RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 PODNQ7Z5L7 613 aa19.2■□□□□ 0.66
TRAFD1-203ENST00000547063 GPR101Q96P66 508 aaPredicted RBP19.2■□□□□ 0.66
TRAFD1-203ENST00000547063 PPIP5K2O43314 1243 aa19.19■□□□□ 0.66
TRAFD1-203ENST00000547063 MAP4K4O95819 1239 aaPredicted RBP19.19■□□□□ 0.66
TRAFD1-203ENST00000547063 ZGPATQ8N5A5 531 aaKnown RBP19.19■□□□□ 0.66
TRAFD1-203ENST00000547063 KBTBD3Q8NAB2 608 aa19.19■□□□□ 0.66
TRAFD1-203ENST00000547063 WDR66Q8TBY9 1149 aa19.19■□□□□ 0.66
TRAFD1-203ENST00000547063 FSD1Q9BTV5 496 aa19.19■□□□□ 0.66
TRAFD1-203ENST00000547063 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.19■□□□□ 0.668e-7■■■■■ 37.5
TRAFD1-203ENST00000547063 SNRKQ9NRH2 765 aa19.19■□□□□ 0.66
TRAFD1-203ENST00000547063 WWC3Q9ULE0 1092 aa19.19■□□□□ 0.66
TRAFD1-203ENST00000547063 ZSCAN25Q6NSZ9 544 aa19.18■□□□□ 0.66
TRAFD1-203ENST00000547063 TMED8Q6PL24 325 aaPredicted RBP19.18■□□□□ 0.66
TRAFD1-203ENST00000547063 IQSEC3Q9UPP2 1182 aaPredicted RBP19.18■□□□□ 0.66
TRAFD1-203ENST00000547063 ZFYP08048 801 aaPredicted RBP19.17■□□□□ 0.66
TRAFD1-203ENST00000547063 AOC3Q16853 763 aa19.17■□□□□ 0.66
TRAFD1-203ENST00000547063 SPTY2D1Q68D10 685 aaPredicted RBP19.17■□□□□ 0.66
TRAFD1-203ENST00000547063 TBC1D22AQ8WUA7 517 aa19.17■□□□□ 0.66
TRAFD1-203ENST00000547063 SALL1Q9NSC2 1324 aa19.17■□□□□ 0.66
TRAFD1-203ENST00000547063 CYP2E1P05181 493 aaPredicted RBP19.16■□□□□ 0.66
TRAFD1-203ENST00000547063 IARSP41252 1262 aaKnown RBP19.16■□□□□ 0.66
TRAFD1-203ENST00000547063 MAP3K12Q12852 859 aa19.16■□□□□ 0.66
TRAFD1-203ENST00000547063 PI16Q6UXB8 463 aa19.16■□□□□ 0.66
TRAFD1-203ENST00000547063 LARGE2Q8N3Y3 721 aa19.16■□□□□ 0.66
TRAFD1-203ENST00000547063 RUFY2Q8WXA3 655 aa19.16■□□□□ 0.66
TRAFD1-203ENST00000547063 DIAPH3Q9NSV4 1193 aa19.16■□□□□ 0.66
TRAFD1-203ENST00000547063 NDUFB9Q9Y6M9 179 aa19.16■□□□□ 0.66
TRAFD1-203ENST00000547063 FAM205AQ6ZU69 1335 aa19.16■□□□□ 0.66
TRAFD1-203ENST00000547063 ECE2O60344 883 aa19.15■□□□□ 0.66
TRAFD1-203ENST00000547063 CHAF1AQ13111 956 aaPredicted RBP19.15■□□□□ 0.66
TRAFD1-203ENST00000547063 DOK7Q18PE1 504 aa19.15■□□□□ 0.66
TRAFD1-203ENST00000547063 EDC3Q96F86 508 aaKnown RBP19.15■□□□□ 0.66
TRAFD1-203ENST00000547063 ZNF277Q9NRM2 450 aaPredicted RBP19.15■□□□□ 0.66
TRAFD1-203ENST00000547063 LRP2BPQ9P2M1 347 aa19.15■□□□□ 0.66
TRAFD1-203ENST00000547063 NFKBIEO00221 500 aa19.14■□□□□ 0.65
TRAFD1-203ENST00000547063 NIM1KQ8IY84 436 aa19.14■□□□□ 0.65
TRAFD1-203ENST00000547063 JDP2Q8WYK2 163 aa19.14■□□□□ 0.65
TRAFD1-203ENST00000547063 ANTXR1Q9H6X2 564 aa19.14■□□□□ 0.65
TRAFD1-203ENST00000547063 IDH1O75874 414 aaKnown RBP19.13■□□□□ 0.65
TRAFD1-203ENST00000547063 CHMLP26374 656 aa19.13■□□□□ 0.65
TRAFD1-203ENST00000547063 TBC1D9Q6ZT07 1266 aa19.13■□□□□ 0.65
TRAFD1-203ENST00000547063 DBNDD1Q9H9R9 158 aa19.13■□□□□ 0.65
TRAFD1-203ENST00000547063 ABCF2Q9UG63 623 aa19.13■□□□□ 0.65
TRAFD1-203ENST00000547063 SUGT1Q9Y2Z0 365 aa19.13■□□□□ 0.65
TRAFD1-203ENST00000547063 COL1A1P02452 1464 aaPredicted RBP19.13■□□□□ 0.65
TRAFD1-203ENST00000547063 DOCK2Q92608 1830 aa19.13■□□□□ 0.65
TRAFD1-203ENST00000547063 MYH7P12883 1935 aa19.13■□□□□ 0.65
TRAFD1-203ENST00000547063 CHD4Q14839 1912 aa19.13■□□□□ 0.65
TRAFD1-203ENST00000547063 RNF113AO15541 343 aaKnown RBP19.12■□□□□ 0.65
TRAFD1-203ENST00000547063 FKBP1AP62942 108 aaKnown RBP19.12■□□□□ 0.65
TRAFD1-203ENST00000547063 C8orf34Q49A92 452 aa19.12■□□□□ 0.65
TRAFD1-203ENST00000547063 TTLL5Q6EMB2 1281 aa19.12■□□□□ 0.65
TRAFD1-203ENST00000547063 ARHGAP27Q6ZUM4 889 aa19.12■□□□□ 0.65
TRAFD1-203ENST00000547063 ERICH6Q7L0X2 663 aa19.12■□□□□ 0.65
TRAFD1-203ENST00000547063 PIH1D3Q9NQM4 214 aaKnown RBP19.12■□□□□ 0.65
TRAFD1-203ENST00000547063 RAD50Q92878 1312 aa19.11■□□□□ 0.65
TRAFD1-203ENST00000547063 GTF2IP78347 998 aa19.11■□□□□ 0.65
TRAFD1-203ENST00000547063 SLC9C2Q5TAH2 1124 aa19.11■□□□□ 0.65
TRAFD1-203ENST00000547063 STRIP1Q5VSL9 837 aa19.11■□□□□ 0.65
TRAFD1-203ENST00000547063 RAI14Q9P0K7 980 aa19.11■□□□□ 0.65
TRAFD1-203ENST00000547063 ZNRF3Q9ULT6 936 aa19.11■□□□□ 0.65
TRAFD1-203ENST00000547063 USP17L3A6NCW0 530 aa19.1■□□□□ 0.65
TRAFD1-203ENST00000547063 USP17L4A6NCW7 530 aa19.1■□□□□ 0.65
TRAFD1-203ENST00000547063 LDHBP07195 334 aaKnown RBP19.1■□□□□ 0.65
TRAFD1-203ENST00000547063 UBE3CQ15386 1083 aa19.1■□□□□ 0.65
TRAFD1-203ENST00000547063 MFSD14BQ5SR56 506 aa19.1■□□□□ 0.65
TRAFD1-203ENST00000547063 USP17L1Q7RTZ2 530 aa19.1■□□□□ 0.65
TRAFD1-203ENST00000547063 BACH2Q9BYV9 841 aa19.1■□□□□ 0.65
TRAFD1-203ENST00000547063 CCDC88AQ3V6T2 1871 aa19.09■□□□□ 0.65
TRAFD1-203ENST00000547063 MAST3O60307 1309 aa19.09■□□□□ 0.65
TRAFD1-203ENST00000547063 GRIN3BO60391 1043 aa19.09■□□□□ 0.65
TRAFD1-203ENST00000547063 LMNB1P20700 586 aa19.09■□□□□ 0.65
TRAFD1-203ENST00000547063 MFAP1P55081 439 aaKnown RBP19.09■□□□□ 0.65
TRAFD1-203ENST00000547063 GSTO1P78417 241 aa19.09■□□□□ 0.65
TRAFD1-203ENST00000547063 GPR162Q16538 588 aa19.09■□□□□ 0.65
TRAFD1-203ENST00000547063 SLF2Q8IX21 1173 aa19.09■□□□□ 0.65
TRAFD1-203ENST00000547063 FBXW7Q969H0 707 aa19.09■□□□□ 0.65
TRAFD1-203ENST00000547063 HELLSQ9NRZ9 838 aa19.09■□□□□ 0.65
TRAFD1-203ENST00000547063 MYO3BQ8WXR4 1341 aa19.08■□□□□ 0.65
TRAFD1-203ENST00000547063 REC8O95072 547 aa19.08■□□□□ 0.64
TRAFD1-203ENST00000547063 PDE6AP16499 860 aa19.08■□□□□ 0.64
TRAFD1-203ENST00000547063 ADD2P35612 726 aa19.08■□□□□ 0.64
TRAFD1-203ENST00000547063 RASSF7Q02833 373 aa19.08■□□□□ 0.64
TRAFD1-203ENST00000547063 ZMYM1Q5SVZ6 1142 aa19.08■□□□□ 0.64
TRAFD1-203ENST00000547063 CWC27Q6UX04 472 aaKnown RBP19.08■□□□□ 0.64
TRAFD1-203ENST00000547063 DZIP1Q86YF9 867 aaKnown RBP19.08■□□□□ 0.64
TRAFD1-203ENST00000547063 APPBP2Q92624 585 aa19.08■□□□□ 0.64
TRAFD1-203ENST00000547063 ESYT1Q9BSJ8 1104 aa19.08■□□□□ 0.64
TRAFD1-203ENST00000547063 PSME4Q14997 1843 aa19.08■□□□□ 0.64
TRAFD1-203ENST00000547063 MAST2Q6P0Q8 1798 aa19.08■□□□□ 0.64
TRAFD1-203ENST00000547063 MYO5AQ9Y4I1 1855 aaKnown RBP19.07■□□□□ 0.64
TRAFD1-203ENST00000547063 LDHCP07864 332 aa19.07■□□□□ 0.64
TRAFD1-203ENST00000547063 YBX3P16989 372 aaKnown RBP eCLIP19.07■□□□□ 0.642e-6■■■■□ 20.1
TRAFD1-203ENST00000547063 NMIQ13287 307 aaPredicted RBP19.07■□□□□ 0.64
TRAFD1-203ENST00000547063 TNIP1Q15025 636 aa19.07■□□□□ 0.64
TRAFD1-203ENST00000547063 MCMDC2Q4G0Z9 681 aa19.07■□□□□ 0.64
TRAFD1-203ENST00000547063 NAA16Q6N069 864 aaPredicted RBP19.07■□□□□ 0.64
TRAFD1-203ENST00000547063 MAGEB6Q8N7X4 407 aa19.07■□□□□ 0.64
TRAFD1-203ENST00000547063 UPF2Q9HAU5 1272 aaKnown RBP19.07■□□□□ 0.64
TRAFD1-203ENST00000547063 SGSM2O43147 1006 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms