RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 ADD1P35611 737 aaKnown RBP12.4□□□□□ -0.42
NPAS3-205ENST00000547068 NOM1Q5C9Z4 860 aaKnown RBP12.4□□□□□ -0.42
NPAS3-205ENST00000547068 FSIP1Q8NA03 581 aa12.4□□□□□ -0.42
NPAS3-205ENST00000547068 SDF4Q9BRK5 362 aa12.4□□□□□ -0.42
NPAS3-205ENST00000547068 TAF6LQ9Y6J9 622 aa12.4□□□□□ -0.42
NPAS3-205ENST00000547068 TEX2Q8IWB9 1127 aa12.4□□□□□ -0.42
NPAS3-205ENST00000547068 N4BP2Q86UW6 1770 aaPredicted RBP12.39□□□□□ -0.43
NPAS3-205ENST00000547068 CACNA1FO60840 1977 aa12.39□□□□□ -0.43
NPAS3-205ENST00000547068 LMO7Q8WWI1 1683 aa12.39□□□□□ -0.43
NPAS3-205ENST00000547068 FANCGO15287 622 aa12.39□□□□□ -0.43
NPAS3-205ENST00000547068 HSP90B1P14625 803 aaKnown RBP12.39□□□□□ -0.43
NPAS3-205ENST00000547068 ME1P48163 572 aa12.39□□□□□ -0.43
NPAS3-205ENST00000547068 LEKR1Q6ZMV7 388 aa12.39□□□□□ -0.43
NPAS3-205ENST00000547068 USHBP1Q8N6Y0 703 aa12.39□□□□□ -0.43
NPAS3-205ENST00000547068 IQUBQ8NA54 791 aa12.39□□□□□ -0.43
NPAS3-205ENST00000547068 FMNL2Q96PY5 1086 aa12.39□□□□□ -0.43
NPAS3-205ENST00000547068 FUT8Q9BYC5 575 aa12.39□□□□□ -0.43
NPAS3-205ENST00000547068 PHAXQ9H814 394 aaKnown RBP12.39□□□□□ -0.43
NPAS3-205ENST00000547068 COL5A2P05997 1499 aaPredicted RBP12.39□□□□□ -0.43
NPAS3-205ENST00000547068 DPCR1Q3MIW9 517 aa12.39□□□□□ -0.43
NPAS3-205ENST00000547068 PARD6BQ9BYG5 372 aa12.39□□□□□ -0.43
NPAS3-205ENST00000547068 A0A1B0GUL7 405 aa12.38□□□□□ -0.43
NPAS3-205ENST00000547068 IVLP07476 585 aa12.38□□□□□ -0.43
NPAS3-205ENST00000547068 FOSBP53539 338 aa12.38□□□□□ -0.43
NPAS3-205ENST00000547068 FAM177A1Q8N128 213 aaPredicted RBP12.38□□□□□ -0.43
NPAS3-205ENST00000547068 USP28Q96RU2 1077 aa12.38□□□□□ -0.43
NPAS3-205ENST00000547068 BPIFA3Q9BQP9 254 aa12.38□□□□□ -0.43
NPAS3-205ENST00000547068 ZNF396Q96N95 335 aaPredicted RBP12.38□□□□□ -0.43
NPAS3-205ENST00000547068 UTP14AQ9BVJ6 771 aaKnown RBP12.38□□□□□ -0.43
NPAS3-205ENST00000547068 HMG20BQ9P0W2 317 aa12.38□□□□□ -0.43
NPAS3-205ENST00000547068 RGPD1P0DJD0 1748 aa12.38□□□□□ -0.43
NPAS3-205ENST00000547068 KDRP35968 1356 aa12.38□□□□□ -0.43
NPAS3-205ENST00000547068 PLEKHG2Q9H7P9 1386 aa12.38□□□□□ -0.43
NPAS3-205ENST00000547068 RGPD2P0DJD1 1756 aa12.37□□□□□ -0.43
NPAS3-205ENST00000547068 A0A0D9SFI3 127 aa12.37□□□□□ -0.43
NPAS3-205ENST00000547068 H3BQF6 201 aa12.37□□□□□ -0.43
NPAS3-205ENST00000547068 ZSCAN12O43309 604 aa12.37□□□□□ -0.43
NPAS3-205ENST00000547068 PPP2R3AQ06190 1150 aa12.37□□□□□ -0.43
NPAS3-205ENST00000547068 RAPGEF4Q8WZA2 1011 aa12.37□□□□□ -0.43
NPAS3-205ENST00000547068 MPHOSPH8Q99549 860 aa12.37□□□□□ -0.43
NPAS3-205ENST00000547068 CARD10Q9BWT7 1032 aa12.37□□□□□ -0.43
NPAS3-205ENST00000547068 TTC31Q49AM3 519 aaPredicted RBP12.37□□□□□ -0.43
NPAS3-205ENST00000547068 AACSQ86V21 672 aa12.37□□□□□ -0.43
NPAS3-205ENST00000547068 FMR1NBQ8N0W7 255 aaPredicted RBP12.37□□□□□ -0.43
NPAS3-205ENST00000547068 MRPS27Q92552 414 aaKnown RBP12.37□□□□□ -0.43
NPAS3-205ENST00000547068 SNRKQ9NRH2 765 aa12.37□□□□□ -0.43
NPAS3-205ENST00000547068 KIAA1468Q9P260 1216 aa12.37□□□□□ -0.43
NPAS3-205ENST00000547068 MAP3K9P80192 1104 aa12.36□□□□□ -0.43
NPAS3-205ENST00000547068 LONRF2Q1L5Z9 754 aa12.36□□□□□ -0.43
NPAS3-205ENST00000547068 TSGA10IPQ3SY00 556 aa12.36□□□□□ -0.43
NPAS3-205ENST00000547068 HDGFL1Q5TGJ6 251 aa12.36□□□□□ -0.43
NPAS3-205ENST00000547068 NAA16Q6N069 864 aaPredicted RBP12.36□□□□□ -0.43
NPAS3-205ENST00000547068 Q6ZUG5 572 aa12.36□□□□□ -0.43
NPAS3-205ENST00000547068 RSRC2Q7L4I2 434 aaKnown RBP12.36□□□□□ -0.43
NPAS3-205ENST00000547068 RABGGTAQ92696 567 aa12.36□□□□□ -0.43
NPAS3-205ENST00000547068 CHMP4CQ96CF2 233 aa12.36□□□□□ -0.43
NPAS3-205ENST00000547068 BRMS1Q9HCU9 246 aa12.36□□□□□ -0.43
NPAS3-205ENST00000547068 CCDC9Q9Y3X0 531 aaKnown RBP12.36□□□□□ -0.43
NPAS3-205ENST00000547068 JRKLQ9Y4A0 524 aa12.36□□□□□ -0.43
NPAS3-205ENST00000547068 LMOD1P29536 600 aaPredicted RBP12.36□□□□□ -0.43
NPAS3-205ENST00000547068 MAGEA9P43362 315 aa12.36□□□□□ -0.43
NPAS3-205ENST00000547068 FANCCQ00597 558 aa12.36□□□□□ -0.43
NPAS3-205ENST00000547068 KRT32Q14532 448 aa12.36□□□□□ -0.43
NPAS3-205ENST00000547068 JAKMIP3Q5VZ66 844 aa12.36□□□□□ -0.43
NPAS3-205ENST00000547068 ATL3Q6DD88 541 aa12.36□□□□□ -0.43
NPAS3-205ENST00000547068 FNBP4Q8N3X1 1017 aaPredicted RBP12.36□□□□□ -0.43
NPAS3-205ENST00000547068 FSD1Q9BTV5 496 aa12.36□□□□□ -0.43
NPAS3-205ENST00000547068 VPS18Q9P253 973 aa12.36□□□□□ -0.43
NPAS3-205ENST00000547068 USP21Q9UK80 565 aa12.36□□□□□ -0.43
NPAS3-205ENST00000547068 LRP6O75581 1613 aa12.35□□□□□ -0.43
NPAS3-205ENST00000547068 MYH15Q9Y2K3 1946 aa12.35□□□□□ -0.43
NPAS3-205ENST00000547068 A0A1B0GVL5 298 aa12.35□□□□□ -0.43
NPAS3-205ENST00000547068 VWA3AA6NCI4 1184 aa12.35□□□□□ -0.43
NPAS3-205ENST00000547068 BIN1O00499 593 aa12.35□□□□□ -0.43
NPAS3-205ENST00000547068 TATP17735 454 aaPredicted RBP12.35□□□□□ -0.43
NPAS3-205ENST00000547068 SCRN1Q12765 414 aa12.35□□□□□ -0.43
NPAS3-205ENST00000547068 NEK1Q96PY6 1258 aa12.35□□□□□ -0.43
NPAS3-205ENST00000547068 MRFAP1Q9Y605 127 aa12.35□□□□□ -0.43
NPAS3-205ENST00000547068 PLCH1Q4KWH8 1693 aa12.35□□□□□ -0.43
NPAS3-205ENST00000547068 SLIT2O94813 1529 aa12.35□□□□□ -0.43
NPAS3-205ENST00000547068 NWD2Q9ULI1 1742 aa12.35□□□□□ -0.43
NPAS3-205ENST00000547068 CCDC151A5D8V7 595 aa12.35□□□□□ -0.43
NPAS3-205ENST00000547068 CHRM1P11229 460 aaPredicted RBP12.35□□□□□ -0.43
NPAS3-205ENST00000547068 GNG11P61952 73 aa12.35□□□□□ -0.43
NPAS3-205ENST00000547068 TAF7Q15545 349 aaPredicted RBP12.35□□□□□ -0.43
NPAS3-205ENST00000547068 PACS2Q86VP3 889 aa12.35□□□□□ -0.43
NPAS3-205ENST00000547068 FCHSD1Q86WN1 690 aa12.35□□□□□ -0.43
NPAS3-205ENST00000547068 ERC1Q8IUD2 1116 aa12.35□□□□□ -0.43
NPAS3-205ENST00000547068 SMARCC2Q8TAQ2 1214 aa12.35□□□□□ -0.43
NPAS3-205ENST00000547068 GOLGA1Q92805 767 aa12.35□□□□□ -0.43
NPAS3-205ENST00000547068 SIL1Q9H173 461 aa12.35□□□□□ -0.43
NPAS3-205ENST00000547068 PCDHA7Q9UN72 937 aa12.35□□□□□ -0.43
NPAS3-205ENST00000547068 LOC102724159A0A0B4J2E5 919 aa12.34□□□□□ -0.43
NPAS3-205ENST00000547068 MAP2K7O14733 419 aa12.34□□□□□ -0.43
NPAS3-205ENST00000547068 GUCY2CP25092 1073 aa12.34□□□□□ -0.43
NPAS3-205ENST00000547068 TXLNAP40222 546 aa12.34□□□□□ -0.43
NPAS3-205ENST00000547068 NDUFA8P51970 172 aa12.34□□□□□ -0.43
NPAS3-205ENST00000547068 NCAPHQ15003 741 aa12.34□□□□□ -0.43
NPAS3-205ENST00000547068 PWP2Q15269 919 aaKnown RBP12.34□□□□□ -0.43
NPAS3-205ENST00000547068 AMOTQ4VCS5 1084 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms