RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 UBE2HP62256 183 aa13.59□□□□□ -0.23
CHERP-203ENST00000546361 ZNF397Q8NF99 534 aaPredicted RBP13.59□□□□□ -0.23
CHERP-203ENST00000546361 PLEKHF1Q96S99 279 aa13.59□□□□□ -0.23
CHERP-203ENST00000546361 AATFQ9NY61 560 aaKnown RBP eCLIP13.59□□□□□ -0.23
CHERP-203ENST00000546361 BCS1LQ9Y276 419 aa13.59□□□□□ -0.23
CHERP-203ENST00000546361 SPATA31A3Q5VYP0 1347 aa13.59□□□□□ -0.23
CHERP-203ENST00000546361 TRIM75PA6NK02 468 aa13.59□□□□□ -0.23
CHERP-203ENST00000546361 SPDYE3A6NKU9 549 aa13.59□□□□□ -0.23
CHERP-203ENST00000546361 GIGYF2Q6Y7W6 1299 aaKnown RBP13.59□□□□□ -0.23
CHERP-203ENST00000546361 KRT27Q7Z3Y8 459 aa13.59□□□□□ -0.23
CHERP-203ENST00000546361 ERMNQ8TAM6 284 aa13.59□□□□□ -0.23
CHERP-203ENST00000546361 BRPF3Q9ULD4 1205 aa13.59□□□□□ -0.23
CHERP-203ENST00000546361 ABCC3O15438 1527 aa13.59□□□□□ -0.23
CHERP-203ENST00000546361 PPIP5K2O43314 1243 aa13.59□□□□□ -0.23
CHERP-203ENST00000546361 PCCAP05165 728 aaPredicted RBP13.59□□□□□ -0.23
CHERP-203ENST00000546361 PDE6BP35913 854 aa13.59□□□□□ -0.23
CHERP-203ENST00000546361 IL6STP40189 918 aaPredicted RBP13.59□□□□□ -0.23
CHERP-203ENST00000546361 SYKP43405 635 aa13.59□□□□□ -0.23
CHERP-203ENST00000546361 PROSER3Q2NL68 480 aa13.59□□□□□ -0.23
CHERP-203ENST00000546361 RRP36Q96EU6 259 aaKnown RBP13.59□□□□□ -0.23
CHERP-203ENST00000546361 PYM1Q9BRP8 204 aaKnown RBP13.59□□□□□ -0.23
CHERP-203ENST00000546361 USP26Q9BXU7 913 aa13.59□□□□□ -0.23
CHERP-203ENST00000546361 ENOX2Q16206 610 aaKnown RBP13.58□□□□□ -0.23
CHERP-203ENST00000546361 ARHGAP29Q52LW3 1261 aa13.58□□□□□ -0.23
CHERP-203ENST00000546361 BEND3Q5T5X7 828 aa13.58□□□□□ -0.23
CHERP-203ENST00000546361 SPATA5Q8NB90 893 aa13.58□□□□□ -0.23
CHERP-203ENST00000546361 MARCKSP29966 332 aaPredicted RBP13.58□□□□□ -0.24
CHERP-203ENST00000546361 ZNF165P49910 485 aa13.58□□□□□ -0.24
CHERP-203ENST00000546361 GTF2IP78347 998 aa13.58□□□□□ -0.24
CHERP-203ENST00000546361 KANK3Q6NY19 840 aa13.58□□□□□ -0.24
CHERP-203ENST00000546361 SUPT20HQ8NEM7 779 aa13.58□□□□□ -0.24
CHERP-203ENST00000546361 SSH3Q8TE77 659 aa13.58□□□□□ -0.24
CHERP-203ENST00000546361 ACBD3Q9H3P7 528 aa13.58□□□□□ -0.24
CHERP-203ENST00000546361 MAST3O60307 1309 aa13.58□□□□□ -0.24
CHERP-203ENST00000546361 MAP3K15Q6ZN16 1313 aa13.58□□□□□ -0.24
CHERP-203ENST00000546361 UNC5CLQ8IV45 518 aa13.58□□□□□ -0.24
CHERP-203ENST00000546361 KCNG4Q8TDN1 519 aa13.58□□□□□ -0.24
CHERP-203ENST00000546361 ATP7BP35670 1465 aa13.58□□□□□ -0.24
CHERP-203ENST00000546361 CDR1P51861 262 aa13.57□□□□□ -0.24
CHERP-203ENST00000546361 CCDC181Q5TID7 509 aa13.57□□□□□ -0.24
CHERP-203ENST00000546361 TBC1D22AQ8WUA7 517 aa13.57□□□□□ -0.24
CHERP-203ENST00000546361 EDC3Q96F86 508 aaKnown RBP13.57□□□□□ -0.24
CHERP-203ENST00000546361 RTL9Q8NET4 1388 aa13.57□□□□□ -0.24
CHERP-203ENST00000546361 MTIF2P46199 727 aaKnown RBP13.57□□□□□ -0.24
CHERP-203ENST00000546361 HSP90AA2PQ14568 343 aaPredicted RBP13.57□□□□□ -0.24
CHERP-203ENST00000546361 RUFY3Q7L099 469 aa13.57□□□□□ -0.24
CHERP-203ENST00000546361 NIM1KQ8IY84 436 aa13.57□□□□□ -0.24
CHERP-203ENST00000546361 SEPT12Q8IYM1 358 aa13.57□□□□□ -0.24
CHERP-203ENST00000546361 SYCP3Q8IZU3 236 aa13.57□□□□□ -0.24
CHERP-203ENST00000546361 ZNF408Q9H9D4 720 aa13.57□□□□□ -0.24
CHERP-203ENST00000546361 MYO6Q9UM54 1294 aa13.57□□□□□ -0.24
CHERP-203ENST00000546361 SEC24BO95487 1268 aa13.57□□□□□ -0.24
CHERP-203ENST00000546361 GNA11P29992 359 aa13.57□□□□□ -0.24
CHERP-203ENST00000546361 KIAA1328Q86T90 577 aa13.57□□□□□ -0.24
CHERP-203ENST00000546361 E9PCH4 1651 aa13.57□□□□□ -0.24
CHERP-203ENST00000546361 PTPDC1A2A3K4 754 aa13.57□□□□□ -0.24
CHERP-203ENST00000546361 POTEJP0CG39 1038 aa13.57□□□□□ -0.24
CHERP-203ENST00000546361 TCP10Q12799 353 aa13.57□□□□□ -0.24
CHERP-203ENST00000546361 MFSD14BQ5SR56 506 aa13.57□□□□□ -0.24
CHERP-203ENST00000546361 STXBP4Q6ZWJ1 553 aa13.57□□□□□ -0.24
CHERP-203ENST00000546361 EAF2Q96CJ1 260 aaPredicted RBP13.57□□□□□ -0.24
CHERP-203ENST00000546361 SGSM2O43147 1006 aa13.56□□□□□ -0.24
CHERP-203ENST00000546361 TOP1P11387 765 aaKnown RBP13.56□□□□□ -0.24
CHERP-203ENST00000546361 TRIM21P19474 475 aaKnown RBP13.56□□□□□ -0.24
CHERP-203ENST00000546361 SSR1P43307 286 aaKnown RBP13.56□□□□□ -0.24
CHERP-203ENST00000546361 CETN1Q12798 172 aa13.56□□□□□ -0.24
CHERP-203ENST00000546361 PODXL2Q9NZ53 605 aa13.56□□□□□ -0.24
CHERP-203ENST00000546361 AFMP43652 599 aa13.56□□□□□ -0.24
CHERP-203ENST00000546361 CCDC40Q4G0X9 1142 aa13.56□□□□□ -0.24
CHERP-203ENST00000546361 CPLX3Q8WVH0 158 aa13.56□□□□□ -0.24
CHERP-203ENST00000546361 TBCAO75347 108 aaKnown RBP13.56□□□□□ -0.24
CHERP-203ENST00000546361 ATP5JP18859 108 aa13.56□□□□□ -0.24
CHERP-203ENST00000546361 GYG1P46976 350 aa13.56□□□□□ -0.24
CHERP-203ENST00000546361 DLGAP5Q15398 846 aa13.56□□□□□ -0.24
CHERP-203ENST00000546361 SNX21Q969T3 373 aa13.56□□□□□ -0.24
CHERP-203ENST00000546361 SH2D4AQ9H788 454 aa13.56□□□□□ -0.24
CHERP-203ENST00000546361 ZNF532Q9HCE3 1301 aa13.56□□□□□ -0.24
CHERP-203ENST00000546361 CLTCL1P53675 1640 aa13.55□□□□□ -0.24
CHERP-203ENST00000546361 KIDINS220Q9ULH0 1771 aa13.55□□□□□ -0.24
CHERP-203ENST00000546361 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.55□□□□□ -0.24
CHERP-203ENST00000546361 PRAMEF22A3QJZ6 481 aa13.55□□□□□ -0.24
CHERP-203ENST00000546361 DNM1Q05193 864 aaKnown RBP13.55□□□□□ -0.24
CHERP-203ENST00000546361 LRRC27Q9C0I9 530 aa13.55□□□□□ -0.24
CHERP-203ENST00000546361 A2ML1A8K2U0 1454 aa13.55□□□□□ -0.24
CHERP-203ENST00000546361 B4DLN1 442 aa13.55□□□□□ -0.24
CHERP-203ENST00000546361 DESP17661 470 aa13.55□□□□□ -0.24
CHERP-203ENST00000546361 MRPL12P52815 198 aaKnown RBP13.55□□□□□ -0.24
CHERP-203ENST00000546361 MAPKAPK5Q8IW41 473 aa13.55□□□□□ -0.24
CHERP-203ENST00000546361 PIGBQ92521 554 aa13.55□□□□□ -0.24
CHERP-203ENST00000546361 ABCC4O15439 1325 aa13.55□□□□□ -0.24
CHERP-203ENST00000546361 PARP1P09874 1014 aaKnown RBP13.55□□□□□ -0.24
CHERP-203ENST00000546361 C2CD5Q86YS7 1000 aa13.55□□□□□ -0.24
CHERP-203ENST00000546361 RTL1A6NKG5 1358 aa13.54□□□□□ -0.24
CHERP-203ENST00000546361 VPS36Q86VN1 386 aa13.54□□□□□ -0.24
CHERP-203ENST00000546361 TMEM87BQ96K49 555 aa13.54□□□□□ -0.24
CHERP-203ENST00000546361 GPCPD1Q9NPB8 672 aa13.54□□□□□ -0.24
CHERP-203ENST00000546361 USP25Q9UHP3 1055 aa13.54□□□□□ -0.24
CHERP-203ENST00000546361 TTF2Q9UNY4 1162 aaKnown RBP13.54□□□□□ -0.24
CHERP-203ENST00000546361 CNPY2Q9Y2B0 182 aa13.54□□□□□ -0.24
CHERP-203ENST00000546361 BCORL1Q5H9F3 1711 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms