RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 RASGRF1Q13972 1273 aa19.71■□□□□ 0.75
CHFR-224ENST00000545046 TTLL5Q6EMB2 1281 aa19.71■□□□□ 0.75
CHFR-224ENST00000545046 C3orf67Q6ZVT6 689 aa19.71■□□□□ 0.75
CHFR-224ENST00000545046 CHAMP1Q96JM3 812 aa19.71■□□□□ 0.75
CHFR-224ENST00000545046 NLRP3Q96P20 1036 aa19.71■□□□□ 0.75
CHFR-224ENST00000545046 BCL11BQ9C0K0 894 aaPredicted RBP19.71■□□□□ 0.75
CHFR-224ENST00000545046 QTRT2Q9H974 415 aaKnown RBP19.71■□□□□ 0.75
CHFR-224ENST00000545046 F13A1P00488 732 aa19.7■□□□□ 0.74
CHFR-224ENST00000545046 PDE6AP16499 860 aa19.7■□□□□ 0.74
CHFR-224ENST00000545046 PDCP20941 246 aa19.7■□□□□ 0.74
CHFR-224ENST00000545046 RFC4P35249 363 aa19.7■□□□□ 0.74
CHFR-224ENST00000545046 EXOSC10Q01780 885 aaKnown RBP19.7■□□□□ 0.74
CHFR-224ENST00000545046 BRF1Q92994 677 aa19.7■□□□□ 0.74
CHFR-224ENST00000545046 A0A1B0GUL6 1792 aa19.7■□□□□ 0.74
CHFR-224ENST00000545046 A0A0G2JLW4 131 aa19.7■□□□□ 0.74
CHFR-224ENST00000545046 BCAMP50895 628 aa19.7■□□□□ 0.74
CHFR-224ENST00000545046 TRAPPC3LQ5T215 181 aa19.7■□□□□ 0.74
CHFR-224ENST00000545046 LARP1BQ659C4 914 aaKnown RBP19.7■□□□□ 0.74
CHFR-224ENST00000545046 FOXP2O15409 715 aa19.69■□□□□ 0.74
CHFR-224ENST00000545046 FOXD4L6Q3SYB3 417 aaPredicted RBP19.69■□□□□ 0.74
CHFR-224ENST00000545046 FOXD4L3Q6VB84 417 aaPredicted RBP19.69■□□□□ 0.74
CHFR-224ENST00000545046 GTF3C6Q969F1 213 aa19.69■□□□□ 0.74
CHFR-224ENST00000545046 LRRC2Q9BYS8 371 aa19.69■□□□□ 0.74
CHFR-224ENST00000545046 ZNF213O14771 459 aa19.68■□□□□ 0.74
CHFR-224ENST00000545046 UBE4AQ14139 1066 aa19.68■□□□□ 0.74
CHFR-224ENST00000545046 WWC3Q9ULE0 1092 aa19.68■□□□□ 0.74
CHFR-224ENST00000545046 C4AP0C0L4 1744 aa19.68■□□□□ 0.74
CHFR-224ENST00000545046 MBD3O95983 291 aa19.68■□□□□ 0.74
CHFR-224ENST00000545046 GNL3LQ9NVN8 582 aaKnown RBP19.68■□□□□ 0.74
CHFR-224ENST00000545046 MTMR6Q9Y217 621 aa19.68■□□□□ 0.74
CHFR-224ENST00000545046 COL4A1P02462 1669 aa19.68■□□□□ 0.74
CHFR-224ENST00000545046 TCRBV5S4A2TA0A5A2 114 aa19.67■□□□□ 0.74
CHFR-224ENST00000545046 VPS37CA5D8V6 355 aaPredicted RBP19.67■□□□□ 0.74
CHFR-224ENST00000545046 HAND2P61296 217 aa19.67■□□□□ 0.74
CHFR-224ENST00000545046 AIDAQ96BJ3 306 aa19.67■□□□□ 0.74
CHFR-224ENST00000545046 NPHP1O15259 732 aa19.67■□□□□ 0.74
CHFR-224ENST00000545046 PHF14O94880 888 aa19.67■□□□□ 0.74
CHFR-224ENST00000545046 CAVIN1Q6NZI2 390 aaKnown RBP19.67■□□□□ 0.74
CHFR-224ENST00000545046 FAM196AQ6ZSG2 479 aa19.67■□□□□ 0.74
CHFR-224ENST00000545046 GPT2Q8TD30 523 aa19.67■□□□□ 0.74
CHFR-224ENST00000545046 AGXT2Q9BYV1 514 aa19.67■□□□□ 0.74
CHFR-224ENST00000545046 MINPP1Q9UNW1 487 aa19.67■□□□□ 0.74
CHFR-224ENST00000545046 APPP05067 770 aa19.66■□□□□ 0.74
CHFR-224ENST00000545046 MAGEB6Q8N7X4 407 aa19.66■□□□□ 0.74
CHFR-224ENST00000545046 PFKFB2O60825 505 aa19.66■□□□□ 0.74
CHFR-224ENST00000545046 DTNBO60941 627 aa19.66■□□□□ 0.74
CHFR-224ENST00000545046 MRE11P49959 708 aa19.66■□□□□ 0.74
CHFR-224ENST00000545046 RPS8P62241 208 aaKnown RBP19.66■□□□□ 0.74
CHFR-224ENST00000545046 AMIGO3Q86WK7 504 aa19.66■□□□□ 0.74
CHFR-224ENST00000545046 CELF1Q92879 486 aaKnown RBP19.66■□□□□ 0.74
CHFR-224ENST00000545046 APOBRQ0VD83 1088 aa19.65■□□□□ 0.74
CHFR-224ENST00000545046 CAVIN4Q5BKX8 364 aa19.65■□□□□ 0.74
CHFR-224ENST00000545046 NCOA7Q8NI08 942 aa19.65■□□□□ 0.74
CHFR-224ENST00000545046 CHMP4CQ96CF2 233 aa19.65■□□□□ 0.74
CHFR-224ENST00000545046 RALYLQ86SE5 291 aaKnown RBP19.64■□□□□ 0.74
CHFR-224ENST00000545046 USP48Q86UV5 1035 aa19.64■□□□□ 0.74
CHFR-224ENST00000545046 LLPHQ9BRT6 129 aaKnown RBP19.64■□□□□ 0.74
CHFR-224ENST00000545046 ADRA2BP18089 450 aa19.64■□□□□ 0.73
CHFR-224ENST00000545046 MCM5P33992 734 aa19.64■□□□□ 0.73
CHFR-224ENST00000545046 FBXL16Q8N461 479 aa19.64■□□□□ 0.73
CHFR-224ENST00000545046 ZNF274Q96GC6 653 aaPredicted RBP19.64■□□□□ 0.73
CHFR-224ENST00000545046 STRBPQ96SI9 672 aaKnown RBP19.64■□□□□ 0.73
CHFR-224ENST00000545046 LRP2BPQ9P2M1 347 aa19.64■□□□□ 0.73
CHFR-224ENST00000545046 SCRN1Q12765 414 aa19.63■□□□□ 0.73
CHFR-224ENST00000545046 CHST3Q7LGC8 479 aa19.63■□□□□ 0.73
CHFR-224ENST00000545046 VPS37DQ86XT2 251 aa19.63■□□□□ 0.73
CHFR-224ENST00000545046 TMEM87AQ8NBN3 555 aa19.63■□□□□ 0.73
CHFR-224ENST00000545046 LRRC4BQ9NT99 713 aa19.63■□□□□ 0.73
CHFR-224ENST00000545046 ZNF804BA4D1E1 1349 aa19.63■□□□□ 0.73
CHFR-224ENST00000545046 GYG1P46976 350 aa19.63■□□□□ 0.73
CHFR-224ENST00000545046 TRDNQ13061 729 aa19.63■□□□□ 0.73
CHFR-224ENST00000545046 CSPP1Q1MSJ5 1256 aa19.63■□□□□ 0.73
CHFR-224ENST00000545046 ANKRD2Q9GZV1 360 aa19.63■□□□□ 0.73
CHFR-224ENST00000545046 GRPEL1Q9HAV7 217 aa19.63■□□□□ 0.73
CHFR-224ENST00000545046 CNPY2Q9Y2B0 182 aa19.63■□□□□ 0.73
CHFR-224ENST00000545046 BRWD3Q6RI45 1802 aa19.62■□□□□ 0.73
CHFR-224ENST00000545046 PATL2C9JE40 543 aaKnown RBP19.62■□□□□ 0.73
CHFR-224ENST00000545046 XRCC6P12956 609 aaKnown RBP eCLIP19.62■□□□□ 0.73
CHFR-224ENST00000545046 ALX1Q15699 326 aa19.62■□□□□ 0.73
CHFR-224ENST00000545046 ZSCAN23Q3MJ62 389 aa19.62■□□□□ 0.73
CHFR-224ENST00000545046 CCDC24Q8N4L8 307 aa19.62■□□□□ 0.73
CHFR-224ENST00000545046 GDPD2Q9HCC8 539 aa19.62■□□□□ 0.73
CHFR-224ENST00000545046 NAP1L2Q9ULW6 460 aaPredicted RBP19.62■□□□□ 0.73
CHFR-224ENST00000545046 CARMIL3Q8ND23 1372 aa19.62■□□□□ 0.73
CHFR-224ENST00000545046 PRC1O43663 620 aa19.61■□□□□ 0.73
CHFR-224ENST00000545046 MBD4O95243 580 aa19.61■□□□□ 0.73
CHFR-224ENST00000545046 KRT27Q7Z3Y8 459 aa19.61■□□□□ 0.73
CHFR-224ENST00000545046 MB21D2Q8IYB1 491 aaPredicted RBP19.61■□□□□ 0.73
CHFR-224ENST00000545046 IQSEC3Q9UPP2 1182 aaPredicted RBP19.61■□□□□ 0.73
CHFR-224ENST00000545046 ZNF445P59923 1031 aa19.61■□□□□ 0.73
CHFR-224ENST00000545046 SLC27A3Q5K4L6 730 aa19.61■□□□□ 0.73
CHFR-224ENST00000545046 FAM184AQ8NB25 1140 aa19.61■□□□□ 0.73
CHFR-224ENST00000545046 WDR19Q8NEZ3 1342 aa19.61■□□□□ 0.73
CHFR-224ENST00000545046 UBR3Q6ZT12 1888 aa19.6■□□□□ 0.73
CHFR-224ENST00000545046 JAK2O60674 1132 aa19.6■□□□□ 0.73
CHFR-224ENST00000545046 GNAT2P19087 354 aa19.6■□□□□ 0.73
CHFR-224ENST00000545046 GAS2L3Q86XJ1 694 aa19.6■□□□□ 0.73
CHFR-224ENST00000545046 SMARCC2Q8TAQ2 1214 aa19.6■□□□□ 0.73
CHFR-224ENST00000545046 DENND2AQ9ULE3 1009 aa19.6■□□□□ 0.73
CHFR-224ENST00000545046 KIF3AQ9Y496 699 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms