RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 FAM71BQ8TC56 605 aa9.7□□□□□ -0.86
ATXN3-216ENST00000545170 DNAJC8O75937 253 aaPredicted RBP9.69□□□□□ -0.86
ATXN3-216ENST00000545170 HHATQ5VTY9 493 aa9.69□□□□□ -0.86
ATXN3-216ENST00000545170 HVCN1Q96D96 273 aa9.69□□□□□ -0.86
ATXN3-216ENST00000545170 LRPPRCP42704 1394 aaKnown RBP9.69□□□□□ -0.86
ATXN3-216ENST00000545170 INF2Q27J81 1249 aa9.69□□□□□ -0.86
ATXN3-216ENST00000545170 CNGA4Q8IV77 575 aa9.69□□□□□ -0.86
ATXN3-216ENST00000545170 TCP11L1Q9NUJ3 509 aa9.69□□□□□ -0.86
ATXN3-216ENST00000545170 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.69□□□□□ -0.86
ATXN3-216ENST00000545170 SLMAPQ14BN4 828 aa9.69□□□□□ -0.86
ATXN3-216ENST00000545170 CLUL1Q15846 466 aa9.69□□□□□ -0.86
ATXN3-216ENST00000545170 YIPF3Q9GZM5 350 aa9.69□□□□□ -0.86
ATXN3-216ENST00000545170 EEF2P13639 858 aaKnown RBP9.69□□□□□ -0.86
ATXN3-216ENST00000545170 TTC22Q5TAA0 569 aa9.69□□□□□ -0.86
ATXN3-216ENST00000545170 TXNDC16Q9P2K2 825 aa9.69□□□□□ -0.86
ATXN3-216ENST00000545170 USP16Q9Y5T5 823 aa9.69□□□□□ -0.86
ATXN3-216ENST00000545170 WDR97A6NE52 1622 aa9.69□□□□□ -0.86
ATXN3-216ENST00000545170 CCDC194A0A1B0GVG4 234 aa9.69□□□□□ -0.86
ATXN3-216ENST00000545170 TTF2Q9UNY4 1162 aaKnown RBP9.69□□□□□ -0.86
ATXN3-216ENST00000545170 ARHGAP42A6NI28 874 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 MARCKSP29966 332 aaPredicted RBP9.68□□□□□ -0.86
ATXN3-216ENST00000545170 MCM7P33993 719 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 STAT6P42226 847 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 IWS1Q96ST2 819 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 PDE11AQ9HCR9 933 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 ORC3Q9UBD5 711 aaPredicted RBP9.68□□□□□ -0.86
ATXN3-216ENST00000545170 RARSP54136 660 aaKnown RBP9.68□□□□□ -0.86
ATXN3-216ENST00000545170 HNRNPH2P55795 449 aaKnown RBP9.68□□□□□ -0.86
ATXN3-216ENST00000545170 PAK2Q13177 524 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 SEL1L2Q5TEA6 688 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 SYNCQ9H7C4 482 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 CABP2Q9NPB3 220 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 ATAD2Q6PL18 1390 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 PCYT1AP49585 367 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 PPP1R21Q6ZMI0 780 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 IQCA1Q86XH1 822 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 SAMM50Q9Y512 469 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 IDH1O75874 414 aaKnown RBP9.68□□□□□ -0.86
ATXN3-216ENST00000545170 APOEP02649 317 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 ZFXP17010 805 aaPredicted RBP9.68□□□□□ -0.86
ATXN3-216ENST00000545170 INPP1P49441 399 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 STX17P56962 302 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 MRPS9P82933 396 aaKnown RBP9.68□□□□□ -0.86
ATXN3-216ENST00000545170 PLCB3Q01970 1234 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 SYCP3Q8IZU3 236 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 SCINQ9Y6U3 715 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 IFT88Q13099 833 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 MPHOSPH8Q99549 860 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 TRIM6Q9C030 488 aaPredicted RBP9.68□□□□□ -0.86
ATXN3-216ENST00000545170 RNF40O75150 1001 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 TTF1Q15361 905 aaPredicted RBP9.68□□□□□ -0.86
ATXN3-216ENST00000545170 CYP26C1Q6V0L0 522 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 FAM204AQ9H8W3 233 aa9.68□□□□□ -0.86
ATXN3-216ENST00000545170 MTMR3Q13615 1198 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 KLHL14Q9P2G3 628 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 ABCF2Q9UG63 623 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 ZNF213O14771 459 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 ZNF445P59923 1031 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 TNIP1Q15025 636 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 MAP3K21Q5TCX8 1036 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 NUDCD3Q8IVD9 361 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 ANKRD42Q8N9B4 389 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 CENPKQ9BS16 269 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 RBM42Q9BTD8 480 aaKnown RBP9.67□□□□□ -0.86
ATXN3-216ENST00000545170 SEPT10Q9P0V9 454 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 FHOD3Q2V2M9 1422 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 KRT10P13645 584 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 TEX11Q8IYF3 940 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 TRIM31Q9BZY9 425 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 ATG3Q9NT62 314 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 I3L4J1 428 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 ACTN4O43707 911 aaKnown RBP9.67□□□□□ -0.86
ATXN3-216ENST00000545170 MMS22LQ6ZRQ5 1243 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 SECISBP2LQ93073 1101 aaKnown RBP9.67□□□□□ -0.86
ATXN3-216ENST00000545170 UBA7P41226 1012 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 MAGEA9P43362 315 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 PSMD2Q13200 908 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 ANKRD20A3Q5VUR7 823 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 GRAMD4Q6IC98 578 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 IMPACTQ9P2X3 320 aa9.67□□□□□ -0.86
ATXN3-216ENST00000545170 hCG_2014768A0A024R1R8 64 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 IARSP41252 1262 aaKnown RBP9.66□□□□□ -0.86
ATXN3-216ENST00000545170 IRX5P78411 483 aaPredicted RBP9.66□□□□□ -0.86
ATXN3-216ENST00000545170 ZGPATQ8N5A5 531 aaKnown RBP9.66□□□□□ -0.86
ATXN3-216ENST00000545170 RILPQ96NA2 401 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 NEK1Q96PY6 1258 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 SLC26A6Q9BXS9 759 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 ATP6V0A2Q9Y487 856 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 RAD50Q92878 1312 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 MINDY4BA8MYZ0 360 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 SEC31AO94979 1220 aaKnown RBP9.66□□□□□ -0.86
ATXN3-216ENST00000545170 DYNC1I2Q13409 638 aaKnown RBP9.66□□□□□ -0.86
ATXN3-216ENST00000545170 LONRF3Q496Y0 759 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 ANLNQ9NQW6 1124 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 BCAP29Q9UHQ4 241 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 FAM169AQ9Y6X4 670 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.66□□□□□ -0.86
ATXN3-216ENST00000545170 IFIT3O14879 490 aaKnown RBP9.66□□□□□ -0.86
ATXN3-216ENST00000545170 SERPINB6P35237 376 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 CCT6AP40227 531 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms