RNA–Protein interactions for RNA: ENST00000544258.1

C12orf4-207, Transcript of chromosome 12 open reading frame 4, humanhuman

TSL 3

Gene C12orf4, Length 727 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4-207ENST00000544258 AEBP2Q6ZN18 517 aaPredicted RBP21.59■■□□□ 1.05
C12orf4-207ENST00000544258 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
C12orf4-207ENST00000544258 SENP3Q9H4L4 574 aaPredicted RBP18.47■□□□□ 0.55
C12orf4-207ENST00000544258 PHF23Q9BUL5 403 aaPredicted RBP18.23■□□□□ 0.51
C12orf4-207ENST00000544258 FOXD1Q16676 465 aa17.15■□□□□ 0.34
C12orf4-207ENST00000544258 PLPPR3Q6T4P5 718 aa16.72■□□□□ 0.27
C12orf4-207ENST00000544258 PPP6R1Q9UPN7 881 aa16.11■□□□□ 0.17
C12orf4-207ENST00000544258 PIAS4Q8N2W9 510 aaPredicted RBP16.1■□□□□ 0.17
C12orf4-207ENST00000544258 ADRA2BP18089 450 aa16.09■□□□□ 0.17
C12orf4-207ENST00000544258 MSH5O43196 834 aa16.07■□□□□ 0.16
C12orf4-207ENST00000544258 POTEDQ86YR6 584 aa15.42■□□□□ 0.06
C12orf4-207ENST00000544258 SCAF1Q9H7N4 1312 aaKnown RBP14.8□□□□□ -0.04
C12orf4-207ENST00000544258 MAPK8IP2Q13387 824 aaPredicted RBP14.73□□□□□ -0.05
C12orf4-207ENST00000544258 PPP4R3CPQ6ZMV5 832 aa14.69□□□□□ -0.06
C12orf4-207ENST00000544258 DMRT2Q9Y5R5 561 aa14.64□□□□□ -0.07
C12orf4-207ENST00000544258 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
C12orf4-207ENST00000544258 NCBP3Q53F19 620 aaKnown RBP14.32□□□□□ -0.12
C12orf4-207ENST00000544258 HOXD11P31277 338 aaPredicted RBP14.15□□□□□ -0.14
C12orf4-207ENST00000544258 KCNA4P22459 653 aa14.11□□□□□ -0.15
C12orf4-207ENST00000544258 RNF216Q9NWF9 866 aaPredicted RBP14.1□□□□□ -0.15
C12orf4-207ENST00000544258 DCAF8L1A6NGE4 600 aa14.09□□□□□ -0.15
C12orf4-207ENST00000544258 NPM3O75607 178 aaKnown RBP14.02□□□□□ -0.17
C12orf4-207ENST00000544258 CACNB1Q02641 598 aaPredicted RBP13.71□□□□□ -0.21
C12orf4-207ENST00000544258 RNF39Q9H2S5 420 aa13.68□□□□□ -0.22
C12orf4-207ENST00000544258 DNAJC5BQ9UF47 199 aa13.66□□□□□ -0.22
C12orf4-207ENST00000544258 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
C12orf4-207ENST00000544258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.53□□□□□ -0.24
C12orf4-207ENST00000544258 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.25
C12orf4-207ENST00000544258 EHMT2Q96KQ7 1210 aa13.39□□□□□ -0.27
C12orf4-207ENST00000544258 SLC4A2P04920 1241 aa13.25□□□□□ -0.29
C12orf4-207ENST00000544258 U3KPZ7 1027 aaPredicted RBP13.21□□□□□ -0.29
C12orf4-207ENST00000544258 CSRNP3Q8WYN3 585 aa13.12□□□□□ -0.31
C12orf4-207ENST00000544258 FOXD4L1Q9NU39 408 aa13.06□□□□□ -0.32
C12orf4-207ENST00000544258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.03□□□□□ -0.32
C12orf4-207ENST00000544258 HNRNPUL2Q1KMD3 747 aaKnown RBP13.03□□□□□ -0.32
C12orf4-207ENST00000544258 CAPN15O75808 1086 aa13□□□□□ -0.33
C12orf4-207ENST00000544258 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
C12orf4-207ENST00000544258 SPINK5Q9NQ38 1064 aaPredicted RBP12.98□□□□□ -0.33
C12orf4-207ENST00000544258 APLP2Q06481 763 aa12.95□□□□□ -0.34
C12orf4-207ENST00000544258 SAMD1Q6SPF0 538 aaPredicted RBP12.95□□□□□ -0.34
C12orf4-207ENST00000544258 ZBTB22O15209 634 aa12.92□□□□□ -0.34
C12orf4-207ENST00000544258 DSG3P32926 999 aa12.85□□□□□ -0.35
C12orf4-207ENST00000544258 TRHP20396 242 aaPredicted RBP12.82□□□□□ -0.36
C12orf4-207ENST00000544258 ZNF219Q9P2Y4 722 aaPredicted RBP12.81□□□□□ -0.36
C12orf4-207ENST00000544258 ABCB7O75027 752 aa12.69□□□□□ -0.38
C12orf4-207ENST00000544258 ATXN8OSP0DMR3 200 aa12.63□□□□□ -0.39
C12orf4-207ENST00000544258 ATF5Q9Y2D1 282 aaPredicted RBP12.6□□□□□ -0.39
C12orf4-207ENST00000544258 POLA2Q14181 598 aa12.51□□□□□ -0.41
C12orf4-207ENST00000544258 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
C12orf4-207ENST00000544258 ZBTB12Q9Y330 459 aaPredicted RBP12.32□□□□□ -0.44
C12orf4-207ENST00000544258 FBLN2P98095 1184 aa12.2□□□□□ -0.46
C12orf4-207ENST00000544258 POTEHQ6S545 545 aa12.13□□□□□ -0.47
C12orf4-207ENST00000544258 OSCARQ8IYS5 282 aa12.08□□□□□ -0.48
C12orf4-207ENST00000544258 AKT1S1Q96B36 256 aa12.04□□□□□ -0.48
C12orf4-207ENST00000544258 MKRN4PQ13434 485 aaPredicted RBP12.03□□□□□ -0.48
C12orf4-207ENST00000544258 CHRDL2Q6WN34 429 aa11.96□□□□□ -0.49
C12orf4-207ENST00000544258 SPDYE2BA6NHP3 402 aa11.94□□□□□ -0.5
C12orf4-207ENST00000544258 SPDYE6P0CI01 402 aa11.94□□□□□ -0.5
C12orf4-207ENST00000544258 SPDYE2Q495Y8 402 aa11.94□□□□□ -0.5
C12orf4-207ENST00000544258 REM2Q8IYK8 340 aaPredicted RBP11.9□□□□□ -0.5
C12orf4-207ENST00000544258 ZNF692Q9BU19 519 aaPredicted RBP11.89□□□□□ -0.51
C12orf4-207ENST00000544258 FKBP8Q14318 412 aa11.88□□□□□ -0.51
C12orf4-207ENST00000544258 PITPNM1O00562 1244 aa11.77□□□□□ -0.53
C12orf4-207ENST00000544258 SSUH2Q9Y2M2 353 aa11.77□□□□□ -0.53
C12orf4-207ENST00000544258 SPDYE4A6NLX3 237 aa11.76□□□□□ -0.53
C12orf4-207ENST00000544258 PABPN1Q86U42 306 aaKnown RBP eCLIP11.71□□□□□ -0.53
C12orf4-207ENST00000544258 PIP4P2Q8N4L2 257 aa11.69□□□□□ -0.54
C12orf4-207ENST00000544258 SPDYE1Q8NFV5 336 aaPredicted RBP11.67□□□□□ -0.54
C12orf4-207ENST00000544258 CLEC11AQ9Y240 323 aa11.65□□□□□ -0.54
C12orf4-207ENST00000544258 FXR2P51116 673 aaKnown RBP eCLIP11.64□□□□□ -0.55
C12orf4-207ENST00000544258 FBXO3Q9UK99 471 aa11.56□□□□□ -0.56
C12orf4-207ENST00000544258 PRR29P0C7W0 189 aa11.51□□□□□ -0.57
C12orf4-207ENST00000544258 PROM2Q8N271 834 aa11.51□□□□□ -0.57
C12orf4-207ENST00000544258 STAG3Q9UJ98 1225 aa11.51□□□□□ -0.57
C12orf4-207ENST00000544258 PRKAR2AP13861 404 aaKnown RBP11.49□□□□□ -0.57
C12orf4-207ENST00000544258 HAX1O00165 279 aa11.48□□□□□ -0.57
C12orf4-207ENST00000544258 AMER1Q5JTC6 1135 aaPredicted RBP11.47□□□□□ -0.57
C12orf4-207ENST00000544258 SP7Q8TDD2 431 aaPredicted RBP11.43□□□□□ -0.58
C12orf4-207ENST00000544258 CHADLQ6NUI6 762 aa11.37□□□□□ -0.59
C12orf4-207ENST00000544258 VASPP50552 380 aaPredicted RBP11.27□□□□□ -0.61
C12orf4-207ENST00000544258 EVX2Q03828 476 aa11.27□□□□□ -0.61
C12orf4-207ENST00000544258 C19orf67A6NJJ6 358 aa11.26□□□□□ -0.61
C12orf4-207ENST00000544258 RTN4Q9NQC3 1192 aaKnown RBP11.26□□□□□ -0.61
C12orf4-207ENST00000544258 PLEKHG5O94827 1062 aa11.23□□□□□ -0.61
C12orf4-207ENST00000544258 CREBZFQ9NS37 354 aa11.23□□□□□ -0.61
C12orf4-207ENST00000544258 FARP1Q9Y4F1 1045 aaPredicted RBP11.23□□□□□ -0.61
C12orf4-207ENST00000544258 MIER1Q8N108 512 aa11.22□□□□□ -0.61
C12orf4-207ENST00000544258 PLCD3Q8N3E9 789 aa11.19□□□□□ -0.62
C12orf4-207ENST00000544258 CD44P16070 742 aaKnown RBP11.14□□□□□ -0.63
C12orf4-207ENST00000544258 NPM1P06748 294 aaKnown RBP eCLIP11.13□□□□□ -0.63
C12orf4-207ENST00000544258 ZBTB47Q9UFB7 747 aaPredicted RBP11.08□□□□□ -0.64
C12orf4-207ENST00000544258 GABBR2O75899 941 aa11.07□□□□□ -0.64
C12orf4-207ENST00000544258 IFNLR1Q8IU57 520 aaPredicted RBP11.06□□□□□ -0.64
C12orf4-207ENST00000544258 MNX1P50219 401 aaPredicted RBP11.04□□□□□ -0.64
C12orf4-207ENST00000544258 PAK3O75914 559 aaPredicted RBP11.02□□□□□ -0.65
C12orf4-207ENST00000544258 KLHL34Q8N239 644 aa11.02□□□□□ -0.65
C12orf4-207ENST00000544258 ZRANB1Q9UGI0 708 aa11□□□□□ -0.65
C12orf4-207ENST00000544258 CLCN6P51797 869 aa10.99□□□□□ -0.65
C12orf4-207ENST00000544258 SPOCK2Q92563 424 aa10.99□□□□□ -0.65
C12orf4-207ENST00000544258 ZNF579Q8NAF0 562 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms