RNA–Protein interactions for RNA: ENST00000544258.1

C12orf4-207, Transcript of chromosome 12 open reading frame 4, humanhuman

TSL 3

Gene C12orf4, Length 727 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4-207ENST00000544258 SMG9Q9H0W8 520 aaKnown RBP6.98□□□□□ -1.29
C12orf4-207ENST00000544258 RASSF4Q9H2L5 321 aa6.98□□□□□ -1.29
C12orf4-207ENST00000544258 ABCB6Q9NP58 842 aa6.98□□□□□ -1.29
C12orf4-207ENST00000544258 LATS2Q9NRM7 1088 aa6.98□□□□□ -1.29
C12orf4-207ENST00000544258 NFKBIEO00221 500 aa6.97□□□□□ -1.29
C12orf4-207ENST00000544258 LILRB5O75023 590 aa6.97□□□□□ -1.29
C12orf4-207ENST00000544258 TAF1CQ15572 869 aaPredicted RBP6.97□□□□□ -1.29
C12orf4-207ENST00000544258 PI16Q6UXB8 463 aa6.97□□□□□ -1.29
C12orf4-207ENST00000544258 HFE2Q6ZVN8 426 aa6.97□□□□□ -1.29
C12orf4-207ENST00000544258 TMEM87AQ8NBN3 555 aa6.97□□□□□ -1.29
C12orf4-207ENST00000544258 FAM161BQ96MY7 647 aa6.97□□□□□ -1.29
C12orf4-207ENST00000544258 LPIN3Q9BQK8 851 aa6.97□□□□□ -1.29
C12orf4-207ENST00000544258 BACH2Q9BYV9 841 aa6.97□□□□□ -1.29
C12orf4-207ENST00000544258 SRA1Q9HD15 236 aaKnown RBP6.97□□□□□ -1.29
C12orf4-207ENST00000544258 USP31Q70CQ4 1352 aa6.96□□□□□ -1.29
C12orf4-207ENST00000544258 A0A096LPE4 126 aa6.96□□□□□ -1.3
C12orf4-207ENST00000544258 A0A1W2PPZ6 126 aa6.96□□□□□ -1.3
C12orf4-207ENST00000544258 COL8A1P27658 744 aa6.96□□□□□ -1.3
C12orf4-207ENST00000544258 FCGRTP55899 365 aa6.96□□□□□ -1.3
C12orf4-207ENST00000544258 ATP11AP98196 1134 aa6.96□□□□□ -1.3
C12orf4-207ENST00000544258 WNT8BQ93098 351 aa6.96□□□□□ -1.3
C12orf4-207ENST00000544258 NOC4LQ9BVI4 516 aaKnown RBP6.96□□□□□ -1.3
C12orf4-207ENST00000544258 NAGPAQ9UK23 515 aa6.96□□□□□ -1.3
C12orf4-207ENST00000544258 ALBP02768 609 aa6.95□□□□□ -1.3
C12orf4-207ENST00000544258 CDC27P30260 824 aa6.95□□□□□ -1.3
C12orf4-207ENST00000544258 ZNF76P36508 570 aa6.95□□□□□ -1.3
C12orf4-207ENST00000544258 HNRNPUQ00839 825 aaKnown RBP eCLIP6.95□□□□□ -1.3
C12orf4-207ENST00000544258 PWP1Q13610 501 aa6.95□□□□□ -1.3
C12orf4-207ENST00000544258 PRRT3Q5FWE3 981 aa6.95□□□□□ -1.3
C12orf4-207ENST00000544258 FAM117BQ6P1L5 589 aa6.95□□□□□ -1.3
C12orf4-207ENST00000544258 MAP4K3Q8IVH8 894 aa6.95□□□□□ -1.3
C12orf4-207ENST00000544258 C3orf58Q8NDZ4 430 aa6.95□□□□□ -1.3
C12orf4-207ENST00000544258 ASAP3Q8TDY4 903 aa6.95□□□□□ -1.3
C12orf4-207ENST00000544258 NUDT8Q8WV74 236 aa6.95□□□□□ -1.3
C12orf4-207ENST00000544258 POP1Q99575 1024 aaKnown RBP6.95□□□□□ -1.3
C12orf4-207ENST00000544258 SPOCK3Q9BQ16 436 aa6.95□□□□□ -1.3
C12orf4-207ENST00000544258 CLEC4MQ9H2X3 399 aaPredicted RBP6.95□□□□□ -1.3
C12orf4-207ENST00000544258 JPH1Q9HDC5 661 aaPredicted RBP6.95□□□□□ -1.3
C12orf4-207ENST00000544258 TTF2Q9UNY4 1162 aaKnown RBP6.95□□□□□ -1.3
C12orf4-207ENST00000544258 STARD13Q9Y3M8 1113 aa6.95□□□□□ -1.3
C12orf4-207ENST00000544258 SAMM50Q9Y512 469 aa6.95□□□□□ -1.3
C12orf4-207ENST00000544258 KRBA1A5PL33 1030 aa6.94□□□□□ -1.3
C12orf4-207ENST00000544258 PPP2R3AQ06190 1150 aa6.94□□□□□ -1.3
C12orf4-207ENST00000544258 TRAPPC3LQ5T215 181 aa6.94□□□□□ -1.3
C12orf4-207ENST00000544258 C20orf204Q6ZNR8 217 aa6.94□□□□□ -1.3
C12orf4-207ENST00000544258 C8orf86Q6ZUL3 223 aa6.94□□□□□ -1.3
C12orf4-207ENST00000544258 SV2BQ7L1I2 683 aa6.94□□□□□ -1.3
C12orf4-207ENST00000544258 HS2ST1Q7LGA3 356 aa6.94□□□□□ -1.3
C12orf4-207ENST00000544258 RNF34Q969K3 372 aa6.94□□□□□ -1.3
C12orf4-207ENST00000544258 TRIM11Q96F44 468 aa6.94□□□□□ -1.3
C12orf4-207ENST00000544258 ZNF576Q9H609 170 aa6.94□□□□□ -1.3
C12orf4-207ENST00000544258 IGSF5Q9NSI5 407 aa6.94□□□□□ -1.3
C12orf4-207ENST00000544258 CTSHP09668 335 aa6.93□□□□□ -1.3
C12orf4-207ENST00000544258 GRIA4P48058 902 aa6.93□□□□□ -1.3
C12orf4-207ENST00000544258 ARL4DP49703 201 aa6.93□□□□□ -1.3
C12orf4-207ENST00000544258 TRIM28Q13263 835 aaKnown RBP6.93□□□□□ -1.3
C12orf4-207ENST00000544258 DIEXFQ68CQ4 756 aaKnown RBP6.93□□□□□ -1.3
C12orf4-207ENST00000544258 WFDC8Q8IUA0 241 aa6.93□□□□□ -1.3
C12orf4-207ENST00000544258 SOX17Q9H6I2 414 aaPredicted RBP6.93□□□□□ -1.3
C12orf4-207ENST00000544258 RNF19AQ9NV58 838 aa6.93□□□□□ -1.3
C12orf4-207ENST00000544258 SOX13Q9UN79 622 aa6.93□□□□□ -1.3
C12orf4-207ENST00000544258 AKAP2Q9Y2D5 859 aa6.93□□□□□ -1.3
C12orf4-207ENST00000544258 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.93□□□□□ -1.3
C12orf4-207ENST00000544258 H3BRJ5 948 aa6.92□□□□□ -1.3
C12orf4-207ENST00000544258 ITGB2P05107 769 aa6.92□□□□□ -1.3
C12orf4-207ENST00000544258 ACPPP15309 386 aa6.92□□□□□ -1.3
C12orf4-207ENST00000544258 DTWD1Q8N5C7 304 aa6.92□□□□□ -1.3
C12orf4-207ENST00000544258 TRIM33Q9UPN9 1127 aa6.92□□□□□ -1.3
C12orf4-207ENST00000544258 PPME1Q9Y570 386 aa6.92□□□□□ -1.3
C12orf4-207ENST00000544258 SPATA31C1P0DKV0 1188 aa6.91□□□□□ -1.3
C12orf4-207ENST00000544258 AFF1P51825 1210 aaKnown RBP6.91□□□□□ -1.3
C12orf4-207ENST00000544258 PIP4K2BP78356 416 aa6.91□□□□□ -1.3
C12orf4-207ENST00000544258 FANCCQ00597 558 aa6.91□□□□□ -1.3
C12orf4-207ENST00000544258 PCDH1Q08174 1060 aa6.91□□□□□ -1.3
C12orf4-207ENST00000544258 IKBKEQ14164 716 aa6.91□□□□□ -1.3
C12orf4-207ENST00000544258 SCARA3Q6AZY7 606 aa6.91□□□□□ -1.3
C12orf4-207ENST00000544258 GDF6Q6KF10 455 aaPredicted RBP6.91□□□□□ -1.3
C12orf4-207ENST00000544258 OSGEPQ9NPF4 335 aa6.91□□□□□ -1.3
C12orf4-207ENST00000544258 TMEM39AQ9NV64 488 aa6.91□□□□□ -1.3
C12orf4-207ENST00000544258 APBA3O96018 575 aa6.9□□□□□ -1.3
C12orf4-207ENST00000544258 B3GALT4O96024 378 aa6.9□□□□□ -1.3
C12orf4-207ENST00000544258 PROCP04070 461 aa6.9□□□□□ -1.3
C12orf4-207ENST00000544258 CCDC85BQ15834 202 aaPredicted RBP6.9□□□□□ -1.3
C12orf4-207ENST00000544258 GRIK5Q16478 980 aa6.9□□□□□ -1.3
C12orf4-207ENST00000544258 SPRED3Q2MJR0 410 aa6.9□□□□□ -1.3
C12orf4-207ENST00000544258 HP1BP3Q5SSJ5 553 aaPredicted RBP6.9□□□□□ -1.3
C12orf4-207ENST00000544258 MSL1Q68DK7 614 aa6.9□□□□□ -1.3
C12orf4-207ENST00000544258 IL22RA1Q8N6P7 574 aa6.9□□□□□ -1.3
C12orf4-207ENST00000544258 HHIPQ96QV1 700 aa6.9□□□□□ -1.3
C12orf4-207ENST00000544258 LACRTQ9GZZ8 138 aa6.9□□□□□ -1.3
C12orf4-207ENST00000544258 C1QTNF9BB2RNN3 333 aa6.89□□□□□ -1.31
C12orf4-207ENST00000544258 FAM229AH3BQW9 127 aa6.89□□□□□ -1.31
C12orf4-207ENST00000544258 TRPA1O75762 1119 aa6.89□□□□□ -1.31
C12orf4-207ENST00000544258 NID1P14543 1247 aa6.89□□□□□ -1.31
C12orf4-207ENST00000544258 RPS26P62854 115 aaKnown RBP6.89□□□□□ -1.31
C12orf4-207ENST00000544258 RAC1P63000 192 aa6.89□□□□□ -1.31
C12orf4-207ENST00000544258 AP3B2Q13367 1082 aa6.89□□□□□ -1.31
C12orf4-207ENST00000544258 LDLRAD1Q5T700 205 aa6.89□□□□□ -1.31
C12orf4-207ENST00000544258 VN1R5Q7Z5H4 357 aa6.89□□□□□ -1.31
C12orf4-207ENST00000544258 KLHL23Q8NBE8 558 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms