RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 INTS6LQ5JSJ4 861 aaKnown RBP9.29□□□□□ -0.92
CCDC60-205ENST00000546345 RNF20Q5VTR2 975 aa9.29□□□□□ -0.92
CCDC60-205ENST00000546345 CCDC116Q8IYX3 515 aa9.29□□□□□ -0.92
CCDC60-205ENST00000546345 TMC1Q8TDI8 760 aa9.29□□□□□ -0.92
CCDC60-205ENST00000546345 HPS1Q92902 700 aa9.29□□□□□ -0.92
CCDC60-205ENST00000546345 COG3Q96JB2 828 aa9.29□□□□□ -0.92
CCDC60-205ENST00000546345 ALG2Q9H553 416 aa9.29□□□□□ -0.92
CCDC60-205ENST00000546345 KIF24Q5T7B8 1368 aa9.28□□□□□ -0.92
CCDC60-205ENST00000546345 TONSLQ96HA7 1378 aa9.28□□□□□ -0.92
CCDC60-205ENST00000546345 NR3C2P08235 984 aa9.28□□□□□ -0.92
CCDC60-205ENST00000546345 RFC4P35249 363 aa9.28□□□□□ -0.92
CCDC60-205ENST00000546345 RAB15P59190 212 aa9.28□□□□□ -0.92
CCDC60-205ENST00000546345 DHX9Q08211 1270 aaKnown RBP9.28□□□□□ -0.92
CCDC60-205ENST00000546345 HDGFL1Q5TGJ6 251 aa9.28□□□□□ -0.92
CCDC60-205ENST00000546345 L3MBTL2Q969R5 705 aa9.28□□□□□ -0.92
CCDC60-205ENST00000546345 RASSF10A6NK89 507 aa9.27□□□□□ -0.93
CCDC60-205ENST00000546345 AVPP01185 164 aa9.27□□□□□ -0.93
CCDC60-205ENST00000546345 Q6ZNB5 142 aa9.27□□□□□ -0.93
CCDC60-205ENST00000546345 TERF2IPQ9NYB0 399 aa9.27□□□□□ -0.93
CCDC60-205ENST00000546345 CLSPNQ9HAW4 1339 aa9.27□□□□□ -0.93
CCDC60-205ENST00000546345 PHKG2P15735 406 aa9.26□□□□□ -0.93
CCDC60-205ENST00000546345 TM4SF1P30408 202 aa9.26□□□□□ -0.93
CCDC60-205ENST00000546345 SLFNL1Q499Z3 407 aa9.26□□□□□ -0.93
CCDC60-205ENST00000546345 EMILIN1Q9Y6C2 1016 aa9.26□□□□□ -0.93
CCDC60-205ENST00000546345 TMEM88BA6NKF7 163 aa9.25□□□□□ -0.93
CCDC60-205ENST00000546345 DDNO94850 711 aaPredicted RBP9.25□□□□□ -0.93
CCDC60-205ENST00000546345 WDR4P57081 412 aaKnown RBP9.25□□□□□ -0.93
CCDC60-205ENST00000546345 CTC1Q2NKJ3 1217 aa9.25□□□□□ -0.93
CCDC60-205ENST00000546345 PPP1R26Q5T8A7 1209 aaPredicted RBP9.25□□□□□ -0.93
CCDC60-205ENST00000546345 PGPEP1Q9NXJ5 209 aa9.25□□□□□ -0.93
CCDC60-205ENST00000546345 COL4A5P29400 1685 aa9.24□□□□□ -0.93
CCDC60-205ENST00000546345 MRC1P22897 1456 aa9.24□□□□□ -0.93
CCDC60-205ENST00000546345 ERVH48-1M5A8F1 160 aa9.24□□□□□ -0.93
CCDC60-205ENST00000546345 CRKLP46109 303 aaKnown RBP9.24□□□□□ -0.93
CCDC60-205ENST00000546345 LDHDQ86WU2 507 aa9.24□□□□□ -0.93
CCDC60-205ENST00000546345 RNF135Q8IUD6 432 aa9.24□□□□□ -0.93
CCDC60-205ENST00000546345 ADAMTS19Q8TE59 1207 aa9.24□□□□□ -0.93
CCDC60-205ENST00000546345 CALR3Q96L12 384 aaKnown RBP9.24□□□□□ -0.93
CCDC60-205ENST00000546345 KLF16Q9BXK1 252 aaPredicted RBP9.24□□□□□ -0.93
CCDC60-205ENST00000546345 GGNBP2Q9H3C7 697 aa9.24□□□□□ -0.93
CCDC60-205ENST00000546345 AKAP11Q9UKA4 1901 aa9.24□□□□□ -0.93
CCDC60-205ENST00000546345 WDR33Q9C0J8 1336 aaKnown RBP9.24□□□□□ -0.93
CCDC60-205ENST00000546345 LTBP3Q9NS15 1303 aa9.24□□□□□ -0.93
CCDC60-205ENST00000546345 SIPA1L3O60292 1781 aaPredicted RBP9.24□□□□□ -0.93
CCDC60-205ENST00000546345 FYB1O15117 783 aa9.23□□□□□ -0.93
CCDC60-205ENST00000546345 CAPN5O15484 640 aaPredicted RBP9.23□□□□□ -0.93
CCDC60-205ENST00000546345 ZIC2O95409 532 aaPredicted RBP9.23□□□□□ -0.93
CCDC60-205ENST00000546345 SMCPP49901 116 aaPredicted RBP9.23□□□□□ -0.93
CCDC60-205ENST00000546345 NFIXQ14938 502 aa9.23□□□□□ -0.93
CCDC60-205ENST00000546345 PHTF2Q8N3S3 785 aa9.23□□□□□ -0.93
CCDC60-205ENST00000546345 GLMNQ92990 594 aa9.23□□□□□ -0.93
CCDC60-205ENST00000546345 MCOLN1Q9GZU1 580 aa9.23□□□□□ -0.93
CCDC60-205ENST00000546345 TAF1DQ9H5J8 278 aaPredicted RBP9.23□□□□□ -0.93
CCDC60-205ENST00000546345 AXIN1O15169 862 aa9.22□□□□□ -0.93
CCDC60-205ENST00000546345 TIMP2P16035 220 aa9.22□□□□□ -0.93
CCDC60-205ENST00000546345 INTS5Q6P9B9 1019 aaKnown RBP9.22□□□□□ -0.93
CCDC60-205ENST00000546345 TTLL6Q8N841 843 aa9.22□□□□□ -0.93
CCDC60-205ENST00000546345 ITPKCQ96DU7 683 aa9.22□□□□□ -0.93
CCDC60-205ENST00000546345 TMPRSS4Q9NRS4 437 aa9.22□□□□□ -0.93
CCDC60-205ENST00000546345 TIMELESSQ9UNS1 1208 aa9.22□□□□□ -0.93
CCDC60-205ENST00000546345 SPG7Q9UQ90 795 aa9.22□□□□□ -0.93
CCDC60-205ENST00000546345 SOS1Q07889 1333 aaPredicted RBP9.22□□□□□ -0.93
CCDC60-205ENST00000546345 ZNF541Q9H0D2 1346 aa9.22□□□□□ -0.93
CCDC60-205ENST00000546345 MAP2K1Q02750 393 aaPredicted RBP9.21□□□□□ -0.94
CCDC60-205ENST00000546345 USPL1Q5W0Q7 1092 aa9.21□□□□□ -0.94
CCDC60-205ENST00000546345 TRAF7Q6Q0C0 670 aa9.21□□□□□ -0.94
CCDC60-205ENST00000546345 IFNL2Q8IZJ0 200 aa9.21□□□□□ -0.94
CCDC60-205ENST00000546345 PUS7Q96PZ0 661 aaKnown RBP9.21□□□□□ -0.94
CCDC60-205ENST00000546345 TESK2Q96S53 571 aa9.21□□□□□ -0.94
CCDC60-205ENST00000546345 ZFAND3Q9H8U3 227 aa9.21□□□□□ -0.94
CCDC60-205ENST00000546345 PCDHB11Q9Y5F2 797 aa9.21□□□□□ -0.94
CCDC60-205ENST00000546345 COL15A1P39059 1388 aa9.21□□□□□ -0.94
CCDC60-205ENST00000546345 FMR1Q06787 632 aaKnown RBP eCLIP9.2□□□□□ -0.94
CCDC60-205ENST00000546345 DEFB115Q30KQ5 88 aa9.2□□□□□ -0.94
CCDC60-205ENST00000546345 C2CD5Q86YS7 1000 aa9.2□□□□□ -0.94
CCDC60-205ENST00000546345 CRIPAKQ8N1N5 446 aa9.2□□□□□ -0.94
CCDC60-205ENST00000546345 CCDC85AQ96PX6 553 aaPredicted RBP9.2□□□□□ -0.94
CCDC60-205ENST00000546345 SNED1Q8TER0 1413 aa9.2□□□□□ -0.94
CCDC60-205ENST00000546345 RBBP6Q7Z6E9 1792 aaKnown RBP9.19□□□□□ -0.94
CCDC60-205ENST00000546345 C21orf2O43822 256 aa9.19□□□□□ -0.94
CCDC60-205ENST00000546345 TSGA10IPQ3SY00 556 aa9.19□□□□□ -0.94
CCDC60-205ENST00000546345 AAASQ9NRG9 546 aa9.19□□□□□ -0.94
CCDC60-205ENST00000546345 MKI67P46013 3256 aaKnown RBP9.19□□□□□ -0.94
CCDC60-205ENST00000546345 IQCA1LA6NCM1 817 aa9.18□□□□□ -0.94
CCDC60-205ENST00000546345 ERVV-2B6SEH9 535 aa9.18□□□□□ -0.94
CCDC60-205ENST00000546345 PIK3CDO00329 1044 aa9.18□□□□□ -0.94
CCDC60-205ENST00000546345 PTCD1O75127 700 aaKnown RBP9.18□□□□□ -0.94
CCDC60-205ENST00000546345 SKIP12755 728 aa9.18□□□□□ -0.94
CCDC60-205ENST00000546345 POLR2AP24928 1970 aaKnown RBP9.18□□□□□ -0.94
CCDC60-205ENST00000546345 MAP7D1Q3KQU3 841 aa9.18□□□□□ -0.94
CCDC60-205ENST00000546345 MAP1SQ66K74 1059 aaPredicted RBP9.18□□□□□ -0.94
CCDC60-205ENST00000546345 NFATC2IPQ8NCF5 419 aa9.18□□□□□ -0.94
CCDC60-205ENST00000546345 CAPNS2Q96L46 248 aa9.18□□□□□ -0.94
CCDC60-205ENST00000546345 TAOK3Q9H2K8 898 aa9.18□□□□□ -0.94
CCDC60-205ENST00000546345 DOLKQ9UPQ8 538 aa9.18□□□□□ -0.94
CCDC60-205ENST00000546345 RNF123Q5XPI4 1314 aa9.17□□□□□ -0.94
CCDC60-205ENST00000546345 ST8SIA5O15466 376 aa9.17□□□□□ -0.94
CCDC60-205ENST00000546345 SERPINB2P05120 415 aa9.17□□□□□ -0.94
CCDC60-205ENST00000546345 EAPPQ56P03 285 aaPredicted RBP9.17□□□□□ -0.94
CCDC60-205ENST00000546345 CYP4F22Q6NT55 531 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms