RNA–Protein interactions for RNA: ENST00000544754.1

LMO3-231, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 555 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-231ENST00000544754 TBC1D9Q6ZT07 1266 aa15.16■□□□□ 0.02
LMO3-231ENST00000544754 RTKN2Q8IZC4 609 aa15.16■□□□□ 0.02
LMO3-231ENST00000544754 SUPT20HQ8NEM7 779 aa15.16■□□□□ 0.02
LMO3-231ENST00000544754 TDRD7Q8NHU6 1098 aaKnown RBP15.16■□□□□ 0.02
LMO3-231ENST00000544754 ZC3H12CQ9C0D7 883 aaKnown RBP15.16■□□□□ 0.02
LMO3-231ENST00000544754 ZNF646O15015 1829 aaPredicted RBP15.15■□□□□ 0.02
LMO3-231ENST00000544754 CCDC88AQ3V6T2 1871 aa15.15■□□□□ 0.02
LMO3-231ENST00000544754 CYP2E1P05181 493 aaPredicted RBP15.15■□□□□ 0.02
LMO3-231ENST00000544754 KBTBD3Q8NAB2 608 aa15.15■□□□□ 0.02
LMO3-231ENST00000544754 PSMD1Q99460 953 aa15.15■□□□□ 0.02
LMO3-231ENST00000544754 SYT17Q9BSW7 474 aa15.15■□□□□ 0.02
LMO3-231ENST00000544754 FSD1Q9BTV5 496 aa15.15■□□□□ 0.02
LMO3-231ENST00000544754 BACH2Q9BYV9 841 aa15.15■□□□□ 0.02
LMO3-231ENST00000544754 CD209Q9NNX6 404 aa15.15■□□□□ 0.02
LMO3-231ENST00000544754 DENND2AQ9ULE3 1009 aa15.15■□□□□ 0.02
LMO3-231ENST00000544754 PSME4Q14997 1843 aa15.15■□□□□ 0.02
LMO3-231ENST00000544754 PDS5AQ29RF7 1337 aaKnown RBP15.15■□□□□ 0.02
LMO3-231ENST00000544754 SCN9AQ15858 1988 aa15.15■□□□□ 0.02
LMO3-231ENST00000544754 RFX7Q2KHR2 1363 aa15.14■□□□□ 0.01
LMO3-231ENST00000544754 FRAT2O75474 233 aaPredicted RBP15.14■□□□□ 0.01
LMO3-231ENST00000544754 IL1R1P14778 569 aa15.14■□□□□ 0.01
LMO3-231ENST00000544754 CHMLP26374 656 aa15.14■□□□□ 0.01
LMO3-231ENST00000544754 COA1Q9GZY4 146 aa15.14■□□□□ 0.01
LMO3-231ENST00000544754 PIH1D3Q9NQM4 214 aaKnown RBP15.14■□□□□ 0.01
LMO3-231ENST00000544754 MAST2Q6P0Q8 1798 aa15.13■□□□□ 0.01
LMO3-231ENST00000544754 KIAA2012Q0VF49 1180 aa15.13■□□□□ 0.01
LMO3-231ENST00000544754 TTF1Q15361 905 aaPredicted RBP15.13■□□□□ 0.01
LMO3-231ENST00000544754 AOC3Q16853 763 aa15.13■□□□□ 0.01
LMO3-231ENST00000544754 CHAF1AQ13111 956 aaPredicted RBP15.12■□□□□ 0.01
LMO3-231ENST00000544754 DOK7Q18PE1 504 aa15.12■□□□□ 0.01
LMO3-231ENST00000544754 COL4A5P29400 1685 aa15.12■□□□□ 0.01
LMO3-231ENST00000544754 G3V3G9 751 aa15.11■□□□□ 0.01
LMO3-231ENST00000544754 NFKBIEO00221 500 aa15.11■□□□□ 0.01
LMO3-231ENST00000544754 PPIP5K2O43314 1243 aa15.11■□□□□ 0.01
LMO3-231ENST00000544754 DCAF8Q5TAQ9 597 aa15.11■□□□□ 0.01
LMO3-231ENST00000544754 CASC1Q6TDU7 716 aa15.11■□□□□ 0.01
LMO3-231ENST00000544754 DBNDD1Q9H9R9 158 aa15.11■□□□□ 0.01
LMO3-231ENST00000544754 ZNF277Q9NRM2 450 aaPredicted RBP15.11■□□□□ 0.01
LMO3-231ENST00000544754 DIAPH3Q9NSV4 1193 aa15.11■□□□□ 0.01
LMO3-231ENST00000544754 JAG2Q9Y219 1238 aa15.11■□□□□ 0.01
LMO3-231ENST00000544754 HIP1O00291 1037 aa15.1■□□□□ 0.01
LMO3-231ENST00000544754 IDH1O75874 414 aaKnown RBP15.1■□□□□ 0.01
LMO3-231ENST00000544754 SEC24BO95487 1268 aa15.1■□□□□ 0.01
LMO3-231ENST00000544754 CHGBP05060 677 aa15.1■□□□□ 0.01
LMO3-231ENST00000544754 NMIQ13287 307 aaPredicted RBP15.1■□□□□ 0.01
LMO3-231ENST00000544754 TICAM2Q86XR7 235 aa15.1■□□□□ 0.01
LMO3-231ENST00000544754 ESYT1Q9BSJ8 1104 aa15.1■□□□□ 0.01
LMO3-231ENST00000544754 VPS33BQ9H267 617 aa15.1■□□□□ 0.01
LMO3-231ENST00000544754 TAOK3Q9H2K8 898 aa15.1■□□□□ 0.01
LMO3-231ENST00000544754 FAM205AQ6ZU69 1335 aa15.1■□□□□ 0.01
LMO3-231ENST00000544754 LTBP3Q9NS15 1303 aa15.1■□□□□ 0.01
LMO3-231ENST00000544754 SALL1Q9NSC2 1324 aa15.1■□□□□ 0.01
LMO3-231ENST00000544754 SBF1O95248 1867 aa15.1■□□□□ 0.01
LMO3-231ENST00000544754 DICER1Q9UPY3 1922 aaKnown RBP15.09■□□□□ 0.01
LMO3-231ENST00000544754 RNF113AO15541 343 aaKnown RBP15.09■□□□□ 0.01
LMO3-231ENST00000544754 ECE2O60344 883 aa15.09■□□□□ 0.01
LMO3-231ENST00000544754 PODNQ7Z5L7 613 aa15.09■□□□□ 0.01
LMO3-231ENST00000544754 WDR66Q8TBY9 1149 aa15.09■□□□□ 0.01
LMO3-231ENST00000544754 FAM227BQ96M60 508 aa15.09■□□□□ 0.01
LMO3-231ENST00000544754 IL25Q9H293 177 aa15.09■□□□□ 0.01
LMO3-231ENST00000544754 ABCF2Q9UG63 623 aa15.09■□□□□ 0.01
LMO3-231ENST00000544754 MYH2Q9UKX2 1941 aa15.08■□□□□ 0
LMO3-231ENST00000544754 A0A0D9SFI3 127 aa15.08■□□□□ 0
LMO3-231ENST00000544754 ZFYP08048 801 aaPredicted RBP15.08■□□□□ 0
LMO3-231ENST00000544754 ADD2P35612 726 aa15.08■□□□□ 0
LMO3-231ENST00000544754 IARSP41252 1262 aaKnown RBP15.08■□□□□ 0
LMO3-231ENST00000544754 GTF2IP78347 998 aa15.08■□□□□ 0
LMO3-231ENST00000544754 RASSF7Q02833 373 aa15.08■□□□□ 0
LMO3-231ENST00000544754 MAP3K12Q12852 859 aa15.08■□□□□ 0
LMO3-231ENST00000544754 LRRFIP1Q32MZ4 808 aaKnown RBP15.08■□□□□ 0
LMO3-231ENST00000544754 SLFNL1Q499Z3 407 aa15.08■□□□□ 0
LMO3-231ENST00000544754 ZSCAN25Q6NSZ9 544 aa15.08■□□□□ 0
LMO3-231ENST00000544754 CWC27Q6UX04 472 aaKnown RBP15.08■□□□□ 0
LMO3-231ENST00000544754 LARGE2Q8N3Y3 721 aa15.08■□□□□ 0
LMO3-231ENST00000544754 RUFY2Q8WXA3 655 aa15.08■□□□□ 0
LMO3-231ENST00000544754 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.08■□□□□ 0
LMO3-231ENST00000544754 LRP2BPQ9P2M1 347 aa15.08■□□□□ 0
LMO3-231ENST00000544754 SGSM2O43147 1006 aa15.07■□□□□ 0
LMO3-231ENST00000544754 PDE6AP16499 860 aa15.07■□□□□ 0
LMO3-231ENST00000544754 PRDX5P30044 214 aa15.07■□□□□ 0
LMO3-231ENST00000544754 ZMYM1Q5SVZ6 1142 aa15.07■□□□□ 0
LMO3-231ENST00000544754 SLC9C2Q5TAH2 1124 aa15.07■□□□□ 0
LMO3-231ENST00000544754 ZGPATQ8N5A5 531 aaKnown RBP15.07■□□□□ 0
LMO3-231ENST00000544754 KCNQ5Q9NR82 932 aa15.07■□□□□ 0
LMO3-231ENST00000544754 RAI14Q9P0K7 980 aa15.07■□□□□ 0
LMO3-231ENST00000544754 YDJCA8MPS7 323 aa15.06■□□□□ 0
LMO3-231ENST00000544754 MFAP1P55081 439 aaKnown RBP15.06■□□□□ 0
LMO3-231ENST00000544754 GRIK5Q16478 980 aa15.06■□□□□ 0
LMO3-231ENST00000544754 SPTY2D1Q68D10 685 aaPredicted RBP15.06■□□□□ 0
LMO3-231ENST00000544754 ERICH6Q7L0X2 663 aa15.06■□□□□ 0
LMO3-231ENST00000544754 MAGEB6Q8N7X4 407 aa15.06■□□□□ 0
LMO3-231ENST00000544754 TBC1D22AQ8WUA7 517 aa15.06■□□□□ 0
LMO3-231ENST00000544754 APPBP2Q92624 585 aa15.06■□□□□ 0
LMO3-231ENST00000544754 FBXW7Q969H0 707 aa15.06■□□□□ 0
LMO3-231ENST00000544754 SEC62Q99442 399 aaKnown RBP15.06■□□□□ 0
LMO3-231ENST00000544754 RAD50Q92878 1312 aa15.06■□□□□ 0
LMO3-231ENST00000544754 ZNF532Q9HCE3 1301 aa15.06■□□□□ 0
LMO3-231ENST00000544754 TCRBV5S4A2TA0A5A2 114 aa15.05■□□□□ -0
LMO3-231ENST00000544754 LDHBP07195 334 aaKnown RBP15.05■□□□□ -0
LMO3-231ENST00000544754 YBX3P16989 372 aaKnown RBP eCLIP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms