1 881 aaKnown RBP5.18□□□□□ -1.58
DEPDC4-204ENST00000547823 HELQQ8TDG4 1101 aa5.18□□□□□ -1.58
DEPDC4-204ENST00000547823 EDEM1Q92611 657 aa5.18□□□□□ -1.58
DEPDC4-204ENST00000547823 ZKSCAN3Q9BRR0 538 aa5.18□□□□□ -1.58
DEPDC4-204ENST00000547823 KRTAP17-1Q9BYP8 105 aa5.18□□□□□ -1.58
DEPDC4-204ENST00000547823 CCDC180Q9P1Z9 1646 aa5.18□□□□□ -1.58
DEPDC4-204ENST00000547823 PHACTR2O75167 634 aa5.17□□□□□ -1.58
DEPDC4-204ENST00000547823 FARP2O94887 1054 aaPredicted RBP5.17□□□□□ -1.58
DEPDC4-204ENST00000547823 PAPLNO95428 1278 aa5.17□□□□□ -1.58
DEPDC4-204ENST00000547823 PDGFAP04085 211 aa5.17□□□□□ -1.58
DEPDC4-204ENST00000547823 CYP11A1P05108 521 aa5.17□□□□□ -1.58
DEPDC4-204ENST00000547823 ESRRAP11474 423 aaPredicted RBP5.17□□□□□ -1.58
DEPDC4-204ENST00000547823 ACPPP15309 386 aa5.17□□□□□ -1.58
DEPDC4-204ENST00000547823 ADMP35318 185 aa5.17□□□□□ -1.58
DEPDC4-204ENST00000547823 HNRNPUQ00839 825 aaKnown RBP eCLIP5.17□□□□□ -1.58
DEPDC4-204ENST00000547823 GSTM4Q03013 218 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms